Array 1 60830-57129 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046156.1 Leptolyngbya sp. BL0902 plasmid unnamed1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 60829 36 100.0 35 .................................... GTCACAAACCGGGCGGAAAATTCATCATTGAGTGA 60758 36 100.0 37 .................................... TCCCTTGCCTGGTTACGTTCGTGCGAACGTTGATCGG 60685 36 100.0 37 .................................... TTATGTAGCAATAACGCCTTAGTAACTGCTGATACGC 60612 36 100.0 37 .................................... TTCAGTAGGTACAGGCTCAAGTTGATGACAAGATTCA 60539 36 100.0 36 .................................... ATGAAAGCATAAAACCGCCTGATAGAATTCCGTTGA 60467 36 100.0 37 .................................... CATTCTGAAAAGCTATAGTTGTCAGTAGTTCTATGTA 60394 36 100.0 38 .................................... ATGATTTTTGGTACGATGAAGACATTTACTACGGTGAA 60320 36 100.0 36 .................................... TTGTTTTTCATCGTCTAATACAGGATAATCTGATAA 60248 36 100.0 40 .................................... TGCGAATCTATAGGCATTATAAGCCTGTTTATCTTGTCGT 60172 36 100.0 36 .................................... GTTATCCCAGGGGTTACAACCTCATAGGCCGTTTTA 60100 36 100.0 37 .................................... TTTCGGATTTGCTTGTCGGTGGAAAGTCCAATCAAGG 60027 36 100.0 35 .................................... TGTAGCAAGGTAGCTTCAAGGCATTCTGTAGCAGT 59956 36 100.0 37 .................................... CGTGGCCTTTTTTGCTGTTTAGTCTGCGTAGTACGGA 59883 36 100.0 41 .................................... GCGGACTACCAGGACAAGCCCGTTAGCCACACCTAGAAACA 59806 36 100.0 35 .................................... AATTGGTACATACCTAAAAACCTCAGCAGTGAATT 59735 36 100.0 36 .................................... GACATTTTTAAGAATCTCAGAAACAGATTTGGAGCT 59663 36 100.0 38 .................................... AGAGCATCACCTAGAACCTCAAAACAAAACTGATAAAT 59589 36 100.0 46 .................................... ATATTCTTTGTTTTCCTAATGCCAAGCTAGGAATTTTCAGGGCACA 59507 36 100.0 37 .................................... CATGTTCATTCCTTTTGTTTCAATAAAATCAGTATAG 59434 36 100.0 37 .................................... CACCAATTTTGTTATCTTCTGTTAGTAGCACTTTTAC 59361 36 100.0 37 .................................... ATATGATCGCCGTTAGTCGATAACTCCTGATACCTAA 59288 36 100.0 37 .................................... ACTTTGCTTCTAAGGGCTGGTTCACGCTTAATTAGCT 59215 36 100.0 38 .................................... CCTTTGAAACTGTGGATAGACCCTAGAATCACAGTAGC 59141 36 100.0 36 .................................... TATCCTTTTCAGGGTGATAAATGATATCCCAGTTAG 59069 36 100.0 36 .................................... AATTAGATTACCTTGTAAACGTCTACATCTTGAGAA 58997 36 100.0 39 .................................... TAAAATCCCGCTAACCTATCTTTTAATTCGTTTACAGCC 58922 36 100.0 36 .................................... TCCATACGTTCCGTTCGATGATCTCTGGGGATACGC 58850 36 100.0 38 .................................... TCTCGTTCATCAAAGGCATCTCGATAGATTACCTCTAA 58776 36 100.0 36 .................................... TATGTGGATACTATGGTTCGACCAGCCCCGAAGCGA 58704 36 100.0 37 .................................... TCTGGTTCCCACGATTCGGGAGGAAGGCTCGGAAATT 58631 36 100.0 36 .................................... TGGGTGTGACGTAGTGAATGCCCATCCACTAATTTA 58559 36 100.0 40 .................................... AAGGTAAGTTTCCTGTAATCTAGCCCAAATTCCCTTAGAA 58483 36 100.0 39 .................................... GGCACGCAGGCGTCAGCAGGAAGGGGCTGGGGTTTGTCG 58408 36 100.0 36 .................................... AGGAACAATGACCAAGCTAGGTCGGCCCAGTTTTTG 58336 36 100.0 37 .................................... AAGAAATGATTTCCATGGTGAGAATTACCAATTAGGA 58263 36 100.0 39 .................................... TTGTTACAAATTGTAAGACTACCTTGACAAGACCACACT 58188 36 97.2 37 ......G............................. TGCTAGGCTGAATCGCCTTCAAGCCCATAATCAGCGC 58115 36 100.0 38 .................................... CTCACGATGCTAAACAGCCGCCCCAAAATGCGCGAAAC 58041 36 100.0 39 .................................... TGATAGTGTGTGGTGGGATAGCGGTCTAGAGCATTCAAT 57966 36 100.0 39 .................................... GATGGTCGGATGGACAATGGGATAAGGGTGGACGGCTCC 57891 36 100.0 36 .................................... AGCAAACGGGTGGAAAACCAACATTCTCGTGAACGT 57819 36 100.0 40 .................................... GACAACAAAGGGCTATATAGCAATTTACTTTCTATTGTGG 57743 36 100.0 34 .................................... GCTGTTCTAAATGGTCATCCTTGACGCCTAGTCG 57673 36 100.0 40 .................................... AAAATAGTCCTGACTATCTAAGATTTTTTAGGAACGTTGA 57597 36 100.0 35 .................................... TTCCCAACCAGTTCCCCATTCGACTCGTCCATACG 57526 36 100.0 37 .................................... TCGAAAGGACTTTAACTGCATCGTATAGGCGGGATTA 57453 36 100.0 36 .................................... CCTGTTATTCCCCCCAATAGGGCCGTTCTGCTACGC 57381 36 100.0 37 .................................... GGGGTATTAATCCATCCCCCTTTACACTCGATATATA 57308 36 100.0 36 .................................... GCTTTTGGGGCGCGGGCTTAGGCTCAGCCGATTTGG 57236 36 100.0 36 .................................... TTTTTGCCCTCGTTTTTGCCCTTCAGGACAAAGGAG 57164 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================== ================== 51 36 99.9 37 CTCTCTACTCGCTAGAGAACTCATTTGAATGGAAAC # Left flank : CGCATTCGGTAAATGGCGATGTTTCTCTATCTTGTGACCTACGATATTCCATCGAATAAACGTCGTAAAAAGGTGTCAGACTTGTTGGAAGGTTATGGTAAACGAGTACAGTATAGTGTGTTTGAATGTGTGCTAGAACCTCACAAGTTCGCTGAGCTAAAACAACGGATGAAAAAACGAGTCAATCTCGATGAAGATTCGGTACGATTTTATCCTCTCTCTAAGCACACGCTGAATCAGGTAGAAACCTGGGGAGGGGTGCCCCTAACGCCAATTCCAGGATCGTTTATCGTATGATTTCCTCTGTTTTGATAATTTTTGCGACGGGGTCACAGATTACCCAAAAGCCCCATTCTCTCGTTGAGGCCGTCGATGCCATACTACATAAGGGTTTCAGTCCTTGCCAGAGGCCAAAAAACGGGCTGCTGGCTGACCCAAAACAGACCCCGTCGATCCAGGGGATTGAAATCCTTGCCCCCTATGGGTTTCAATAGGGGGGA # Right flank : GTCAGCTATCCTGCTGAAAGGGATGGCCACTGCCGTTGTGGGGACTAAGCCCATCCACAGTGCCAAAACCCTTGCCAAAAAACGCCTAACCCAACCCAAACCCGTCTAAAGGACTGCCACCATGACCCCAGAAGATGCCCTAAAAGCCCTCAAGGCCGAACACGAAGCCCTTGGGAAACAGCTTGAAGAAACCTTGCCTAGCTTGTTTAATATCTCGGTGGATGAGGTTGTAGACTTTCAGCCCGCAGGCCCAGACGGTGGTGTTGTAGGGCTGCTGAGGTCTGGGGAGCAATACTACCAATTCACCTTGGCCAATGGCAGAAAGGTGCTGCAAGAGGTTGAGGTAGAGCCCACCAATTAGCGATTTCCAGAAAATCAACCTCAGCCCTTGGCGTCTATGGCAAGGTAGGGTCATCTCTTCCAAAGACTATCTATGGCTACAGCTACCCCTGTCAAAGACGCTGCGGTGCATACCATAATCTTCAACAATGACCGCTACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAACTCATTTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 7331-13797 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046159.1 Leptolyngbya sp. BL0902 plasmid unnamed4, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 7331 37 100.0 38 ..................................... CCCTTGGACTCCAGCGGGAATTGAGCAGCGCAATGGGC 7406 37 100.0 35 ..................................... GATCTCCTGATATTTCTCCACCAGGGTGAAGGCCA 7478 37 100.0 39 ..................................... CAGTGGTTCATCACGGGCAGCACCACCACGGGCAAGGTA 7554 37 100.0 34 ..................................... GATCCAAGGTTGATCCTTGGATCAACCTTGGATC 7625 37 100.0 35 ..................................... GAGGCGAAATCGACCGCACGGGGGGCGGTGACACC 7697 37 100.0 36 ..................................... CCGCGTCACCCGTGGCATCACCACGGCGCGTTCCTC 7770 37 100.0 36 ..................................... GTCGTGTGGCCTTAGAAGATAGCTTGTATATCTGCG 7843 37 100.0 37 ..................................... TACCCACTTGCACAGTGAAGGAGCGGTGCAGCGGTCT 7917 37 100.0 37 ..................................... GCAACTTTTCCGAGGATGGCCCCGACGGTTTTTGCCG 7991 37 100.0 35 ..................................... CGAGACAATCCTAATTCGGCATCCATGCCTGAATC 8063 37 100.0 35 ..................................... TAGATGGATGATGAACGGATTGCCCCCCAGCAGCA 8135 37 100.0 36 ..................................... GGGACAGTCCGCTAGGGGACAGGGATTTTCTAGGCA 8208 37 100.0 35 ..................................... ACCTGGTGTTCTACCGTCAACGCCTGAGCCACCTG 8280 37 100.0 36 ..................................... CTGGCGGGGTGACTGTGGAGCGGGAAAGCTGATGAA 8353 37 100.0 34 ..................................... CCCGGTGGGTTCATCCGTCCAAGGATTGAGGGCC 8424 37 100.0 35 ..................................... AATGACGACGGGTTGGCATCGCTTGACCGATTGGT 8496 37 100.0 34 ..................................... ATTTTAGACCCCCATGCCGACGACAACCTAGAAA 8567 37 100.0 34 ..................................... ACCGCTGGGCAAGTGGTCGCCCTGGTGAGCCCCA 8638 37 100.0 34 ..................................... AAGACCTCAATATGCGCCACGAGAAGCCGCGCAT 8709 37 100.0 35 ..................................... CCCTGTTTGATGATGCAGGGAATCATGGAAAGCTT 8781 37 100.0 34 ..................................... GTTCCCGTATGATCGGAGCATGGTGGCACGGGTG 8852 37 100.0 35 ..................................... TTGACGGTGGTACGCTTTACCCAACGCACAAAAAA 8924 37 100.0 34 ..................................... ATAGTACCAGCTCCCTCCGTGGCCTTAAATTGTG 8995 37 100.0 36 ..................................... GCAACGCCACCGGGCTTTCCTGGCAGCGGTGAACGA 9068 37 100.0 36 ..................................... GAGACTAGCCCATCGGCTAAGAGTGGATGCTGCATA 9141 37 100.0 35 ..................................... TCTTCGGTGCAGTTCAGCAGGTGGCGGATCACCTG 9213 37 100.0 37 ..................................... CAATAGCGCGACCGCGAAGCAGACCCTCTACCACTAC 9287 37 100.0 33 ..................................... ATCGAGCTTTCTATGCCCACGCTTGAAAACGAA 9357 37 100.0 35 ..................................... GGAACTGACCTTTAGACGAACGCATATCAACGATG 9429 37 100.0 35 ..................................... CACCCCTATCCCCTGGATTCATGGACTGTGGGTTA 9501 37 100.0 33 ..................................... GCCCAATTGGCTACTAAGATTCTCTGGATTGTT 9571 37 100.0 35 ..................................... TGTGAAGGATATAATCAACGCTTATCAGAATCTAT 9643 37 100.0 34 ..................................... GATTAAGGCGGTGGAACGATTCGACCTGGCCACG 9714 37 100.0 35 ..................................... ATCCCCGCCAACTTGGTTAAAATCCTGCCTGCCCC 9786 37 100.0 34 ..................................... TAAACGCAAAAACTAACCCCCAGCGGTTGCCGGG 9857 37 100.0 35 ..................................... TCGAAAAAACCACTCCCCTGCTGGGCCGACTGAAC 9929 37 100.0 35 ..................................... ATCCAATCAATCCCCATCGCCTTGGAAGCTTCAGA 10001 37 100.0 34 ..................................... CTAGGGCGTCCTCCCCTGGGTTGGCGTCTAGGGG 10072 37 100.0 35 ..................................... TGGGGTGATGGCCTGCTATGGACTGCGGAACCATG 10144 37 100.0 36 ..................................... ATCACGCTCTGTTAAGAACGCCAGACAGCCCGGAGC 10217 37 100.0 34 ..................................... CCGGGAAGCGGCCCGTGCCGCTGCCGCCCTGGAC 10288 37 100.0 34 ..................................... TAAGCCCTACCATGCCGTGTTTGATAGGTTTGGC 10359 37 100.0 36 ..................................... AGCAGTGTTGAACAAAGCGGAATAATACTCAAGTTC 10432 37 100.0 35 ..................................... GGTTCCTATCTTCCCAGCAGCAACCCATTGAGACG 10504 37 100.0 36 ..................................... TTTCTCCGAACTTGTCATGATTAACCCACATCCCAA 10577 37 100.0 35 ..................................... CAGTTCTTGAACCTCCGGCATACGGGAGTTCGGGT 10649 37 100.0 35 ..................................... AGCAGGCAGTGCGGCATCCCTGATCATTTCTCCAA 10721 37 100.0 37 ..................................... GTAAGCGGCCTGGGTGAGTCTGTCAAACTCGGCCCAG 10795 37 100.0 34 ..................................... AGCAGGTAGGCCCAGAGCAGCTTTTGAGAACGGG 10866 37 100.0 36 ..................................... AGAGCCACGCCCAATGGATAGATCGCCCAAAAAATG 10939 37 100.0 35 ..................................... TACGAGCTGCCACCGGACGATGAGATCGAGGTGTG 11011 37 100.0 36 ..................................... CCATTGGGGGAGCTGGCAAGTGGAAGCAATACGGCT 11084 37 100.0 35 ..................................... CAGGCATACTTGATCGGCCCGTTGGCGGTGCCCTT 11156 37 100.0 35 ..................................... AAATCAGCCATGGCTATATCCTCGCTAGGGGTTGC 11228 37 100.0 36 ..................................... ATGGTCAGACCCAAGGAAAAACACGGGAAATATGGG 11301 37 100.0 35 ..................................... AATACCTTTCTTTGCCGCCGAATCGACCAGATAGC 11373 37 100.0 34 ..................................... AGCCGTTGCCAGAGGAAAAGGGGAGTAAGTGGGA 11444 37 100.0 36 ..................................... ACCTACATTGTGCGACTACCAGGAACCCCCGGAAGG 11517 37 100.0 35 ..................................... GCTGATCACGCTTCCCTCTGGAGTAGAGAATACCC 11589 37 100.0 34 ..................................... ACCATCGGCGCTGTGATTAGCTAGTCTCGATTTG 11660 37 100.0 40 ..................................... ATATTCTCGCCTATGACCAGACCGATCATGTATCCAGCGG 11737 37 100.0 35 ..................................... CCAGGCGGGGTATCGGTGGACGTGCCGTACCGGAT 11809 37 100.0 36 ..................................... CAGTAGTCGCAACTCAATGGCCTTGCGGGCGTCGTT 11882 37 100.0 36 ..................................... TGTTCATAGCGGTGCGGTGGACGGTAAGCCCCCAGC 11955 37 100.0 36 ..................................... AGAAGATTGCTAATGCCATCAAACCAGTGCTTACGA 12028 37 100.0 36 ..................................... GAGTAATCAGCTTACAGGGTGCAACGCTACACAATA 12101 37 100.0 36 ..................................... AACCTCAAGTAGGTTGCAAATGAGCTTATGTGGTGG 12174 37 100.0 35 ..................................... ATTGGCCTAGTAGCGCTGGGGACGGCTTACCGTCG 12246 37 100.0 34 ..................................... AATACTGACAGGCTATATTGAGTACATACCCGGC 12317 37 100.0 36 ..................................... AGATTGGGGCGCGGGGCATTTCAGCAGCTCCCACAG 12390 37 100.0 33 ..................................... TCACGCATCTCAAAGCTGCTGGTATCCACGGTG 12460 37 100.0 35 ..................................... AGAATCCCGTGCGTCTCAGCAACGGCTTTTGGAAC 12532 37 100.0 34 ..................................... CATCAACTGCAATATAACCTTCAGGCAACTTACC 12603 37 100.0 36 ..................................... ATCGGCGGTGATTCGCCCAGCGCCACGGTCGGTTAG 12676 37 100.0 36 ..................................... GCGGTGATGGTAGGGCGTGGGCATGGGGCAAATTCA 12749 37 100.0 34 ..................................... TTTGAACTGAGCCTTGCTGATTTTGGTATAGAGA 12820 37 100.0 34 ..................................... CCCAAATCGCTTGATTCCAACCTGATCCATACTC 12891 37 100.0 35 ..................................... GGTATCGCTAACCGTATGGTTGAAAATGAATCGAC 12963 37 100.0 36 ..................................... AAACTGCATCCCTTCCTGCACGCCCCCAACGCCCAG 13036 37 100.0 35 ..................................... AACGAGGGCAAACCCCTCGAAGGTGCGACCCCCAT 13108 37 100.0 38 ..................................... AGGAGGACACATGGGTTTAAGCTGTAGCGATTGCAGCA 13183 37 100.0 35 ..................................... TTGTGTTCCCCTGCCAAAGCCGATACCATCGGTGA 13255 37 100.0 34 ..................................... GCAAGGAGAGCATCTCATTCTTCGATTTGCAAAC 13326 37 100.0 36 ..................................... ATGGGGTGGCCTCCTGTGATTCGTCGCACAGCACCA 13399 37 100.0 35 ..................................... AGCGCAACCTTCACGACAAAGCCCCCGTTCGGGTC 13471 37 100.0 34 ..................................... TTGGGATGGAGCATGAGTGCTGAGCGACTGTGTG 13542 37 100.0 36 ..................................... TGTTACGGGCTTGCAGCCATGCCGCGATCAGCGAAA 13615 37 100.0 35 ..................................... GCTGCCATCGTAAGTAGAACGACTGCTAAGAGGGA 13687 37 100.0 37 ..................................... ATGGCACTAACATGGAATTACTGGAGAACGAACAAAG 13761 37 91.9 0 ..................................CGA | ========== ====== ====== ====== ===================================== ======================================== ================== 90 37 99.9 35 GCTCCAATCCACCCCAAACCCTCTCAGGGATTGAAAC # Left flank : CTGAAGATAAGCGGCGCACTAAAATTCATAAGATTCTTTCTTCCTATGGTCAGTGGATGCAATTCAGTGTGTTTGAATGTAACCTAACGGCGACGGAATATACTAAATTACGTAATCGTCTCAATAAACTAATTAAGCCAGATACGGATAGCATTCGATTTTACTTTCTCTGTGAGTGCTGTCAGCAGAAGGTGGAGCGTATCGGCGGGGAGGAGGTGCGCGATGAAACGGTGTTTTTTGCCTGAGGAATTGCCGCGCCTGGGGGGGTGTTGGTCTTTTGGAGGCTCTTCTATCGCCCGAAAGGCTGTCTATCAGCTAGGTTTGGCGTTTGATGATGCTTCTGAGATTCGCGCAATGGCTGCATCCCTCGTCTCATCACGGTTTCTGGATTTAGACGATGTGTTTAGAGGGCTGTTTTTGCAAGGCGAAATGCTAAAATTGGGGGGTTCGCGCTTTTGTACTTTGAAAACTAAATATGACAAGGCTTTCAGAGGCCCGCC # Right flank : AAACAGCCGATAGCTCCAAATTAGCCCCGCACTCACCGACCCTGCCGCTTGGGTGAGCCTGGGCCAGGTCTTGAGTAGGGGCAAGGGATTATTTGAATTTTGGCCTAAAATCGCAGCTTTGCCAGCTTAGAGCCAGGTATAAGCTTTTATAAGGAAGGTAGTGTGAGATGAAAATGAACTAGAGGCACGCTTTTAGGGTGCCTCTAGTTCGACTTAGGAAACGACTCGTGAGCTGAATATCCCATGACGTTGAATCGCCAACGACTCCTGCGCTACGCAGAATATGCTGCCGTTTCGGCCTCTGTTGCAGGGGCGATTGCAGCCGTGGCCACCCGCCAACTGGTCTACGGCGTTGCGCCTCTCTCGGTTGCTGCTGCTCTAAACCTGGCTAACCGCCGTCAGTGGGAGCAGCAGATTGAGCAACGTCTGACCCAGACCACCACCCAGATTAGTCAAAGCTTCGATGCTCTGGTTCAACAAAATCGGCAGTTGGATCAACG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCCAATCCACCCCAAACCCTCTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 1 857152-855047 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046155.1 Leptolyngbya sp. BL0902 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 857151 35 100.0 37 ................................... GCTATCGTGATATCGCAAGTGGGCAGCCTGCCGATCA 857079 35 100.0 37 ................................... GCGGCGCAGGCAGGTTTGGGCTGATTTGTAGGAGGGA 857007 35 100.0 38 ................................... GCGACGCCGCAGACGAACAGCGCAGGCTGCGGCCCGAA 856934 35 100.0 40 ................................... CGATTACCCTCTCTTTCACTTAGTTGTAAAACACTTGTAA 856859 35 100.0 35 ................................... ATAGGATCACTTCCGTCAGCATCAATGACACAACT 856789 35 100.0 34 ................................... GCAACAGGCACCCTCACCCTAGGCATTCCTGGCA 856720 35 100.0 41 ................................... TGGCCAATGGTGGGGTAAAGTTCCCGCCAGATGAGGATTGG 856644 35 100.0 35 ................................... ACCTACTTCGAGCCGACCTGGTTTGTGAGTGAGCC 856574 35 100.0 35 ................................... AAACAAGAAAAATCATCCGTAACAACCAAGTACCC 856504 35 100.0 36 ................................... AGGGAAGAAGTCATATTCCATACGTTTAAGGTCAAG 856433 35 100.0 35 ................................... ATCAGAAACCAAAAAACAACCAGAGAAACGAACAA 856363 35 100.0 35 ................................... TCGGACGTTTGGTACTGGACATCTCGAAGTTTAGG 856293 35 100.0 34 ................................... AAAATTGGACTCATGCCAGAGACATCATTGAGCC 856224 35 100.0 38 ................................... GTACACATAAGGGATAAGAAACAACCTAGACGTTTGTG 856151 35 100.0 36 ................................... TTAGGCAACTTTTAATTAGTGGTCATTCTGTGGGTA 856080 35 100.0 45 ................................... GGACGTCTTGGGTTGGGGTTAGCGGGGCCAGTGCTCGAACGGCAA 856000 35 100.0 36 ................................... TCCGCGTCAATCACCACATTGGCCGTTAGGTACAGT 855929 35 100.0 35 ................................... TTGTTAGACAGGCATAAAGACGAGTGGATCCGCTC 855859 35 100.0 35 ................................... AGTGAGGTAGCCCAACTGGTGCAGCAGGCGTTAGA 855789 35 100.0 37 ................................... TGTATGGATTGGCGTAGGCAGGCCCACTTGAGCGACT 855717 35 100.0 38 ................................... TTGCGGATGCTCAGGCGTAGGGCAAAGGCGAACTGGAA 855644 35 100.0 34 ................................... GTGCAAGTTGACCTACCTCGGCCCGATGGCGGGG 855575 35 100.0 36 ................................... CTTCTTCTGGCTGGCAGCGGTTTAGGGGCACATCTG 855504 35 100.0 35 ................................... ATATGCGGGCTTCTAAAGGTCAATTTCAGCAGTTG 855434 35 100.0 37 ................................... TCAGCGACTCTTTTACCCAGTCATCCGCATGGAGCTA 855362 35 100.0 35 ................................... AGCCAGGTGCCGTTGGCGCTGCCCAGGTCTTGAAT 855292 35 100.0 35 ................................... ACCACGCCGAATAAATGCCCCGAGGATGTGGCCCT 855222 35 100.0 35 ................................... GCCTCCATGTCCCGCGTTTGGTTCAGCAATTTGAT 855152 35 100.0 36 ................................... GCAACACTGCCATCATCCGCAACAACAACCAAGGAT 855081 35 97.1 0 ..................................A | ========== ====== ====== ====== =================================== ============================================= ================== 30 35 99.9 36 GTGCCGAACCTCTGATGCCGTAAGGCGTTGAGCAC # Left flank : GCGACCCTAAACGCTGGCGGAAAGCCTATAAGCTGCTGAAGGGTTATGGCGAGAGTATTCAGTTCTCTATCTTTCGCTGTCGCCTAAGTCAACGGGATCGAGAGCAATTGCGATGGAAGCTTGAAGAAGTCCTTGCTGAGGAGGATAGTTTATTGATTGCTGGCCTATGCCAGCGGTGCGTACAGCGTATCGAGGCTTGTAATCGGCCCGAAGCTTGGGATGTGGATCACAACCTACACCAGATCTTCTGATGCAAGGATCTCTGATTGTCGTAAATCCTGTTGATTGAACTCGCGCCGAAAAGCTTACCTAGCAAGGTTTACCATGCTGTTATCCCCCCTGGAGATGCTTGCAATTCGTGAAGGCTTTGTGCTGTAAGGGTTTGAACACAGCAGGAGTTGGTAAAATCAGCAGTATGGAGCAATGGCACGATGCACCGCTTTCCACCTTGCAAATCAGGCTCTCAAAAGCTTGTATAGCAAGGATTTCAAGGGGTCGCT # Right flank : GTAGAGATGGAGGCCAGCACCAAGCAGCAGTTGTCCTACAAATAACAAGCCCCCTCACTCCCCCCAGAACGGCTATAGCTCGACCGTCCCCCACAGGAGCGCCCTGCTGAGTCGGTGTCGTAGGGACATTCACAACTTCCCTGCACTGGGGCACGGCTAGGGGTGCCGCTGGGGTTGGGGAGCGGGCTGCTGTCCTTGGTGGCTGCTTGGGCGGGGGCGGGGGCTGTACCAGATCGATCTCCCCGGCGATAGTCCCACGGCATCACGGGGTTAGGCTGATTCCAAAAGTTGAGGCGCTGCTGTTGGGCTTCAGCTTCGGCCTGAAGCAGTAGGTCTTGGGTCTGGGGACAACTGCTGAGGAATTGGGTATAGACCACGGCATGACCTTCCCTCACCATCTGGAGGTTGACGAGTTGGCCCCCGGCGTAGACTTCCGCCACCATGCGCCCGTAGCGGTCGGTATCGGCTTCTCTAAACTGAATGGTAGAACCCCTAGGGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCGAACCTCTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //