Array 1 466437-471925 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031961.1 Pseudoalteromonas tunicata strain D2 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 466437 28 100.0 32 ............................ TTTTGGAGTTGATTATGAGCAAGCACAAAATC 466497 28 100.0 32 ............................ GGGCAGTGGCAAAAGTTATGAGTGCGTTGTAC 466557 28 100.0 32 ............................ TTTCCAAGATGAGCATAAATTACTAGCGCTAA 466617 28 100.0 32 ............................ AAACGGATCAAAATCAGGTTTAAATCTAAATA 466677 28 100.0 32 ............................ ATTTTAATACGCTTTTGCAATCATAATGAATA 466737 28 100.0 32 ............................ ACGGCAAAACCGTCGACGTCGTAGCCGTATAA 466797 28 100.0 32 ............................ GCCGTCCCTGTCCCAAAGAACCGCGCTTGCTT 466857 28 100.0 32 ............................ TTGCTTTTGATAAATTCGCAAGGCCTGATTCA 466917 28 100.0 32 ............................ AAAATAAAACTAAGGAATAAGACTAAAAACAG 466977 28 100.0 32 ............................ TCGAAATGGATTATAAGACCCAACAAGATTTT 467037 28 100.0 32 ............................ ACTATCTTTGGTTTGTGCAAACTCAGTTATGT 467097 28 100.0 32 ............................ TCTTCTTCTACTACCATACCCAACTCTAAATA 467157 28 100.0 32 ............................ GTACTCATACCCGTCTTGCTCGGCCGCTGCTA 467217 28 100.0 32 ............................ ACGGTCACAATCCGCTTCAATATCCCAAGCGC 467277 28 100.0 32 ............................ AAATTCAACAGTAGAATTCATGAAAAAAATAC 467337 28 100.0 32 ............................ ATTTACTTACCGCTCGATGACCGAATCTGTGA 467397 28 100.0 32 ............................ TTCAACCCACTGACCATCAACTAAAATTTTAA 467457 28 100.0 32 ............................ TCTGTCAGATATTAGCTTGACGTATTTATTGG 467517 28 100.0 32 ............................ GCACTAATAACGAAGTGGTAAGCGGTCGTTTA 467577 28 100.0 32 ............................ AGAATTAAATAATATATCACCTCCTCCATTAG 467637 28 100.0 32 ............................ AACAGGAGAGAATTTAAGCGCCTTACCTGTCA 467697 28 100.0 32 ............................ ATCAGTTTCACTAGTACCGATGGTGCTACGTA 467757 28 100.0 32 ............................ TTTTATAATCGACCAGCTGACAAGTATACTGA 467817 28 100.0 32 ............................ CGTCGTGCTAAGTAACGTTAACGTTTATATGA 467877 28 100.0 32 ............................ TTGGAAACTGGGTAAAACACGTGTTGTTTTCA 467937 28 100.0 32 ............................ TAAAAAGAGCTTTAGCTAAAAACACAAAAACC 467997 28 100.0 32 ............................ TGTAAAAGTAAATCCGAGCATATCATCAGATT 468057 28 100.0 32 ............................ CACTAACAACCGCACGCATTGCGGAATCTCCA 468117 28 100.0 32 ............................ TTCACCGCATCTTTTAGATAGTTATCAATTAG 468177 28 100.0 32 ............................ ATGAACGGCGGCGAGCATTACGCGTTCCGCGT 468237 28 100.0 32 ............................ ATGAACGGCGGCGAGCATTACGCGTTCCGCGT 468297 28 100.0 32 ............................ ATTGTGAATAACATTGTTTTGTTCATGTGATA 468357 28 100.0 32 ............................ TTTTCTTGCTCGTACTTAGCTTTTTGATGCTC 468417 28 100.0 32 ............................ TATGCGCTCGCGACCGTTAGTAACAGGTTGGT 468477 28 100.0 32 ............................ TAACCGTAAAACGTTGGGGCTTATTTATGTGA 468537 28 100.0 32 ............................ TTAAACCCCAACCATTTGGATCTGACTCTAAT 468597 28 100.0 32 ............................ AATAAGTAATAGAGTTATTGTTCGCTGTCATG 468657 28 100.0 32 ............................ TAAAAATTTATTGGGATCAGCCATAGGGCCAC 468717 28 100.0 32 ............................ AAATCAACAAAGCACAAGCAAACTACGACAAA 468777 28 100.0 32 ............................ ACTCGATGATTTTTTTAAATCTGACGCAACTT 468837 28 100.0 32 ............................ TGTGGCTGCTGAAAAGGACGCCAGCAATTGTT 468897 28 100.0 32 ............................ TGTCATAATCTTACGTTGTGTTGCTAGGTCTC 468957 28 100.0 32 ............................ TGTTTTATCAGCTAAAGCCGTACAAAGTGCGC 469017 28 100.0 32 ............................ ACTAAAAATAGTTAAAGCGCCTCTGCTGTTGT 469077 28 100.0 32 ............................ TCTCCCCGATGAAATTTACGATTTTTTCAGCA 469137 28 100.0 32 ............................ ACATAAGCACCTCTTAGATCGAAAAAGGGGCG 469197 28 100.0 32 ............................ GTCAACAATCGACACTGTTGTCGGCGCGAACA 469257 28 100.0 32 ............................ GGTATAAAGTCAAAGTCAAAAGTAAGGTTATT 469317 28 100.0 32 ............................ TTCAGTCGGGTTTAACTCGTAGAGACGGTTTT 469377 28 100.0 32 ............................ GAAAAATCAGCCTGTCTTTTATATGTATGAGC 469437 28 96.4 32 ............G............... ATGCTTAAATAAACATTGAATCCATTCAGTTC 469497 28 100.0 32 ............................ TAACGGCATTATCGGGTATAAAGTGGCCCGCT 469557 28 100.0 32 ............................ TATAAACACTTGTTCTGCCCCTTCTTCATCCT 469617 28 100.0 32 ............................ AAGAGCGTCAATCTTAACTAATTTTGACTGAT 469677 28 100.0 32 ............................ ACCAAGTGCGCCAAGATAATCAACGTAAACAG 469737 28 100.0 32 ............................ TTGAGATTTTCGAGGGTTTCATTTTCGTCTAG 469797 28 100.0 32 ............................ TAACAACTGTTGCCCTTGGTATAGGGGGTATT 469857 28 100.0 32 ............................ GCTACAATAAACACTCAATCGAACAATTACAT 469917 28 100.0 32 ............................ TCAATCAGAAAAGGCTCTGAATCTGTTGAAAT 469977 28 100.0 32 ............................ GCCTAGGCTCGGCACCGCCGAAACCAAAGAGG 470037 28 100.0 32 ............................ GATAACTGGCCTCACCAACTCAGCAGGGGCAA 470097 28 100.0 32 ............................ TGAATAACAATATTAAAACCATCAAATACTCG 470157 28 100.0 32 ............................ ATTTTTAGCCATAAAAAACAATGTTGCTGCGG 470217 28 100.0 32 ............................ GATAACCGACATTGCTAAATTCGAGCTGTTAT 470277 28 100.0 32 ............................ GTCAGGCGTAGTTGCAATGGATGTTAAAATAG 470337 28 100.0 32 ............................ TGCGCTATCGATGCGTTATACCAAAACGCCTG 470397 28 100.0 32 ............................ GTAACAGCCATTACTAACTCTGTAATCATTTC 470457 28 100.0 32 ............................ GATAAATCAGCAGGTGTACATAAACGATGGCC 470517 28 100.0 32 ............................ TTAATTGTAAGTTATAAAACGTTGTTTCGTTT 470577 28 100.0 32 ............................ TGTTCCATGCCGTCCACCTATCAATGGTGAGG 470637 28 100.0 32 ............................ TTAATTGTAAGTTATAAAACGTTGTTTCGTTT 470697 28 100.0 32 ............................ TGTTCCATGCCGTCCACCTATCAATGGTGAGG 470757 28 100.0 32 ............................ GGAATTGTTGAGCCAGGTCGATTTATCGACCA 470817 28 100.0 32 ............................ ATTTGTTAATTCGTTTTGCTTGATAAACACAA 470877 28 100.0 32 ............................ GTTAAAGGGCTAGGCTATGACGATTAAGACGA 470937 28 100.0 32 ............................ ACAATGAATACATCTAGCATAACCATCTTTTC 470997 28 100.0 32 ............................ GTAAACCGGATAACGCAGCTTTATTGACCTTT 471057 28 100.0 32 ............................ TTATTTCTCTCAGAGAGAGGTGCTGATACATT 471117 28 100.0 32 ............................ ATGATCCCAATCATAGCCGCGCCGCTAGCGAA 471177 28 100.0 32 ............................ TGTAAGTTCTGTCTGGCCGTTTAACTTCTTGA 471237 28 100.0 32 ............................ TGATTAACTCTGTTAGTTCAGATGGTAGGTGT 471297 28 100.0 32 ............................ TCAGTATTAATGCTGGTTAATGTTTCAGTACG 471357 28 100.0 32 ............................ GTTATTGAAGCCAGTTCTAAAGGCAATAATCC 471417 28 100.0 32 ............................ TTTTCGTTATTAGTGCACGGCCACGCTTAAGC 471477 28 100.0 32 ............................ TCAACAAGGCTGGTTGTGTTTGTATCTATCTG 471537 28 100.0 32 ............................ GTTCAACTTCACTTTAATTGATGTTTGACCGT 471597 28 100.0 32 ............................ TTGTTTCATAGCGATCACCGAAATTCTCTAAG 471657 28 100.0 33 ............................ TGTAGGTATCAAGTCTTGGCTCTCTAGTGTTAT 471718 28 100.0 32 ............................ TGATGCTAACATAGAGAAAGTGGCTTTAGCTG 471778 28 96.4 32 ..........A................. AGAAGGTGCTAATTATGGCGTGATGGACTGGC 471838 28 96.4 32 ..........A................. TTTTAACGCTTTACGCGCAATGCTTTTAGACT 471898 28 92.9 0 ..........A...........T..... | ========== ====== ====== ====== ============================ ================================= ================== 92 28 99.8 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : AAGTTTGCTTAATGATCTTCAAGGATTGAATTGGTTAGGCCCGCTAAATGGTTATTGCAAACTAAGCGATATTTTAACTGTTCCAGAAAATACTCAACATCGTATTGTTTCTGAAAAAAGAAGTAATTTAAGTAAGGCAAAACTAAGGCGCTTAATTGTCAGAGGTAGTATCGATAAAGAAGGTGAAAAACGTTACAAGGTAAAGATGTTAAGTCAAGGTTTTAATAATCCTTACTTAGATTTGTTTAGCAGCTCAACAGAGCAAATACACCGCAAATTCTTTGAGTTTAGTGAACTCAAATCTGAACCTGTTAATGGTACATTCGATTCTTATGGGTTAAGTAAAGTAGCTACTATACCTTGGTTTTAACCTTTTAATTTTGCTCTTTAAAAATATGACATAAAAACAGTGAGTTACAGCAGGTCAAATTTTATTAGGTTAAATTTAAATTTTTAATCTAATTACCTGTTGTAACTTACTTTTTGCCTGATATTCTATT # Right flank : ATTAATTTTATCGGAACGTGCTTTAGCCCATGCCCATAGCGAAAAGCACCAAGCCAACCACACTGCATTGCAGTTGAATGAGTACGCCAAGTTAAGCGAGTGGATAAACGACCCCGCTACGCAAGTGCTGTGGGAGTTTGAGCGCAGCGAGCTGTTGTTTGTAAAACGACTCGGTGAGGGATCAATCAAGGTTGTTGTGCGTTATCAAGGGAAAAGGGTTGATCTGGACTTATTAATCAATGCGCTGAAAGTCAAAACCAAAACCATCGAGAGCGGTATAAATGGAGGCTTGTATGAAGTATGGCGGTAGGGCGAGAATCGAACTCACATCACTGTTAAACAGCCCCTTACCAATCGGGGTACACCACCGCCTGACTAATTATTGCCCACAACCAAGGTGATTGCAATATGACCACTCAAATTGAGATCCTTACCCAAGGCAATGCCGCTGAGGTACTGGCGGCCATTGCTGATAAATTTAATGATCTGAGTGAGCCAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //