Array 1 68533-65065 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053553.1 Diaphorobacter sp. JS3050 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 68532 36 100.0 30 .................................... GCGCGGGTCATGCCTGCCCCCGATGCGATT 68466 36 100.0 30 .................................... CGCTGATACCACCGCTCGATGGGACTCTGA 68400 36 100.0 30 .................................... TACCTTTTGAAATTCCCCCTCTCCAGCAGG 68334 36 100.0 30 .................................... CAGGGCTTCGTACTCCGCGCGGGCGATGGG 68268 36 100.0 30 .................................... AATGTCCTTGCCCAGCGCAGCGGCCAGGAA 68202 36 100.0 30 .................................... CAAGTTGGGTTATGTTGAACTGAAATTGGT 68136 36 100.0 30 .................................... GCTCCACAAACTGCGATGCGAGATTGATGG 68070 36 100.0 30 .................................... CGTCTTATCAACCTTGACGGGCACGATTCG 68004 36 100.0 30 .................................... CGCAACAGTTCCTGTGCGCGCATGGAAGCA 67938 36 100.0 30 .................................... ACGGGATGCGATATCAAGACAACTACAGTG 67872 36 100.0 30 .................................... AAGTAGTCGCGCAGGGTCATTCCAGACGCA 67806 36 100.0 30 .................................... GTAGTCCTGAATGCCGACACGCGCCCCCAT 67740 36 100.0 30 .................................... CAGCCCGGCCGCCTTGGCGTCATCCATGCT 67674 36 100.0 30 .................................... TCTGGACTAAAGGGCTTTTGCATTGGAGCG 67608 36 100.0 30 .................................... GCGCTTGCAGCGACTTCCGCAGCGCGTCGG 67542 36 100.0 30 .................................... CAATCCGTCCAGGGCGAACCAGAAGAACAT 67476 36 100.0 30 .................................... ATGGGCGCGCTCGGCCCCATGGTGGAGCAG 67410 36 100.0 30 .................................... TTCGCGCATGGCTGTGTCGAGTGCATCCAT 67344 36 100.0 30 .................................... CGCAATCATACTGGAGAGCAGCCCAGCGAA 67278 36 100.0 30 .................................... CAGCTCGACGGTGGCCTGCACCTCGGCTGA 67212 36 100.0 30 .................................... CCAAGCGCCTGTGCACCGGTATCCAAGTTG 67146 36 100.0 30 .................................... TTCTATCCCCAGGCGGCGCACCACCTCTTG 67080 36 100.0 30 .................................... TTCCAGTGCCTCGGGGCCAATACCAGACCG 67014 36 100.0 30 .................................... CGACCGTGACGAGGCTCGCCGTCAGATGAA 66948 36 100.0 30 .................................... CAGCCATAGTTCCTCAACCAACACGCCGAC 66882 36 100.0 30 .................................... ACTGGAGGCAAGACATGACTGAACCCCGCG 66816 36 100.0 30 .................................... ATTCGTGGATGAAGAGCGTCTCCACCATCA 66750 36 100.0 30 .................................... CGGCAGCTGTGAACCATGTTTCTTCGGCCA 66684 36 100.0 30 .................................... CTCGCTCAGGCCATACAGCGCGTAGTGCAC 66618 36 100.0 30 .................................... CCTCGATGACGACGGGCTTCTTGCGGAATT 66552 36 100.0 30 .................................... TCTACACGCAGCTTCACATCCGTGCCGTTG 66486 36 100.0 30 .................................... GATCTACACGACGCAACAACGACTGCGTGG 66420 36 100.0 30 .................................... GCGCTCGGTGTTCTTCACCAGATTGAGCCC 66354 36 100.0 30 .................................... GCCCTCCAGGTAAAAGTGCTCGGTCAGCTT 66288 36 100.0 30 .................................... CTCCGGGCCAGCCGAAGTGCGGCATTGATG 66222 36 100.0 30 .................................... CTGAGTGACATTTCGTTGATGGCGCAGTAC 66156 36 100.0 30 .................................... TGGGTCAGAACGGTATATCCGAGTCCATGT 66090 36 100.0 30 .................................... GTTGAGCATGTCGGCGAAGCCCTTGCGGAA 66024 36 100.0 30 .................................... ACGGCCTGAGAAACAACCAACGCATTTTGA 65958 36 100.0 30 .................................... GGGGCGAATGAAGTGGGCGCCAGGTCTGAC 65892 36 100.0 30 .................................... ATCGCCGACAAAGCCAAGGCCATGGGCGCA 65826 36 100.0 30 .................................... CAATGGCGCTGTTGAGGCGCTCGACGCTCT 65760 36 100.0 30 .................................... CGCCTGGTCAAGATCGATGGCGACGCGCTT 65694 36 100.0 30 .................................... CACGGGCTTGTGCTTTGCCTTGCGCAGCCA 65628 36 100.0 30 .................................... GTAGTCCTGAATGCCGACGCGCGCCCCCAT 65562 36 100.0 30 .................................... ATCAAGTCCGACACTGCCGACATGCTCGCA 65496 36 100.0 30 .................................... CGCCCCGAGGGCTTCATCATCTATCTGACA 65430 36 100.0 30 .................................... CGGCTGGAAGCGCTAACCGTACCGGCTCTT 65364 36 100.0 30 .................................... GGTCGGTACTCGCGCACCATCCCTTCTGTT 65298 36 100.0 30 .................................... CTTTCTCAATGCGCGCTCCTTTGCAGGTTC 65232 36 100.0 30 .................................... CGCAATTGCGCTGGTGGAATCTTCCGTGGA 65166 36 100.0 30 .................................... CACGCGCCGCGTCCAGCCGCGGCCGAAGGC 65100 36 97.2 0 ..................................C. | ========== ====== ====== ====== ==================================== ============================== ================== 53 36 99.9 30 AGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Left flank : CGCGCACGATGTGAGGCTTGAGACCGTGGGCCTGCCAATGGCGCATCACGGTGCTGGCGCTGACGCCCAACTCAGCGGCCATCGTGCGCGTGCTCCAGTGCGTGGCCGCCTCGGGCTTGGTCTGTGTGGTTAGCTTCACAAGCTTGGCCACATCCACCTTCACCGGCGGTGCGCCGCGCGGCAAGTCGCGCTCGATACCTTGCAGCCCCAATTGCAGGTAGCGTTCACGCCAGCGCGCCACCTGCACGCGCCCAATGCCAAGCTGCTCGGCAATATCCTTGTTTTGCAGCCCCTGCGCGGCCAGCAGCACGATCTGGGCGCGCTGGGCCAATCTGACGCTGGTGCGCTTGGAGCGCGCCAGCCGGCTCAGCTCGCTTTCCTCTTCATCCGTCAACACAATCGTCGGGGCAACTCGCAATTTTTCACTCCAATGCAAACCGTAGTAGAGCATTGGAGCGTGGTTGCTCAATTAAGTTTCATTAAGAATCAAACACTACACT # Right flank : CCGCACGCAACTGCGCTTGTGCTTTACCGCGAGGCTTGCTCCCGCTGGTGTACGGCCACGCAAGGCAAGGTGCACGCCATGCGGGGCTCTGACGTAAAGACTCAGCCCCCGAACAACTTGTTGGCCGTCTCGGCCACCAGACGGCCCTGGAAGCGTGCGCCGTCCAGCTCGGTCGCGCTGGGCTGGCGCTGGCCCTGGCCGCCGGCGATGGTGGTCGCACCGTAGGGGGCGCCGCCCACCACTTCGTCCAGCGTCATCTGGCCCTGGAAGCTGTAGGGCAGCCCCACGATCACCATGCCGAAGTGCAGCAGGTTGGTGATGATGGAAAACAGCGTCGTCTCCTGCCCGCCGTGCTGCGTGGCGGTGGAGGTGAACGCCGCGCCCACCTTGCCGTTGAGGGCGCCGCGCGCCCACAGGCCGCCCGCCTGGTCGAGGAAGCTGCCCATCTGCGAGGGCATGCGGCCAAAGCGCGTGGGCGCGCCGACGATGATCGCGTCGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 71877-69729 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053553.1 Diaphorobacter sp. JS3050 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 71876 36 100.0 30 .................................... CCACATCAGCGGATGCTCGGCGTCGCAGTG 71810 36 100.0 30 .................................... AGGAAGCCAGATATGGCGTCCCCGCTCTCG 71744 36 100.0 30 .................................... CTGCGATAGCAGGATGTTCCCGTCCTGTCG 71678 36 100.0 30 .................................... TTACAGCAGCGCGGCGTCATTCACTACCAC 71612 36 100.0 30 .................................... TTACAGCAGCGCGGCGTCATTCACTACCAC 71546 36 100.0 30 .................................... CGTAATGCTCAAGTCCGTAGCATGATGCGC 71480 36 100.0 30 .................................... TGGGCACCAGCACGCCGCCATGCTGATCCC 71414 36 100.0 30 .................................... GGCCTGCCCAGTAGCCCACTTCCTGCACGC 71348 36 100.0 30 .................................... GCACCGCGGATGGCTCTGGCACCGGTGGCG 71282 36 100.0 30 .................................... TCTACGACGATCCGAGTCCGGAGTCTCAGC 71216 36 100.0 30 .................................... CCAGGCGCAGGAGGCGTCTTCCTCGTCTTG 71150 36 100.0 30 .................................... CAGCCATCTCATCACTGTCACGGCACAGCA 71084 36 100.0 30 .................................... GTGCTCCAGAGACTTGCTGTCGTAGAGTCT 71018 36 100.0 30 .................................... GTGGGAGGCGATCAGGCTCCAGCGGCCCAC 70952 36 100.0 30 .................................... GATCGCGCTCGCAGAGGTCGAACCTGACGC 70886 36 100.0 30 .................................... ACCGTCAAGGATGGCCCCGACCTGGCAGAG 70820 36 100.0 30 .................................... AGGCGAAGATGCTCAGCCTGTCGACCATCA 70754 36 100.0 30 .................................... CTGTGGTCAACTGCTGCGCCATCTCGGGAT 70688 36 100.0 30 .................................... GGCGACGATGGCGGATGCTTCAAGGCGGCG 70622 36 100.0 30 .................................... TCTGAAAACTGCATCCAAATCGACCGTCAC 70556 36 100.0 30 .................................... CAGCGCGGCGCGCACCTCGTGGTCTGAAAA 70490 36 100.0 30 .................................... GCGCGAAGAATGGGCACGACGGATCGCTTC 70424 36 100.0 30 .................................... GGCCCCGCGAGAAGTCGCGCAGGGCCATTT 70358 36 100.0 30 .................................... AAACAGGAAGCGATCCGTCGTGCCCATTCT 70292 36 100.0 30 .................................... GCCCAGCAGGTTGGCTGTTTGCCCGGCGGT 70226 36 100.0 30 .................................... GCTTCGGCGTGCTGGGCCTTGATGGCGGCG 70160 36 100.0 30 .................................... AACCATCGGGGTGGTGAGGTTGGATGGTTT 70094 36 100.0 30 .................................... CAGCTCGACGGTGGCCTGCACCTCGGCTGA 70028 36 100.0 30 .................................... GTCGGCGGCGGCGCGTGCGTCCACGCTGTT 69962 36 100.0 30 .................................... ACCTATGGCAGTCAAAGCCCAATGGGTGCG 69896 36 100.0 30 .................................... AAGCGCCTTCACATCGCCCGAACCTGCAAG 69830 36 100.0 30 .................................... GTCGCGGGCGCGGATGAAGGTGTTGAAGGC 69764 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 33 36 100.0 30 AGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Left flank : GGCGCGGCTGTACGACGGCGGTAGCGAGCAAGTGCTGGAGCTCCCCGGCCTGATCGGCCTGCGCCAGCACGTCTTCGAGATGTAGCGGCGCGCACGCACCACCATGGGCCAGGACACGAGGCGATTCATGCGCATGTTGGTGTTCTTCGATCTGCCCGTGGTCACTAAGGCCGAGCGGCACGCCTACACCGTGTTCCGCCGCTTTCTGCTGAACGATGGCTACGACATGATCCAGTTCTCGATCTATGGCCGCATCCTCAACGGCAACGATGCCGTGCAAAAACACATGCAGCGCCTGCTGGCCAACCTACCACCCGAAGGCTCGGTGCGCGTTCTTACGGTGACGGAAAAGCAGTTTGCAAGCATGAAACTGCTGGTCGGCATGCCGCTGTTTCAGGAAAAAAAGGTCTCGGCCAATCAAATGGCACTGTTCTGAAACCGATTTTTGGAGAACGAAAACCCGCGCTCCGCCAAGCGGGGCGCGGGTTTCGAGGGGGCCG # Right flank : GTACGGAACGACCGTTGCAGACAACCCTCTAGTGTAGTGTTGCATTCTGTTTGGAACTTAATCGGCTATTGGCGCGGATGACCTTTTGCAGGATGTCGCGAGCGTTCTTGGTCCAGATGAACGGCTTGGGGTTGGTGTTGTGATGCGCGATGTACTCATCGATGGCCGAGACGAGTTCGGGCACGCTGGTGAACACCCCGCGGCGTAGCCGGTTCTCGGAGATGTCGCGAAAGAAGCGCTCGACCATGTTCAGCCACGATGCCGAGGTCGGCGTGAAGTGCATGTTGAATCTGGGGTGCTTGGCCAGCCACTCCTGCACAGCTGGATGCTTGTGCGTGGCGTAGTTGTCGGCGATCAGATGCAGCGTCTTGTCCTTGGGCGTCTCCCGATTGATTTGACGCAGGAACTTCAGCCACTCGATGTGGGTGTGGCGCTGCTGGCACTGGCCGATGACCTGACCGTTGAGCACGTTGAGCGCAGCGAACAAGGTGGTTGTGCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.74 Confidence: MEDIUM] # Array family : NA // Array 3 593040-589349 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP053553.1 Diaphorobacter sp. JS3050 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================================================================================== ================== 593039 28 100.0 32 ............................ TTTCGCGTCAAAGCTGTGGCTCGAATCGTCTT 592979 28 100.0 32 ............................ TACCTCATGAAGTACGCCTCCAAAGTGGAGTC 592919 28 100.0 32 ............................ TCCTGCACGCCCGCAGCACGCCCGGCATGGTG 592859 28 100.0 32 ............................ TTGCCAGGTCAGCGCATCGCGGTCGAAGTCGT 592799 28 100.0 32 ............................ TAAATCGCGCAGATGCACATGCCGCCCCACCA 592739 28 100.0 32 ............................ TCTGAATCGACACAGGAACCGTCTTAGACGCC 592679 28 100.0 32 ............................ TGGATGTGTACATCATCACGCAGGGCCCCAAC 592619 28 100.0 32 ............................ ACACCGTAAGCTGCATGCCATGAGTGCTCAAG 592559 28 100.0 32 ............................ TTGGAGCCATTGGCACGCGGAGGCCAGCTCTT 592499 28 100.0 32 ............................ CTGGTGCAGCCCATGATTGGGCGCATACTGGC 592439 28 100.0 32 ............................ AGCCGCAGTCCTCACACCCGGATGTAAGTAGA 592379 28 100.0 32 ............................ ACGCGCAAGCCGTCATAGGCCGGAGCGGTCCA 592319 28 100.0 33 ............................ CGGCGGGGGTGCGGGGAGGCAACCGCCCGGCGT 592258 28 100.0 32 ............................ GCTGGGTTGGCGAGCTGGGCGTATCCGGCATG 592198 28 100.0 32 ............................ AACGCGCCTGCCCGTTGAGCAGCCATTCATTA 592138 28 100.0 32 ............................ ACCCGGAAAACCTTTTTGGTGGTGGCGTGTGC 592078 28 100.0 32 ............................ TGCGGGGCACGTGTCTTGTTTCGTTTCATAGG 592018 28 100.0 32 ............................ GATTTGAGCCAATCGAGCGTAGTAGACATGCC 591958 28 100.0 32 ............................ GTTCGGTGCTCGCGCTTCGCGCTGCGCTCCGC 591898 28 100.0 32 ............................ ACCCGTTGAAGTCCTTTTCCCTGAGCCTGTCG 591838 28 100.0 32 ............................ AATCCATCCCAGCTGGAACAGACGTCGAATAC 591778 28 100.0 32 ............................ GCCATAGGCGTAGAAAACCAAGACTGAGAAGT 591718 28 100.0 32 ............................ TTGTAGCCCGCCTGGAACGGGTATTTAGTGCC 591658 28 100.0 32 ............................ ACTACAAGGCAGACGGTTTCCAATTTCCAGAT 591598 28 100.0 32 ............................ TGCGTGCGGGGTGTCTAGCAGCACCTCAAGCT 591538 28 100.0 32 ............................ ACAGCCGCAGCCCGATCCTGAGCCCGGTGACG 591478 28 100.0 32 ............................ AACATTAATGGCCTGCAAATTGACCATGAGTT 591418 28 100.0 32 ............................ TTTCCCGTGCGGATGCGATGGGCGGTGGCGTA 591358 28 100.0 32 ............................ GCCGTCTTTTTGCATAGAACCGAGCGTCTACA 591298 28 100.0 32 ............................ ATGAGCCAGTACGCCAGCAAGGACGACATGAT 591238 28 100.0 32 ............................ TTGCCGAGTGGCCCTAGCAGTTCAGCCAGTGC 591178 28 100.0 32 ............................ TTCGGCGCGACCTGAAAAGCGCCGTGCTGGCT 591118 28 100.0 32 ............................ TGCATGCCGATGCGGCTTACCTCATCGGTCGC 591058 28 100.0 32 ............................ TGCCACGTTGAAATCATCAAGGACACCCCATG 590998 28 100.0 32 ............................ CGGGGCACGCGGAGCGTTACCGGCATGGCTTG 590938 28 100.0 32 ............................ AAGCGGAAGCTGCGCAACGATCCAATGTTTGC 590878 28 100.0 32 ............................ ACGCGCTGGAGGCGCTGTATTCAGTGCTTGAC 590818 28 100.0 32 ............................ AAAACGCGCGCCACCAGCTTCGTGCCGCTGCT 590758 28 100.0 32 ............................ CCTGAGCGCCCCAGCCAGATTGTCCACGTCGA 590698 28 100.0 32 ............................ GCAAAGCAGTGGAAGCGCCGCGCCCTGCAAGC 590638 28 100.0 32 ............................ ATGACCACCACCCCACACGGGCAAGTGCCAGA 590578 28 100.0 32 ............................ AGCCCACACAGGAACGAGTAAGCGATAGGCCT 590518 28 100.0 32 ............................ TGCGTCATCAAATCGTTTGTCTGCGCGAAGCG 590458 28 100.0 32 ............................ ACCTCGACCACCACAGGGGGCCAACATGGCTG 590398 28 100.0 32 ............................ CTTTAAACCCGCTACGGATGAACGACGCCTCG 590338 28 100.0 32 ............................ TTGAGCTGCGCGGCGGCGACAGCGGCTTCCAC 590278 28 100.0 32 ............................ TCAAACCGGCGCGGCGCTGGGGCCTCTGTAAA 590218 28 100.0 32 ............................ TGAACTGCCGCGAGTCCGCCTGATGAGCGACG 590158 28 100.0 32 ............................ TCGATGAAGCCGCGCTGAAAGAGACTCATCCC 590098 28 100.0 32 ............................ CACGGCGTCGAGCATGTCGCCAATGGGGTCTG 590038 28 100.0 32 ............................ AATCTGAGCGGATGGTTTCGATGAAGTCTGCT 589978 28 100.0 32 ............................ TTCGTGCCCTTCGTGAGCTAATCGGGCGAATT 589918 28 100.0 152 ............................ AAGGCAGAGCCGGTGCCTACGGGCGAGTTGACCTGCAACCCGCCACCCGTACCAAGGCAATAGAGAATCCGCGCAACCGAGAGGAAGCGCGATGCGCAAGAGCAGGTATCCGTTCAGAAAGTCCGCTCGTGCTTGAGAAACAATGCGCGCAG 589738 28 100.0 32 ............................ AGGATCACCAGCGTTGCCGCTGCGATCCATGG 589678 28 100.0 33 ............................ CATGCTCGCCGGCCCTCTCATCGCTCTGTGCTT 589617 28 100.0 32 ............................ GACTCATCGCGGCGCACGCCCTGCCAGCTGAT 589557 28 100.0 32 ............................ AGGCGCAGACATAGGCCGCAAGAGCCAGATAA 589497 28 100.0 33 ............................ TTCACCGAACAAGCCGACGCCGCCGCCCTTGCC 589436 28 100.0 32 ............................ AGCACGAGACCAATAGCGGCGAGCGCGTCGGT 589376 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================================================================================================================================== ================== 60 28 100.0 34 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : AGCGCCTGATGGAGGAAGACTGGCTCAAGGGCATGCGCGACCACACGCAGGTGGGCGAGCTGCTGCCAGTGCCCGCCAACGCACAGCACCGCACCGTGCGACGCCGCCAGTTCAAGACCAACGCAGACCGCCTACGCCGCCGCCGCATGCAGCGCAAGGGCGAAACCGCCGAGCAGGCCGCAGCTGCTATCCCCGACACGGTAGAGCGCCGACCTGACTTGCCGTTTGTGCAACTGCGCAGCAGCAGCACTGGTCAGTCGTTTTGCTTGTGCGTGGAGCATGGCCCACTGCAACCGCTGCCTGTGGCCGGGGCCTTCAACGCCTATGGCTTGGGGCATGACGCGACCGTGCCTTGGTTTTGAGCCTGTTTGACCCTTTTTTCAGGGGCCATGGCAGGGCCTTGTGAATCAAGCACTTACGGAGCACCCTAGGAATTGGGGTGTTCTGGCTTTATGGGGGAATGTTCTTTAAAAACAGAACGTTGGGTGGGATAGGGTCCA # Right flank : AACGCAGGAGACGTTTGACATGAACTACACTCCACCCAGCCCGCCCGAACTGCTACTGGACAACCAACTGTGCTTCGCGCTGTATTCCGCGTCGTTGGCCATGACCAAGCTCTACAAGCCGCTGCTCGACACCCTGGGCCTGACCTATCCGCAGTACCTGGTGATGCTGGCGCTGTGGGAGCGTGACGGGCTCACCGTCTCCGAGCTGGGCGAGCGCCTGTTCCTCGACTCGGGCACGCTCACGCCGCTGCTCAAGCGCCTGGAAGCCGCAGGCCTACTGGTGCGGCTGCGCGACGTGCAGGACGAGCGCCGCGTGCGCATCACGCTCACCGGCCAGGGGCGTGCGCTGCGTGATGGCGCCCAGCCCATCCCGCACTGCGTGCTGGCCCGCACGCAGTGCACACCCACCGACATTGGCGCCCTGACCGCGCAGCTCCATGCGCTGCGCGACCGGCTCGTGCAGCCGCAGGCCTGACACCGTTTTCCCTCATGCCCCGTTG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //