Array 1 74173-71497 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAHY01000008.1 Lactobacillus sp. DS9_6 DS9_6_8_length_119707_cov_27.791144, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 74172 36 100.0 30 .................................... TACAACGAAGCCATTCGGAAATTAGCAGCG 74106 36 100.0 30 .................................... TTGCTCATATTGGAATCAATGTCTTTCGCG 74040 36 100.0 30 .................................... CAGTAGCAACATAAACCCTAGTACCAATAA 73974 36 100.0 30 .................................... CAACCTTACAGAAGTTCTTCAAGAGCGGTT 73908 36 100.0 30 .................................... GGACGAGCAAATCTAACCGCTTCGGGCCAA 73842 36 100.0 30 .................................... CCGAAGGATAAGCCAATATTTGTACCAGAC 73776 36 100.0 30 .................................... GACTTCGAATGCTGAAGAACTAGCTGATCA 73710 36 100.0 30 .................................... GGGGCACCTCGATATACGGGTACCCCATCT 73644 36 100.0 30 .................................... CGAATTTAAGACGATGAAACTGCCGTATGG 73578 36 100.0 30 .................................... AGAGTTTATTCAGCATGATAGTACCAAATT 73512 36 100.0 30 .................................... TCAAATAGCCTCTTCGAAAGTTAAAGGAGG 73446 36 100.0 30 .................................... AGCGTGGCGTAGCGCTAACTTGTCATTTTT 73380 36 100.0 30 .................................... AAAAATTGGGGATTGGCAAGATTACGACTG 73314 36 100.0 30 .................................... TATTTCGCACTTCCAAAATCATAGCCATCA 73248 36 100.0 30 .................................... CGCCTGAACATTGCATCGATGGTTTGATCA 73182 36 100.0 30 .................................... GTTGGTGGCAGCGATTCATTGCTGACGTCC 73116 36 100.0 30 .................................... AACAATTGAAGCGGTGGAAGCTATAGCCGC 73050 36 100.0 30 .................................... ACGTCGCCGCGAATTTTCCGCATTACCGTA 72984 36 100.0 30 .................................... TCGACAATTGTGACACGGGTTTCAACGTCA 72918 36 100.0 30 .................................... AACGGTGCTGCCAACTGGGTGCTCGCGCGC 72852 36 100.0 30 .................................... TTGAGTTCTGATTGTTAGTTGTATCTTGGT 72786 36 100.0 30 .................................... CTTCATCTAATGATGAATTAACTAACAAGT 72720 36 100.0 30 .................................... AACGGTGCTGCCAACTGGGTGCTCGCGCGC 72654 36 100.0 30 .................................... CTAACCACTGGACTGGCTGGAGGGGTCGCC 72588 36 100.0 30 .................................... CATCGTACCCTCACAAAAGCTAACGCCGGC 72522 36 100.0 30 .................................... CTTTTATGAAGAACTGTTTACACCGGTTAT 72456 36 100.0 30 .................................... TCTTCAAGGTCTTGTGTGGCAATAGCGTTT 72390 36 100.0 30 .................................... TCAATATAACTCGCATCATAATCAAGATTA 72324 36 100.0 30 .................................... AAGGTGAGCAAATCTTTGATGTTAGTCAGC 72258 36 100.0 30 .................................... ATCTCACTGATGTTATCGGCGATTTACGAG 72192 36 100.0 30 .................................... GGGATTGTGGGCTGACGATAGATATACGCT 72126 36 100.0 30 .................................... CTAACCTTGGCTGTGAATACTGGAGGCGTC 72060 36 100.0 30 .................................... GTAAAACCATCATTCGTCTTGGAGTCAATC 71994 36 100.0 30 .................................... CATATTGACGTTGTGAACGTTGCATTTCTG 71928 36 100.0 30 .................................... CTTACGTCAACGGTTATACCGTGCGCAAGG 71862 36 100.0 30 .................................... AAGGGTTAGCGCCACTTAATCCTGACAACT 71796 36 97.2 30 ................................A... AAAGGCTTACGTTCAGGCGATTGAATCCGG 71730 36 100.0 30 .................................... ACCCAGTTTCCTCGTTGCGCAGATGTTTGT 71664 36 100.0 30 .................................... CCGAGAAGGTCGGACGATCAACTACTTTCG 71598 36 100.0 30 .................................... AGGAAATTCGAGTTCTTCCCGCAATTGATG 71532 36 83.3 0 C.............C..............G..TTC. | ========== ====== ====== ====== ==================================== ============================== ================== 41 36 99.5 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGTGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAATCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCCAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTCATTCTCATCGAGTTCTCAAAAGTGAACCGAAAGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGTGAACTAGATTGATTAGGAGATTGTGTGAAAACAACG # Right flank : AAACAGCAGTGAGACTAAACTGAAGCTAAACTTGTCAAAAAGTGCCTCATTTTGTGACAAAATAAGGTGTTTCACTATTTATTGTGTGAACCAAGCCTCAATATTTACAAAGCTGAACCTTTCAACGTTCAGCTTAAAAGCCGCCGTCTAAAGCAATATCGTAGTAACCACATACACTCATGCGGTGATATATCAATCAAAAACTAAGTGCTATCTAACTCCTCTTGTGATAGAATTCATTATATATGAAATCGCTTACACAACGAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGCGCCACACTTTTGGTCAGCATGGGGTTGGCCGCATGTAGTAGTGGATCGAGCTCTAGTTCGAGCAAGAGCAGCAGCACGACTAGCCAGACGAGCAATGCTAAGGTGAAGATTAATACCGGCGCCGATGCGAGTGCCAAGGTGCCGGCAGCCGGCACCTTAGTGATGCGTCAGCTTTATGCTGCACCACACGGCAAGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //