Array 1 20883-19659 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_OAKJ01000019.1 Neisseria meningitidis strain Neisseria meningitidis isolate 23003, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     20882	    36	  94.4	    30	........G...A.......................	TTCTATTATAAAAGCTGCCTGACTTACTCG	
     20816	    36	 100.0	    30	....................................	GGCGGATGGCATACGGCGTGCCTTTTCGGT	
     20750	    36	 100.0	    30	....................................	GAGCATTGACACTATTTGTATGGCGTTAAG	
     20684	    36	 100.0	    30	....................................	CCGTCACTACACGAACTGGCGGACTTCTTG	
     20618	    36	 100.0	    30	....................................	AGCATTTGGGCGGCACGGGCAAAGCCGTCA	
     20552	    36	 100.0	    30	....................................	AATCAGACCGACTTTACAACGAAGGTTTGA	
     20486	    36	 100.0	    30	....................................	CGACAACAAAGCCGTCTATGACCTGACCGA	
     20420	    36	 100.0	    30	....................................	TTGGGAGGTGGAAAACCGAATCCTGCACGA	
     20354	    36	 100.0	    30	....................................	AAGCAAATCATTTTCATAGTCAGCAGCTTC	
     20288	    36	  97.2	    30	......................T.............	ACGTGAGTTTGTCTATGAGTTCGACGGCGT	
     20222	    36	 100.0	    30	....................................	TAAATTTTTGATTTTGATTTTTTCTATACA	
     20156	    36	 100.0	    30	....................................	GTGGGAGTTCGTCTATGAATTCGATGGCGT	
     20090	    36	 100.0	    30	....................................	TTTGCTGCCCGACAATGCGCGTCCGCAGAT	
     20024	    36	 100.0	    30	....................................	TGAGAAAGATTTAAGAACTAAGTTCCCATC	
     19958	    36	 100.0	    30	....................................	TTCCAAAGTTTTAATTTATATTATTTTAGT	
     19892	    36	  97.2	    30	............................A.......	CAGAAGATGATAACTGTGCTGGGGGTGCGT	
     19826	    36	 100.0	    30	....................................	ACGCAATAACGGCGAGTTTACGCATCAATG	
     19760	    36	 100.0	    30	....................................	TAACGATTGAAAGTGAGTATGTATTAAGTA	
     19694	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        19	    36	  99.4	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   GGATATTGTGCTAGAAGAAACAGAAAACGAGCAGAACAATGATTTCAGGCTGCCTGAAAATTTAGAACACTTTGATATTCAAATAGAAAATGTTTCTTTTCGCTATGCTGAAAATGAACCATACATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG
# Right flank :  ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTGTCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : NA
//