Array 1 235747-232370 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMNR01000002.1 Yeosuana aromativorans strain JCM 12862 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ================================ ================== 235746 45 87.0 30 C..T.TT..A-................................... ACAAATGTACATACAAAGTATTAACAGTAT 235671 46 100.0 30 .............................................. TAAATCAATGAACTCTTGAACGGCTTTTTT 235595 46 100.0 30 .............................................. TTAACGGTGAAGATAGACGTAGAGGGCTTA 235519 46 100.0 30 .............................................. GAATATAAACCAATATTAAAGACCAAACGC 235443 46 100.0 29 .............................................. ACATCAGTGGCTGTTACAAATTTATTGGT 235368 46 100.0 30 .............................................. TCTTGAAGTTTACATTAAATAATTAAGATA 235292 46 100.0 30 .............................................. GCCACATGTTTTTAATGACGATTACACCAG 235216 46 100.0 29 .............................................. AGGCGTTGCTTTTAAGCTTTGTGGCTGTA 235141 46 100.0 30 .............................................. GAAAATCAAGATCCTTAATTGATCAAATAA 235065 46 100.0 30 .............................................. TTTGCCCATGTACCAAAATGACCAGACCCC 234989 46 100.0 30 .............................................. CAAGGCCTTGGTAAGACACTCCAGTCCATT 234913 46 100.0 30 .............................................. TATGACCCTTTTTTGAGTGACGAATGGAAT 234837 46 100.0 20 .............................................. AATCAAATCGTAACAAATCA Deletion [234772] 234771 46 100.0 30 .............................................. TAAATAAAGATGGTGATTTGGTCATGTTTA 234695 46 100.0 30 .............................................. TTAATGGTAGTTTTGATATTTTTATACTTA 234619 46 100.0 32 .............................................. TATCCGTCCAATGCTATAGGGTACCTCAATTT 234541 46 100.0 29 .............................................. GTAAAGGTATTTTTGATAATAAAACCCTA 234466 46 100.0 30 .............................................. TTGATTTACCACGTTTGGAAAGTTGCACAT 234390 46 100.0 30 .............................................. ATATGCTTGAATCAGAAAAAAGTAAGCTAG 234314 46 97.8 30 ............................................A. TGAAAGAAGTGGTCAATGCTTTAAATTCAT 234238 46 100.0 30 .............................................. AGATTGTAAAAAAGGCAAATTGCCAAGCCT 234162 46 100.0 30 .............................................. CGAAATCACAAGAAAGGCACAATGCCACAG 234086 46 100.0 30 .............................................. CTGCGGCTGACTTTACAAGTCCATCAGCAG 234010 46 100.0 30 .............................................. TTTGCTAGAAGCCTTGATTTTTGAGGAACA 233934 46 100.0 30 .............................................. AAGTGCTGGTATCTATATATGGAAACGATT 233858 46 100.0 30 .............................................. TCATCAGCCGTAAGGCTCTGTATTTTATCA 233782 46 100.0 30 .............................................. AGAAGTATCAGACATAGTTGATACCAAGTT 233706 46 100.0 30 .............................................. AAAAAAGTAGAGGAGATCGTTAAGGCACAA 233630 46 100.0 30 .............................................. GATGGTGATGTATTGCCTGAACTTAATACT 233554 46 100.0 29 .............................................. GTGTTTCAAAAGGTGTCAATATTTTAATT 233479 46 100.0 30 .............................................. AGTCCTTGACTGTTTAAGCACATCTAAGGT 233403 46 100.0 30 .............................................. GAAGGCAAGTTCTCTAAAAACTCATCTATA 233327 46 100.0 30 .............................................. CGTGGGCATAATACCAAACGTCTATCACTA 233251 46 100.0 30 .............................................. AAAAGCAGACCAAGGCCTACATGGTCTATA 233175 46 100.0 30 .............................................. TCTGTTGGTGATGTAGATGATAGCCCTGTT 233099 46 100.0 30 .............................................. GGAACTACACTTTTTAAAGGATGCTATTTT 233023 46 100.0 30 .............................................. CACCTTGTTGATAAGCACTTTTAGGCATAA 232947 46 100.0 30 .............................................. CAATAAGTAGTAAAGTAGAAAGATTATGCA 232871 46 100.0 30 .............................................. ATATAGAATTTTTAAACTATATGATATCAT 232795 46 100.0 30 .............................................. TTTGGTTGAAGTGTGCCATATTCGGCAAAA 232719 46 100.0 30 .............................................. CTTCATTTTTATGTTGCTCTTTCCACTGTA 232643 46 100.0 30 .............................................. TCAGCATGGGAAACACCTTCTGCATTTGTT 232567 46 100.0 30 .............................................. AGTAACCGTAGACGCGGACGTTGAGTTCAA 232491 46 100.0 30 .............................................. CGGCTATTAAAACAATGGTAGGGCTTGACG 232415 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ================================ ================== 45 46 99.7 30 GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGAGAATTCACAGG # Left flank : CAGGGATAAGGGTAAGTGATGTTTTACAATTAAAAAAGTCTGACTTTAATGACGGTAGGCTATTGTATAGGATGAATAAAAATCAAAAAGTAGTCTCTTTAAAAGTGCCCGAAAAGGCCGAGACTTTACTAAAACTTTATAATGATGGGCCTAGTCTTGCCAATAATGACTTAATTTTTTCATATTTAAGAGGAACGAACTTCAATGATTCTAAGGAGTTATTAACTAGGATAAAGACAGTAACAAGAACTCTTAATAGAAGGTTAGAATTGGTGGCTAAAAAATTGAAAATTGATAAGAAGTTAAGTATGCACATAGCGCGACATAGTTTTGGAAATATTTCTGGAGATAAAATTCCAATTCAAATGTTGCAAAAGTTATATCGCCATTCATCTATTACAACTACGATTGCCTATCAGTCTAGTTTTATGAAAAAAGATACGGATGATGCTTTAGATAGGGTAATTAACTTTTAATAAGGCGGTGAAGGTTGAAATTTA # Right flank : ATACTTGTTGTAAAAGACTGGTATCCTGTTTTTTAAAAAATCTGTTAGAATGCACTAAATCCATTAACCTTTGGATTTTCTAATTTACTTACCTTGATTTTTTAAATGCAATTGCTTTATGTGATGCTGAAATAAATTCAGCATCACGAAATTCTAAAAAAGCTCCAATTGTTGGCTTGGTGTTTCGGGATCTATCTCTTTTTGTCCATGAAAAAGTTCAATCATTCCAAATTGCCTATCTGTAATCTGCAAAATACCTATTTTCCCTTTTTTGGGCAAAGTTCTTTTTGTACGCTTTACATGCACATCGGTGTTTTCCCTACTGGCGCAAAACCGCATATAGATACTAAACTGAAACATGGCAAAGCCATCGTCCAGTAAGTTTTTACGAAACTTTGTAGCTACTTTTCTTTCGGTAGCGGTTTCAGTTGGCAAATCAAAAAACACAAGTATCCACATACTTCTGTATTGGTTTAAGCGAGAAAAACGATTTTCGTTCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGAGAATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.39%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //