Array 1 294125-296663 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUMG01000003.1 Delftia sp. CH05 scaffold3.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 294125 28 100.0 32 ............................ TTTGCCGAAGCTGCCCCAGGTCGGCAGGTCAG 294185 28 100.0 32 ............................ ATCGCCCAGGAGGTCGAGTCCAAAGTCCGCGC 294245 28 100.0 32 ............................ TCCAGCTCATCCGTCTCTGCGCGCTTGAGGAT 294305 28 100.0 32 ............................ GAAGCAGGCGCCTGTCAAGCGCTCGCGCAGGG 294365 28 100.0 32 ............................ CACGAATGCCAACAGGTGCTGCGCCATGCCGA 294425 28 100.0 32 ............................ ACAACCCCACGCGCTTGGCCTTGGCCTCCTGC 294485 28 100.0 32 ............................ TACCAGAAGGCCAAGATGTACAAGGAGTTGCA 294545 28 100.0 32 ............................ AGCGCGAGATGGCATTCCAGCAATGGAAGCCC 294605 28 100.0 32 ............................ TTGAGGGCTGGTCCCAGATCGTCACGTCTGAG 294665 28 100.0 32 ............................ ATGGATAGTGGACCTGCAAGCATACGCTCGCC 294725 28 100.0 32 ............................ GCGCGGCGCTGGGCTCTGTTGAGTTCCATGGT 294785 28 100.0 32 ............................ ATGAAAAAGCCCCGACTAGCGGGGCTGGGGTT 294845 28 100.0 33 ............................ TGGGCTACACGCTGCGTGCGGGCGTCGATGCGG 294906 28 100.0 32 ............................ TATGTGATGCTCACGGACATCGAGTGCCCTGG 294966 28 100.0 32 ............................ TGATGAACTCCTCGGTACAGTCAAAGCGCGTC 295026 28 100.0 32 ............................ TGGGCGCGCTGCTTCCGTTCCCATGCCTCGAT 295086 28 100.0 32 ............................ ACCAGGATGCGAGGCCGCCGAGCAAGGCCGTT 295146 28 100.0 32 ............................ AAAGAGCATTGGCAAGGTCCGTGCCGCGCAAG 295206 28 100.0 32 ............................ GCGCACTCGGCCTCGCTCGAAAACAGCAGCTC 295266 28 100.0 33 ............................ CTCCAGGCTACGTGCGCCTACAGCACCTATCTC 295327 28 100.0 32 ............................ TCGAAGGCCCGCACGAACTTGCTCGGGCTGTC 295387 28 100.0 32 ............................ CAGCATGGCGCCCGCGTTCCCGATCCGCTTTG 295447 28 100.0 32 ............................ TCATCACAAGCATCGAGCCTGAATGCTGGGCT 295507 28 100.0 32 ............................ AGGCGGCGGTGCTGGCGCGACATACACCCACA 295567 28 100.0 32 ............................ TGCGATCTTGAGCAATTCCGCTGCCTGCTCTT 295627 28 100.0 32 ............................ AACAAGTTCCACAAGCCAGCTGCCACTGGTGG 295687 28 100.0 32 ............................ ATTGGCTGGGTCGGCGCTGCGTCGATGCTCTA 295747 28 100.0 32 ............................ AGGAGGTCCAGATGATCACCCCTCAAGCAACC 295807 28 100.0 20 ............................ AGCCTATCGGATCGTGGAAG Deletion [295855] 295855 28 100.0 32 ............................ AGGGCCTGCCACTTCCTGGAAATCAAGGATCT 295915 28 100.0 32 ............................ TCCAGGGCCGGCACGATGCCGCCGCCCATGAT 295975 28 100.0 32 ............................ ATCGAGGACGGCACGCTGCGGGACTATCTGAT 296035 28 100.0 33 ............................ TGCACAAAGGCCAGGCGCACCCACGTTTTCCAC 296096 28 100.0 32 ............................ TCTTCAAGCTCATCCTCTTCCGCATCCGGTTG 296156 28 100.0 32 ............................ TTGCGCAGATCTGCATTGGCTTGAGCCTGGGC 296216 28 100.0 32 ............................ ATACCCTCCTCTGGTCGTGACCAGCAGGCCCG 296276 28 100.0 32 ............................ GAGCTGCGGCAATTTCGCGGTGGCAGATCCGC 296336 28 100.0 32 ............................ ATCAGATGGCACCTTTCACAATGAGATTGAGA 296396 28 96.4 32 .....T...................... CGTCACACGCACGTCAGGCGAGACTCGCTCAC 296456 28 100.0 32 ............................ AACACCCTCCGACGCGGAGCGCCTGGCCCGAG 296516 28 96.4 32 A........................... CAGGGCCTCGGTGGCATCGCTGCATGCCTGGG 296576 28 96.4 32 ......C..................... CCAAGGAAGCCTCATGACAGCAACCAAGATCC 296636 28 89.3 0 ....T....T..G............... | ========== ====== ====== ====== ============================ ================================= ================== 43 28 99.5 32 GTTCGCTGCCGCATAGGCAGCTCAGAAA # Left flank : CGCGCTGCGCGGCCTGATGGAACAGCCCTGGCTGCAGGGCATGCGCGATCACGTGCACTGCACGCCGCCAGCTTTGGTGCCAGAGGGCGCCGTGCCCTGCCTGGTGCAACGCCGGCAATTCAAGACCAGCCCCGACCGCCTGCGCCGCCGCCGCATGCGGCGCAAGGGAGAAACCGCCGAACAGGCCGCGGCCGCCATCCCCGACAGCGTGGAGCGCACCCCGGACCTGCCCTACGTTCAACTGCGCAGCGCCAGCACCGGCCAGCCGTTTTGCCTGTTCGTGGAGCAGAAAGCGGTGCAGGGCACGGCGGGCCAGGAAGGCTTCAACACCTACGGGCTGAGCCTGGGAACTGCTGTTCCCTGGTTCTGACCCTTTTTCTGGCGGCCTGTGGGGTCGCCTTTCAAATCAACAACTTGGCGACGCCTCGGAATTTTGGGGTGTTTTCGGGTTAGGGGGGAAAGTTCTTTAAAAATCAATGAATTGGGAGGATTTTTGTCTA # Right flank : AGGCTGCTGACTTGGAGGCGACAGAGAAGCCTCTGCATTCAACCTTCCGGGCCATGCTCCGCGTATTCCACAAAGGACGGTGCTTCATCAAACAGTTGCAAGAGCAGTTTCAGGCGCCGGGCGTAGAGGCTCTGTGGCCGGTTGAAGGCCTGGGCTGCCAGGGCGATGGCTGCGCGGGCGAGGTACCACTCGTTGTCGAATTCACTGGCGTCCTCGAATACCTTGTGCCGGATTTGCCGGATGTGGTTCAGCGCCAGGTCTGCAGCCAGATCCACCTCTACATCCGCGTCATGCCAGTCCATGTCGGCACAGCGTGTTTCGATCAGGGCAACCAGCCCCCTCTCTGCGCGGGCAATGGACAGGGCGATCATTTGCTGCATGGTGGGCCAGGCAGCGGTGTCCATCGTGCAGGGCTTGTTCGTTGAGTGCCGTGACGCAGCCATATCGATTCCTTTGTCGTCGCTTCAATGACTCGGGCTTTCTATGCACGATCTATGCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //