Array 1 281170-280388 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUY01000001.1 Ligilactobacillus salivarius strain FNMGHLBE8_L1 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 281169 36 88.9 40 AGA..........T...................... GGAGTGATGCAAATGGAAGCTACATACATAGCTTATGACG A [281163] 281092 36 97.2 39 .............T...................... GTAAGACAAGACCTTACTTGGTTATGAGTGCAGAAACAG 281017 36 97.2 39 .............T...................... TGTTCTACCCAGCTTTCATTATATCTCAAAAACGATGAA 280942 36 97.2 39 .............T...................... AAGGTGGGATAACATTTATTGGTTAAACTCCAAAGTTTA 280867 36 100.0 39 .................................... ATCAAGCCAGAATGAAAGAGTTTAAAGTATCTAGATTTT 280792 36 100.0 33 .................................... ATCGAAAACGAGGCTAATAAGTAATGTTTGGAA 280723 36 100.0 36 .................................... TAGAACTCAGCGAAAAAGGGTCAACCATGAAAACTA 280651 36 100.0 40 .................................... GTTCAAAGCGAATTTGATAGGCTATCAGATATCAAACGTT 280575 36 100.0 41 .................................... TTTAAAGAAAATTTGGGCTATGGCTAAAGCTGGACGTAAAA 280498 36 100.0 39 .................................... AGAAACCTAAGGAGGACAAATAATGCAAAGTGAAAATTT 280423 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 11 36 98.2 39 GTTTTCGTCTCCTATATTCGGAGATATGTTCTTACT # Left flank : TCATTTGAAGAATGACTAGGAGTTACGACTTGGTAAGCCTTAACATTGATATCTTTCAATCTATTAATAGTAAATAGCGCTGACTTCATTTGTGGCGTACCGCTAGACAAATTCAAAATTAGATCTTCATCTTCTTTAGAATATTTTGAAATTATTCCATTTAGTACTTCATACATTTTATCAAAAATAAATACTTCACTATCAGAAATGACTTCATCACTTTTTTCGATCATAGGATTATATCCATCTATAGAATTCAATGCTAACAAAATATTAGTCTCTTTTGATAAAGCACGCTCAGAATATATTAATAATATTTTTTGGGGACGAAATACCCTTACTAAATGTAATAAAGCTCCATCGTGTCTATTTCTTATAGGATCTGTATCACCAATACACGATATTAATGTTGTCATAATTACACCACTTTCTAATTAGTTATCTATATTATATATTATTTTTTCTAATTTTCGCTTTCTCTTGTCTACTTTAATTAAATT # Right flank : ATTCCTTGATCAATTAGTTGATACATCAACAACTATTGACATTTTTAATGGTACCCTAAACGGGCAATAGGTTAACTTAATAAGTATTATTTGGTCAAAATTCAGACAAGTTTTTATTTGTACTACTATTTCTTCCAATAGTGTAAGTGTATTATAACACAATAAATTGAGGTTTCCTAACAGTTTTCTTTATAGACTCACTTCCTAAAATCGTTATTTGTGAATCATTCACTTCGTTAGGAAGTAAATATAAAGTAATTACACCTGATTTAGGTAATCTATCTTTTAACACTTTAATTACTCTATCTCTAGTAGAATTTTGTCTTACTTCTCTTTCATACACACTAAATTGCTTCATTGTGAAACCTAATTCTACTAATTTCTTATGATATTTAGCTGCTTCTTTTCTATTCTCTTTCGTGTCTCTTGGTAAATCAAAACATACTAATAGCATCATACCTATCTTCCTTCCTCAATGAAAGTCGGTAATTTCAATCCTG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCGTCTCCTATATTCGGAGATATGTTCTTACT # Alternate repeat : GTTTTCGTCTCCTTTATTCGGAGATATGTTCTTACT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 45759-48092 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUY01000005.1 Ligilactobacillus salivarius strain FNMGHLBE8_L1 Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================================================== ================== 45759 36 100.0 30 .................................... ATTGAGGCAACTTATATTCTCTCTGGTGGG 45825 36 100.0 30 .................................... GCGTCGTCTAGCACTGCATTATCAACTATT 45891 36 100.0 30 .................................... ATATCACGTAAAACGTGTTGATGTTTCTTT 45957 36 100.0 30 .................................... GAAAGAACACTCAGAAGGTCTAAATTATTA 46023 36 100.0 30 .................................... GTCAACAGTGGTGTTTTGAAATACAGCCGC 46089 36 100.0 30 .................................... CTATTGACTTATTTTCTTCATCAGGTCTGT 46155 36 100.0 30 .................................... AAAAACATTCAGAGCTTTAGAGCATAGCTT 46221 36 100.0 30 .................................... AAAATGGCTTAGTTGAGCCTTTGGTGTGGA 46287 36 100.0 30 .................................... ATAGCCCCATCTAATGAGTCCTTAACAACA 46353 36 100.0 30 .................................... AAGGGATTGGTAATTCCAACTCTTACAAAA 46419 36 100.0 30 .................................... AAAAACATTCAGAGCTTTAGAGCATAGCTT 46485 36 100.0 30 .................................... AAAATGGCTTAGTTGAGCCTTTGGTGTGGA 46551 36 100.0 30 .................................... ATAGCCCCATCTAATGAGTCCTTAACAACA 46617 36 100.0 30 .................................... AAGAGATTGGTAATTCCAACTCTTACAAAA 46683 36 100.0 30 .................................... GAGATTGGGCCGGAGTTATTAGGCGTGCAC 46749 36 100.0 30 .................................... TGACAAGCCTGTTAAAACTCCAATGAAAGA 46815 36 100.0 30 .................................... TAGCATTTAAAATGAACTTTCAAACCGTCT 46881 36 100.0 30 .................................... CAACCGAAACCAGTTTTTGCCATGCGTTAC 46947 36 100.0 30 .................................... ATGTGTATCTGAACAAAGCGATACACTACA 47013 36 97.2 30 .........................G.......... TTACTGGAATTGAAGGCGGATTTGGTGAAA 47079 36 100.0 30 .................................... GAGATAATCCGCGAGAGATGGCAAAGTTGC 47145 36 100.0 30 .................................... CAGGTGGAATATTCAAGTATTTACATATCT 47211 36 100.0 30 .................................... AATGCATCTGCAATCATATTAAGAATACCT 47277 36 100.0 30 .................................... TGAAACACCTAAACCAGCTCCAGCGCCTAG 47343 36 100.0 30 .................................... GATTAACTTCTGGTAAATTATAAGGATTAT 47409 36 100.0 30 .................................... TAAAAATAGTTTCAAATAACTCTAAGACTA 47475 36 100.0 30 .................................... TTTTGTTTAATCGATATATATATAATGCAA 47541 36 100.0 30 .................................... AGCGTTGCATGTTACTTACCAACATCAATT 47607 36 100.0 30 .................................... GCCAGATGGAGGTGCAGAAGATGAAGAATA 47673 36 100.0 30 .................................... CTAGGGATTATGCTAGGGAGCAAATAACTT 47739 36 100.0 30 .................................... TTGATAAGCGAACCATTTATCGCCTTTCTT 47805 36 100.0 30 .................................... CATTTTTTGCGAAAAAAGTAACAATTATTG 47871 36 97.2 84 ..................................T. TACTTTCTTTTATGATATAATTTAGGCATAATTTCAGAAGTATATTAAAGATCTTTAGGACTTGGAAAGTCACAGGAGGATTAA 47991 36 91.7 30 ..........C.............A..........T GATCTACGTTACATTTTCTTAATGTTCATA 48057 36 77.8 0 ......T...A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ==================================================================================== ================== 35 36 99.0 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCAAATTAGCAAAAAATATATGAATGTATTGATCAAGAAGATTATTGAAGACATCACAGATGTTGAAAGACAAGCAATACTAAAATCAGTAAATGGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCTTTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTACATGTGGAACTAAACAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAAATCTTGTTAAGGCGACTAACGCATCAATGTTTATAATTGAATTCACAGAAAAGAATGATCAGAGATTCTTTGAAAACTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAATAACG # Right flank : CTAAAATACAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTACGATATATTATGGTTGATAATACAATATTATATGGTATATAATATAGTTGAAGATAAGATATAGAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTATTAGATGGTTTAGTATTAGCGTTATTAGATAAGCAAGATTATTATGGATACTCATTGACACAAGATATGCAAAGGGCAATTTCGATTTCAGAATCAACATTGTATCCGGTATTGAGAAGATTGAAGAAGGGTGGTTTATTAGAGACATATGATCAATCGTATCAAGGGAGAAATCGTAGATATTATCGCATAACAGATAATGGGGAAGTACACTTAGAAAGAATAAAAAAAATGTGGAATGACTATAAAGTTAGTTTGGATGAAATTTTTGAAAAAACTAGGGAGGGGGAATAATAATGAACTCA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [75.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //