Array 1 1156309-1153500 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044434.1 Alicyclobacillus sp. TC chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1156308 36 91.7 30 A........TA......................... GCAACACTTTATATCCATTCAACCACCACT 1156242 36 100.0 30 .................................... CGAAGCCGATAAATCCAAAACATACTGATA 1156176 36 100.0 30 .................................... CTTCTCCACGTATCGAAGCGGACCATCGTG 1156110 36 100.0 30 .................................... CGATGAGACCTGCGATTGCTCCGACCCAAC 1156044 36 100.0 30 .................................... TCAATATTTCAGCGAATGACCACACTTCAC 1155978 36 97.2 30 ...............................G.... CCCACTTGAGTACGTTTGAAGTATTAAACA 1155912 36 100.0 30 .................................... TGTGATGATACAGTTTCCCGTCCCCTATGG 1155846 36 100.0 31 .................................... AAGTCGCAGCTACACCTTGGATACCTACGCA 1155779 36 100.0 30 .................................... TTATGAACACTTTCAACCTTTCAAACATGA 1155713 36 100.0 30 .................................... AAACTCTTGTGTGGTTTCTCCATCTTTCGT 1155647 36 100.0 30 .................................... GCAGGCGGCTATGAAACGTCCGCTCCAGAC 1155581 36 100.0 30 .................................... CAGCCCGATTAGCGTAAATGTAAACGGCGG 1155515 36 100.0 30 .................................... AAAGGAATATCTTCCTGTGCAAATTTTCCA 1155449 36 100.0 30 .................................... GGAATTGCAAATAAAAACCCCGCCTTTTTG 1155383 36 100.0 30 .................................... CTACACAGATTATCGGTCGAGGCGTGACAT 1155317 36 100.0 30 .................................... TCCGACAGGATTAACCGCCACGCTGAATAC 1155251 36 100.0 30 .................................... CACCTCTTTTGGTGTATAATGGTCTCAAAG 1155185 36 100.0 30 .................................... TTACACGCCCGCAACCGGCGTGGGAAGCAG 1155119 36 100.0 30 .................................... AATGAGCGCAAGCGAAGTCACTTGCGCGAC 1155053 36 100.0 30 .................................... ACGGCTAAAAGCATGCCGCGATGTTCCGCT 1154987 36 100.0 30 .................................... TAGCCGATTGAGCATTCGAAGCATTAAACA 1154921 36 100.0 30 .................................... GTCGACCAAAGTGGCGAAAATGTCGACCAA 1154855 36 100.0 30 .................................... TGAAAACTCTATCGTTTGGCAAGTTCCCGA 1154789 36 100.0 30 .................................... GCTACTAGAATGCAATAGCCCAGATGTCTT 1154723 36 100.0 30 .................................... AGGTATCCCTCCTGATGGTGTAACGACTTG 1154657 36 100.0 30 .................................... ATGCGGGAACGGATACCGCTATCGGCGTAC 1154591 36 100.0 30 .................................... GACCTGTCGGCACTTGAAGCGCAAAACTAC 1154525 36 100.0 30 .................................... AGCACCCATCGCACTAGCCGATTCTCTACT 1154459 36 100.0 30 .................................... CGAGTGGGTCTATCAACGAGGCAATACGGT 1154393 36 100.0 30 .................................... TTGCACCTGCCACGGATGCTTCCCTAAGGC 1154327 36 100.0 30 .................................... ACCACAATCGCATGTGAATGTTTCTCCGCG 1154261 36 100.0 30 .................................... CACTACATGGCCTCCATCGGCCAACCAAGG 1154195 36 100.0 30 .................................... TATGGAAAACCTGATCATAGCTCTGGTGGA 1154129 36 100.0 30 .................................... AGGTTGGACTCAAGCTTTTGTTGCCCAACA 1154063 36 100.0 30 .................................... GCTCTAACAACGCAATATCGCATCGAAAGT 1153997 36 100.0 30 .................................... GCAGGATGCTGCTCCGCATCAAGCAGAAGA 1153931 36 100.0 30 .................................... ATCGAGGAGTTTTTAGGGGCTAATTGAAAG 1153865 36 100.0 30 .................................... AACGCAAAAAAGACGGTGGTCGAAGTGGAT 1153799 36 100.0 30 .................................... AAAGGATTTCGCAAGGTTACCTAAACTATT 1153733 36 100.0 30 .................................... CGTTGCACTGCTCGGTGTTTGCCAGCGAGA 1153667 36 100.0 30 .................................... AACGCTTGCAGAATTTTTCACCGATGACAC 1153601 36 100.0 30 .................................... CGTGAGCGCCATCGCTAAAAAGGCATCATT 1153535 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 43 36 99.7 30 GTCATAGTTCCCTCGCAAGCCTCGATATGGTATGAT # Left flank : TTCGACATTCGCTCAAGTATGTGTCGTATAAGGACTACAAGCCCGTAACAGCGGCGCTAAAGCCCTTTTACAAAGCCAGTACTGAGGAAGTGCATCCCTGGAAGAACTGGATAAATTCGAGCAGACCTGGGGCATCAAATATCCACTTGTCGTGCGGTCCTGGCGCAGCAACTGGGATGAACTCGCCACTTTCTTCCGCTATCCGCCAGAGATGCGCCGGTTATCTATACGTCTAATCTGATTGAGGGCTACCAAAGGCAACTTCGTAAGGTAACCAAGGGAAAGTCATCTTCCCGACGAATGATTCTCTCACTAAGATGCTATACCTTGCCACGATGGAGGTTACGAAGCGCTGGATCATGCGGGTACAAAACTGGGGTCAGATTCTCAGTCCGTTTATGATATACTTTTTGATGGTATAGAAGGCTAAATTAACTAAAATTGTTCAAAAAAGTTTACACAAAATTATTGACAAACCCGTAGCAAACCTACTCATATCT # Right flank : GCGTTATCGTCCAATCTCCTGTGGTATAAGGGATTGGACGATTCTTTTTTTTTTTAAAAGAAATATCCACGCTGTTTTTCATCGCTTGTCATACACTTTTCAAAAAAGTAGCAACTGTTCACTTTGCATTTTCCGTTCATTTGGCACATAGTTGCCGACAAGAATTTTCATTCTCATGAACTGCTTCTCCGTGACCAATAGTGTTCGAATTGAACCTTTCTCAGGTAAATGAGCTTGAAGGCGTCGCTCGTGTTTTTCGGCCATCTCATAACTACCGCAGATACGGCAATAACAGGAATACTGCATCATATAGTACCCATCATGAAGCAAAAACTGTCGAAACTGGGTTGCTGCCTTTCGTTCAGCTTTTGTAGTCACTGGCAAATCAAAAAGTACTATAAGCCGCATAATCCTACTCATAAACCCCCATCTGTACCTCCGTCAACCTTGGCAATTGCAAAGCATTTGGGTCTTCCGTCGATATAGCATTCGAAAAGCTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCTCGCAAGCCTCGATATGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: R [matched GTCATAGTTCCCTCACAAGCCTCGATGTGGTATGAT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.50,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //