Array 1 1277-62 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKXP01000224.1 Staphylococcus felis strain F8 k127_354, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1276 36 86.1 29 .........A.GC......A.....A.......... ATAAGCATGTGACTAAGAAAAGAGGAATA 1211 36 100.0 29 .................................... CATTCGGTTATATTCGCCCACAATCACCC 1146 36 94.4 30 ..............G....................T CCAAGATATACAATATGACAAACAAGATCC 1080 36 94.4 29 ..............G.......A............. TCTCGTGATGGTGAGTCCACTGTTTTGAG 1015 36 94.4 30 ............C............A.......... TTCGAAAACTTCTCTACCTTTATCTACTGC 949 36 94.4 29 ............C............A.......... TCCTTGCAAATACAACTATAGCACCAATT 884 36 100.0 30 .................................... TGTGTCAGTAAAATCTTTTGCTGCCTTCTT 818 36 100.0 30 .................................... AAAAATTCAATACAATAAAAAGTGCAGTAG 752 36 100.0 29 .................................... TTCTTTAAGCGTCCTCCTGAAGCAACTTC 687 36 100.0 30 .................................... ACGGAAATGTGAGTATAGATCAGTTTAATA 621 36 100.0 29 .................................... AAGCTTTTTAGCATTGTCGATAATCGTGT 556 36 100.0 29 .................................... GAAGCACAAAAGTTAAACGAACTAAACAA 491 36 97.2 29 ............C....................... TATGATGATAGATTTGCTCCTATGGAAGT 426 36 91.7 30 ......A.....C............A.......... AAGTTCCAGCGTCAATAAATCTAAGCAGAT 360 36 88.9 29 ...C.......G.......A.....A.......... ATAAGCATGTGACTAAGAAAAGAGGAATA 295 36 94.4 30 ............C............A.......... GTTTGCATTCGTGTGGGGGTTTTGGTTCAA 229 36 94.4 30 ............C............A.......... TCTTCATCAGCTATTACTTCTTTACTTTGT 163 36 97.2 30 ........G........................... AGTTTGTATAAAGGTATGAAAGAATTGGAT 97 36 94.4 0 ........G................A.......... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 95.9 30 GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC # Left flank : TGTATTACTTATATTGTACCCAGAAGCATTTTTGGGGCTCAAAGATATTCAAAGATTTATACAATTGATTAAAAGTTATCAACTCACAACCATTATAATTACAAATCATCCATCTATTATCATTGAGGAAGAAAATGTTTATTTATGCAAAAGCAATAAAGAGTGTCACTCAATCAAAGATATAAGGGAAGATCTAGAAATTCTTATGCCACAAGAAACAATTAATGACAAAACGGTTAGAATGATTGCTTATCATGAATTCATAGGTACAGATTTAAAAGAACTAGCACGATATTTTGAGTTTATTAATGATTACAATTAAGATATAATTGAATTTACTATGATAAATTAAAAACAACATGCTTTATTTAATGTTTAACTTCTTAACTAAAAAGCTAAAACCTCTAAATGGTAAAAACTATAGTGTGTATTTTTGAGT # Right flank : CAGAAGGCAGATACGTTGATGTAGAGTGTAGTTTTAGAACTGTGATTATTTAGAAGGAAGTA # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATTATTTAGAAGGAAGTAAAAC # Alternate repeat : GTTTTAGAACTACGATTATTTAGAAAGAAGTAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 4538-4372 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKXP01000149.1 Staphylococcus felis strain F8 k127_231, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 4537 36 97.2 29 ........................G........... TACGTTGATACGAAAGTTAACGATAATTA 4472 36 100.0 29 .................................... AATTGATGAAGTAAATCGTTTAATCGAAT 4407 36 91.7 0 .........................T......T.C. | ========== ====== ====== ====== ==================================== ============================= ================== 3 36 96.3 30 GTTTTAGAACTATGATTATTTAGAAAGAAGTAAAAC # Left flank : GACAAGAATTATATAAAA # Right flank : ATTTTTTCTGAATTTTTAGATAGAATAACAATACTAGAATGACCAATTGATAATCAATAATCGAGAAATCTTAATGATACATGTCTTTTCTTTTCATTGATATAATGAAATAATATAGTCAAATATTTTTTAGAGAAGATTGTTTTATTTTATTAAGAAAGGGGAAGTTCGATGAAGTCTATTATTGCAAAACACGCTTTTAAATTGTCAGATGGGAATTTATTTGAAAAAGTGACACGTGAAAAACCAATAGTGAATGCTCATGAAGTAGGAATAGCTGTTCATGCATCAGGTGTGAATCCGATTGATACAAAGACGCGTCAAACACCACTTCAGACTGAAGCACGTGTATTAGGATATGAAGGGGCAGGTGTTGTTGAAGCAGTAGGTGAAGATGTGACACGTTTTAAAGTAGGGGATCGTGTGATGTTTGTCGGTGCACCTAAATGGGAAGGGTCGAATCAAACTTATCAAGTATTAGATGAAGCGTATATGACGCA # Questionable array : NO Score: 3.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATTATTTAGAAAGAAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.17%AT] # Reference repeat match prediction: R [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //