Array 1 162322-161804 **** Predicted by CRISPRDetect 2.4 *** >NZ_ADJH01000010.1 Escherichia albertii B156 supercont1.10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 162321 29 100.0 32 ............................. CCATAGTGGGCGGTGACGTCGTTCGAGTGAAC 162260 29 100.0 32 ............................. ACGTTGAGTATAAAAATCTGACTGATGTTCTT 162199 29 100.0 32 ............................. CAATACGGCTATGCGAGAGTGTCAACTTTTGA 162138 29 100.0 32 ............................. TGGCTGGGGCAAACACAAATTGTCGGCGCGGT 162077 29 100.0 32 ............................. GAACTCGCTAAATCCTATTATCATGACGATGC 162016 29 100.0 32 ............................. TGATGACGGCCTTCTGGTCGATGGCGAGCCAT 161955 29 100.0 32 ............................. GTGATTCTGGCTCTGCTGGCGTTTCAGTTTTG 161894 29 100.0 32 ............................. CACGGCAGGCCATTTCAAACACCTGTTGTTCT 161833 29 86.2 0 ........................TCTG. | A [161806] ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCCGCGCCGGATATGTTACCCCCTGCAATTCCTGAACCTGAAACATTAGGCGATAGCGGTCACCGGGGGCGCGGTGGATGAGTATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTTCGCGCAGGTGTATATGTCGGAGATACGTCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCACTCAACTGGCCGGTTGTGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACTTGGGGCGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAATGTTTGAATTTTGTTGGTAGATTGTTGATGTGGAATAAACTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : CTTCTATTTTCAAACTCATCAGGACGCCTTTGCCAGTTCCTTCACCAGTGGCAGTATTATCCACATAACGTCACGGCAGCGACGTTCTATTCTTCCTGGAAGCGCCTTATCAATATGTTGTTGATTATCCAGCCTTACATCATGCCAGCTATTTCCCTTCGGGAACGCTGCTGTTTTTGCGCGTTGTTGATAGCCGTCTTTATTTCCAAGACTCCAGTTTGTCGCTTCAACGGAAAGTACAGCAATACCTGCTTTGTCGAAAACTTCTGCATCATTACAACATCCCGTGCCTTTCGGATAATTTTTATTCAGACCTGGATTTGTGGCGGCGGCAATTCCATGGCTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCCGGGGTGTTTACGCCGCTATTGAAATACAGTTTATCGCCTACAATCAGGTTATCGAGATTAATAACCAGTAGAGTATTTTTCTTTTCGGCTTCACTCATTCGCTTGA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 189161-188767 **** Predicted by CRISPRDetect 2.4 *** >NZ_ADJH01000010.1 Escherichia albertii B156 supercont1.10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 189160 29 100.0 32 ............................. AACTGGCATATCTTTGCAATCACTTTCCAGAT 189099 29 100.0 32 ............................. GTGGTATCCGGCCTGTCGTTCACTCCCGCAGT 189038 29 100.0 32 ............................. CAGTTGTTTCTGGTCTGGATATGGAGATTTTA 188977 29 100.0 32 ............................. CTGCCATCGTCCAGGCCAGCTGCGCGCGGCGC 188916 29 100.0 32 ............................. GCTGGCATCAACTGGCTAAAGAATATGATGGC 188855 29 100.0 32 ............................. TACCCCGAAATTAATGGCGATGGGGCGTTTAC 188794 28 89.7 0 ........T................-..A | ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.5 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGGATGAATTGCTGGCGACGCTGACCGATGATAAACCGCGAGTCATTGCACTTCAGCCAATTAGCCAGAAGGAAGATGCTACGCGTTTATGTATCGATACCTGCATTGCGCGCAACTGGCGTTTGTCGATGCAAACGCATAAATATTTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCCACTCATTTATATTCTTTGTCGCCTCTGAAAAAACTACATTTTGCCCATTCTGGACTAATCATTATCATTCTCTACAAATTCTGTAGCGTTAATTTTTCGTTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTGGGTATAGAGTTATTTTAAATATTTACTTTTTTAATCAATGGATTAAGTGTTCTTTAACATAATGGATGTGTTGTTTGTGTGATCCTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : TTCAGGTATGTTCAGGCCGGGCAGTTTCCCACCCGGTCTTCCTCACTTACGCATTCGACCAGCTCTGGATAGAATCCGCATTTCCCAGCTCACCATGTATCACTTCATAAGATTTTTTCAGGATCATATCAGTGTGCTTGGTTAACTCCTTGAAAATGCCTTTATTCATCGCGTCGTAGCGTTTGGCATTGCTCTCAATCGGTATAAAGATATCTTTCACGCGAACCATTTTGTCGACAGCCGTTGCGTAATCCGGGTATAGCCCCAGACCTACCGCCGTATTAATCGCCGCTCCCAGGCTTGCACAGCCGTTAATGGCATTACGTCGTGCAGGAAGGTTGAATACATCGGCAAAAATCTGCATAAACAGATCGCTGTTCGAACCGCCGCCAGTAATGATTACATGCTTCGCAAAGTGATTCATTTCATTACACATATTGTCGTAATTATTCTTCAGCGTCAGCGCCACGCTTTCCAGTATCGAACGATATATCCATGCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //