Array 1 107012-106316 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKIF01000003.1 Streptococcus oralis subsp. dentisani strain UMB0008 .16933_8_27.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 107011 36 100.0 30 .................................... AACTAGAATTACTTTTAATGCAACCGTCAA 106945 36 100.0 30 .................................... TTCAAACAGTGAATGTCAACATCCAGAATA 106879 36 100.0 30 .................................... TATCACTTGCGTAACCGCCAGTAGTAAAAT 106813 36 100.0 30 .................................... TTATATGCTATCTAAACAGTTCATTAAGTC 106747 36 100.0 30 .................................... ACTCAGCAAGGGCTTGCAACGATAAGAATA 106681 36 100.0 30 .................................... TATCGTTGACTATGCTGCTTATCGCTATGA 106615 36 100.0 30 .................................... TTTACAGCTTAAATCCAAGGATTGAGGTAG 106549 36 100.0 30 .................................... ACCACTAAAAGTCATGTTGCTTTTGACTCA 106483 36 100.0 30 .................................... CTCTTGGAACTTGTATAGTTCGTAAGTCTG 106417 36 100.0 30 .................................... CGCCGAACCAAGCAAAATGATAGAACCCGA 106351 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 99.7 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAGCTCAATGACAAACCCGAAGTCAAGTCCATGATTGAAAAGTTGGTTGCTACGATTACAGAATTGCTAGCATTTGAATGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATTACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACCCTAAGTGATACACCTTTCGAAAAGATGCTAGAGATTGTCCAAGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTATTTTTATCAATGCATCCGCCTATCTATCAAAGGATGAGTTAGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAGAGTCTTATTTGTCGAACCTCGAAAAGTCTTTGATTTCCCGCAGTATGTGCTGGATCAAGACTATTTCCTGAACCCCGAAAATATGGTATAATAAGGGTAACAATTGGAACCTAACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAACTTTTCTACGAG # Right flank : AAGCTACTCATTTTTTGAGTAGCTTTTTAACTATTCCCCCCTACACATAGGTCATTCCCTTATAGCAAAGGAAAATGGCTAGTGCGATAAAAAGTACAGTTGCTCCGATTCGCTGGCTAGTACTGTACATCCTTCTCTCCCATTTGACTGGGAAGATGACTGCTAGAAAGGCACCGCCTACTGCACCGCCAATATGCCCTGCTAGGCTGATTCCTGGAATCAGAACACTTCCAATGATATTTATCACGAAAAGTGTCAGATAGGATTGCCCCAACTGCTGGATATAGGGGTTGCGAGTTGCGTAACGCAAGACGATAATCGCAGCAAATAGTCCGTAAAGAGAAGTGGACGCTCCTGCTGCTACAACTTTCGGCGTGAAAGCAAAAACAAAGAGATTGCCCATCATTCCTGATAAGAGATAGAGAAAGAAGAATTGCTTAGAACCGAAAATCTCCTCCACCTGTCGTCCAAGAAAGTAGAGTGAAATCATATTGACAATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //