Array 1 1354911-1352697 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044495.1 Streptococcus mutans strain UA140 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1354910 36 100.0 30 .................................... ATGTCCGCTGTGCGCGTAAGCGTCGAATGT 1354844 36 100.0 30 .................................... TAGCTCCGCCGATTGCTTTTCCGACATTGA 1354778 36 100.0 30 .................................... GTTTGATTGCTTCAAACTCTTCTGCTGAGT 1354712 36 100.0 30 .................................... TATAGCACTAATCGACAGCGAAGCGACAAA 1354646 36 100.0 30 .................................... AGAGCAAGAAAGGATATTGAAGAATGAGTC 1354580 36 100.0 30 .................................... TGTTACCATAATATTACCTCTTTCTATAAG 1354514 36 100.0 30 .................................... TGGTTTTGTCGGTAGCGCTCTAAAAGGTGT 1354448 36 100.0 30 .................................... AGTTGATTCCGAAAGTGTCAGTCAGTATAC 1354382 36 100.0 30 .................................... AGTTGATTCCGAAAGTGTCAGTCAGTATAC 1354316 36 100.0 30 .................................... ATAAAGAAATTCCTGAGTCTGTTAAAGGCT 1354250 36 100.0 30 .................................... TGGCATGCAAAAGCTAGTTTCTAAGGCTTT 1354184 36 100.0 30 .................................... ATCTTATTAGTGGTTTTCTACTGCTCCTCC 1354118 36 100.0 30 .................................... AGACCCCTGCCCTGAAAGCTCTTGGTGATT 1354052 36 100.0 30 .................................... AGACCCCTGCCCTGAAAGCTCTTGGTGATT 1353986 36 100.0 30 .................................... GGATATTAGACAAGAGACATTCAAGATACA 1353920 36 100.0 30 .................................... ATATTTGGGGAAATGTCCCTAATGGTCCAT 1353854 36 100.0 30 .................................... GCAAAAGCGAGCTTGGCAACTGTGCAAGAT 1353788 36 100.0 30 .................................... AGTGAGTTTGAATCTTGATGGAAAAACACT 1353722 36 100.0 30 .................................... CTTGTATATTTCAATTCGATTTCCTTGGTC 1353656 36 100.0 30 .................................... TTTTGATGAAATTATTAAAGCAAAACTTTT 1353590 36 100.0 30 .................................... TTCAAGCGGCGGAAGCAAAATACGAAGGCT 1353524 36 100.0 30 .................................... CATTAAGCATGACAATATCTGATTTTAATA 1353458 36 100.0 30 .................................... CCATTCTTCTCCTTTCTATCCTAACGTTGT 1353392 36 100.0 30 .................................... CACTATTCAGGAAATTGATTAAAGTCTTTT 1353326 36 100.0 30 .................................... TCGCGGCTCAATTCTTCTTGAGTTAAAGAT 1353260 36 100.0 30 .................................... ATAAGATTTTTAGCGAGTACCCAACTTATT 1353194 36 100.0 30 .................................... TCTTTTCGACTTCTACCAATGACCTGTTTG 1353128 36 100.0 30 .................................... AAATAAAAAATTACAAGTCCCGAAAAGGAC 1353062 36 100.0 30 .................................... TAGCCTTCCCTTTGTCTGCATTGCCTGTCA 1352996 36 100.0 30 .................................... ATATTCCTGTTTTGTTTAATGTTACCTACG 1352930 36 100.0 30 .................................... TACATCCAAGCTTGTTGTAAACGGATATAA 1352864 36 100.0 30 .................................... ATTGTCTGAAATAATCGCTCACAGCAGTGA 1352798 36 100.0 30 .................................... GCTACAAAAAGGGTGAATGCTTTAAAAAGT 1352732 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 34 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGGTATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGTGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAAGCGCTAGAAAGATTGATTTCTAGCGCTTTTTTAGGTATAATATAATTAATTAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATAAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG # Right flank : AATAGAATCAAATTCTCCTAAGTCAGTTAAGTTTTAGAGCCATGTTAGTTACTGATTTACTAAAATGCATTATGCGAAAGATTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //