Array 1 1060-3709 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGKSL010000032.1 Klebsiella pneumoniae strain UTI_PT4 NODE_32_length_60730_cov_4.77806, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1060 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 1121 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 1182 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 1243 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 1305 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 1366 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 1427 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 1488 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 1549 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 1610 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 1671 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 1732 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 1793 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 1854 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 1915 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 1976 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 2037 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 2098 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 2159 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 2220 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 2281 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 2342 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 2403 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 2464 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 2525 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 2586 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 2647 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 2708 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 2769 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 2830 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 2891 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 2952 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 3013 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 3074 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 3135 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 3196 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 3257 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 3318 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 3379 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3440 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3501 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3562 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3623 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3681 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //