Array 1 405361-404402 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ALKH01000001.1 Streptococcus sp. BS35b ctg120008231212, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    405360	    36	 100.0	    30	....................................	AATCTCGGATCTAGAGTAGATTTTGGGACT	
    405294	    36	 100.0	    30	....................................	TAGGACAACCGTTCGAAATTGTTCGAAGTG	
    405228	    36	 100.0	    30	....................................	TATCTTCCTAATTCAATGGTCATTGTAGGT	
    405162	    36	 100.0	    30	....................................	TGCTTCTAGATTACTCTTTGTAGAGCAAGG	
    405096	    36	 100.0	    30	....................................	CATCACTGTTCACAATGGGCAACAGAGATT	
    405030	    36	 100.0	    29	....................................	CAATTACTAGAAAGTCTAGAACCAGATGA 	
    404965	    36	 100.0	    30	....................................	CGATGAAATGATGCCTGCAATTCAGGTAGT	
    404899	    36	 100.0	    30	....................................	CACCAATACGAAACCCTAGATTAACACCAG	
    404833	    36	 100.0	    30	....................................	TTACTGATGTTTCCGCTCTTTGTAATGCCA	
    404767	    36	 100.0	    30	....................................	ATAAATACGGGGACAGCTTTATCAAAAGTG	
    404701	    36	 100.0	    30	....................................	CTTCACTTATGGTTTTGCCTAGTGAAAAGA	
    404635	    36	 100.0	    30	....................................	TAATGAACGAATAAAGTCAAGCATTTTTCT	
    404569	    36	 100.0	    30	....................................	GAAATGGACTGAAGAACTCCAGGACAATGA	
    404503	    36	 100.0	    30	....................................	CGTTCCAAGTCATCCCACTTCCAGGGTTCG	
    404437	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	 100.0	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                              	       

# Left flank :   GATGATTTTCTATCCTATAGTGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTTACTAATCATAATAATTCATTATATATTGTTTTGTTTCCTTCCAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTTTTATTCTCTAGAATTTATGTATGATCGCTTTGTCAATCAATATCCAATAAATCAAATACCTGATGAACAAGACTTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGTTCGGACATTCTTCACATGAGTTTATCTGTAGAAGATCAAGTAGCATTAAAAATTTTGAATAATTTGTATCAGTATGAAATGAAAACAAAATTTCGTAGTGAATCAGTCAATCCAATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGGAATTTAAGAATTTATAATATTTTTGAGGGGAGCAAAAATCAAAATTGACGAATTTGAG
# Right flank :  ACCTCATGCTTGAAGATGGCCGATTGGCTGAAAAAGAAAGTTTCAACATCGAGCCTGACGGATTGATCACTACAAAATAATTTTTTAAAAATAGAAAGGAAATTTTCTAAAATATTGTTCGAATTGTAACCGCAGGCTCAGGCTTGCGGGCTTTTTTGTTTGCAATAATAAAAGCAGTGACGGAAATCACTGCTTATCAGCTGTAGCAAATTCATAAAGTTTTTCTGCTGTGAGAAGTGCCATTTTGTCCATGCTTGTTTTTCCTTTTCTGAGGTCAGAAACGGTAGTCCATGGCACACCGGCACCTTGTGAAATAGCAGATGTAGAAATAGAACTATTAAGTAATTCTTGAATAACTTTTCTCATATTTTTCTTTACCTCAATTTTTATCTTAATCATATTATATAACGGAGAACCGAGATGTCAAGCGTTTTGATAAATTATTTCTAAATATTTTCGCCCAAAACTTGCCCCCAAAAACTTATTTTTTTATATTTTTT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.77   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//