Array 1 39122-39784 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMV010000026.1 Coprococcus comes strain DFI.3.85 GNCCGMCP_26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================================================================================================================================ ================== 39122 36 91.7 188 ...G...........................T...T AAGAGGACTTGCGAAATCGCAAGTCACTCGTGGAGTATATCCTGCGGCACATCTATAGGTTGTGTCGCAGGTGATCTCCTTTTTTCAAAAAACAGGTGAATCGAGCCGAAAATGACCGGATTTCCGCGTTTTTCAGAATTCTATAACAGTAAAGCCCCTGCTTAAGGGGCTTTTTCGTGGGTGGGTAT C,AGTGA [39125,39150] 39352 36 100.0 30 .................................... TTCAACATCGCAACGGTCGTCCTCGAGCTA 39418 36 100.0 30 .................................... TCCTGAGGTCGGCCGTCTCGCGCAGTAGCT 39484 36 100.0 30 .................................... TTCGCATACCGGTACCTCGTCTGCTCGGGG 39550 36 100.0 30 .................................... GTAGTCACGCATTGCTCCATTGACCCGTCT 39616 36 100.0 30 .................................... CATCTTGCATGCCCATGGTAGGGAACTCAC 39682 36 91.7 29 ..........T................T..C..... TCTGCTATTGCGAATTAACGGACATAGGA 39747 36 77.8 0 ...C..........G......A..C....A...CTA | G,C [39767,39769] ========== ====== ====== ====== ==================================== ============================================================================================================================================================================================ ================== 8 36 95.2 53 ATTATAACAGCTGATTGAATTGCAACGCACTAGGGC # Left flank : TTTAACTTCAGCCGAGTCACCGAAGCACAGTGCGAGTGCTTTAGCCTGGTTCTCGATTTTTTTCGTGACAATCCGTTTCCAAATTTGGTTTCGCAATGGCTTTGAGATGGCGAGCTGGTGCTCGACAATCTCGGCATGTCTCGAATGTGCCCCCAAGGGGAGTGCGAGTCCGTTTGGCATATGGTCTGAGCCGCAGTATAGGACTCCGATACCGGCCTCGTTGATGCCCGATATCAGGGCGCTCGTTATCGTTACTTGGGGGTTATCGATAATAATGACCCATATATCCGACAACGCAATTTTACCGAGAACTACAGACGATCCCTTTTCCCGGATAATGAGGGAATTATCTTTGATGCAAAGATGCTTTGGGGTTCTGATTGCAACGGTTTGTAACATCTCGGCTCCATTTTCGCTAAAGTATTTATGGCGGTCGGGATTATTGCTCAAATCGATTGTTTTCCTGGTATTATTACTTATACCAAGTTCTTCTTGTTCCT # Right flank : AGTCGACGCGTGGTAGAATACAAGAAGTACCAGCGAAGCTCGTCCTTGGACGGTCAAACTTTGGGAACGCGGGCAACGCAGGGCACTAACGATAAGAGAGGCCGATTACGTTCGGCTTCTCTTATCTCCCGAGGTCATTCACCTGTAACTCAAAGAATGGCAGATCATCACTGTCGGGCGCCTTGGAGTATCATTATCCATAGTGCTTGATATGAGTAGAAATCTTATCGTAATCGAATGGAGATTGCCCGTGTTGTCATTGCCTAGAGTTACCCCCCCCCAGTAAAAAACGGTCATGTGGCTCGCATTTGGAAGCCGGTGCCGGGACCGTCGAATACGTCATCGTCCTGATTGTCGCCGTGGTGATCGGTGCGGGACTACTCGGGTTCGGCACCAGGATCGCCCAACAAATCGATAAGACCGGCAACACGATTGGCGGATGGTTCCGCAGCAGCGAGGATGTTTTCGGCGATGGCTCTTCGAATCAACCTGAAATTGTC # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAACAGCTGATTGAATTGCAACGCACTAGGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //