Array 1 642981-644028 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAVT010000001.1 Vibrio metschnikovii strain C18x.3 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 642981 28 100.0 32 ............................ AATGGTTCTTTGCGAATCTTTCCACTTACTAC 643041 28 100.0 32 ............................ GTAGTGAAATTGTAACAATACTTCGTCAGCAG 643101 28 100.0 32 ............................ AGTGGTTAGCTCTTCGTCTGACACGATAAAAA 643161 28 100.0 32 ............................ TTTATTTAATTTTTTCTCTCTGGCGTATCTCT 643221 28 100.0 32 ............................ AGAAAGCGAGGGTGGGTACTATTATTCAGCAA 643281 28 100.0 32 ............................ CTCTGGAAGATATATATGCAAAAACAACCATA 643341 28 100.0 32 ............................ TTCAAGCTTCGCTTTCTCTAGTTCGTGCTGAT 643401 28 100.0 32 ............................ GTTTGTAAAGTGATGTTCGTCACATTCTGGAA 643461 28 100.0 32 ............................ TGACACTCATCAATAACAACAAGTGCACCAAT 643521 28 100.0 32 ............................ ATGAAAGCCCGAAGGACAGCTAAGCGGCTCCG 643581 28 100.0 32 ............................ GATGGATTCATTAATTGCGCTGGATATTGAAT 643641 28 100.0 32 ............................ TATCACTCGATGGGGCTTTTTTATGACATCCG 643701 28 100.0 32 ............................ TTCACGAACATCTAAAACTTCATTCTCTTTGA 643761 28 100.0 32 ............................ ATAATTACGCGAACAGCAATAACAGCAGCGAT 643821 28 100.0 32 ............................ GTGTTGATATTGCTTATGACGATTTGCATGGT 643881 28 100.0 32 ............................ AACAGCACTCAAACTTTTACCGCTGCCGAGCT 643941 28 100.0 32 ............................ TTTAATCATTCGAGTAACTAGCGCGCGGATTT 644001 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGCTTTTTGCATGATTTACAAGGTTTAAACTGGCTTGGTCCGTTATCTGGTTACTGCCAAGTGAGTGAGATATTGGCTATTCCTGAACAGGTGCAATATCGAGTGATCTCAGTAAAGCGTAGCAATTTAAGTCAAGCGAAGCTCAGACGTTTGATCGCTCGCGGTAGCATCGATAAAGAAGGTGAAAAACGTTACAAAGTGAAAATGCTTAGCCAAGGTTTTGATAATCCGTACCTAGATTTATTCAGCAGTTCGACGAAGCAGGTACATCGTAAATTTTTTGAGTTTGGTGAAATACAGCCACTGCCAGTATCCGGAAAGTTTGATTCCTATGGGCTAAGTCATACCACTACGGTTCCTTGGTTTTAACCCTATTTTTTTGCTCTTTAAAAATAATCTTTAAATACAAATAGTTACATCGGGTGATTTAAAATAGGGTAAAAATACATTTTTTGCTCTAACTGCTTGTTGTAACTTATTTTTATGTTGTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTTCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGAAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1939-2206 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAVT010000038.1 Vibrio metschnikovii strain C18x.3 Scaffold38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1939 28 100.0 32 ............................ TGATACTGTGAATTTCGCTTGCGAAACTGTGT 1999 28 100.0 32 ............................ GCTATACAGTCAAATACACACTGAGAAACATC 2059 28 100.0 32 ............................ TTGGTTCGCTTCCGGTGCGTTGCTTGCTGGCG 2119 28 100.0 32 ............................ GTTCAGCCAGAACTCATAGCTTGATATGTCAA 2179 28 92.9 0 ........................A.G. | ========== ====== ====== ====== ============================ ================================ ================== 5 28 98.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TACTTATCTGGATATGGGATCAGAAACTTATCTGTTTGAAAAAAAAGAACTCTTGAGTTCGGGACTAGAAGTAGACGGCGATACGATACAAGCTTCTACTCCAGAAGAAGCAATTGATAAATTCAAATTAAATTTCTGTGAGCCTTTAGAAGATTATGCAAATTCCAGTGCTTCAGGTGGATTAGCGACATTCATTTTTGAATCCTTCAAATCAGTTACTGGGAAAAAATAGCTAACAAACGCTTCAAGAGGGACAGCCAACGCGTGGCATTTTCATTATGCGTTGGTTTTCGTGATTGCAGTATTATGCGGAAGCTTGGTAGTAGCGTTGGCTGCCCCTTAAGCGGGCGTTAACTGGCAATGAAATTACCCATATTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAAAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGATAAAGTTTCATA # Right flank : TATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGTGGCATTTTCGTTATGCGTTGATTTTATTAGTTTTTAGTGTGATGCGGTGAGTTTTTCGTTGCGTTGCTCACCCCTTAACGCGGCGTTAGGCATTTCAACTTCATAGTCTGGATGTGTATATGATTGATTTTTTTGAGAATGGACTGTGCACTTATTGCAACTTAGCGATTCGGGATTTGTCTAGGATTGAGAATTACTTTGATTCA # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1993-1785 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAVT010000039.1 Vibrio metschnikovii strain C18x.3 Scaffold39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1992 28 100.0 32 ............................ ATCGCCAGAGGCCGACACTGACACCAAATCGT 1932 28 100.0 32 ............................ TATGGCCGCGACGTTAACGGCGTGATTGAAAT 1872 28 100.0 32 ............................ ACTATCTGTAACTGTTACAATGTTAGCCATAG 1812 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : CGCTATAACAAACGCCTCAAAGGGACTGCCAACGCGTGGCGTTTCCAGTCCCATTGAGCCGCGGTGGTTATGGTTGTTGTGTTTGAGTTTAGTGATAATGCGTTGCCAGCCCCTTAGGCGGGCGTTAACTGGCAATGAAATTCCCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAGATCGAGTGAGAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCAT # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCATTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAGGCGTCATTTGAGATCGAGGTAACATGTTATTCATTGAGAAATATAATAAAAGTCGTGATGCTGAAGTTGAAAAATTACGAGTAAAAGCCGAACAAGTACAGTTCACAGTCGATAGGCTTGGTGAATTCATCTTATCTTTAAAAGAAGATGAACATCCTCATTTGATCATAGAAAATGAGCAGGTAGTTGGCTTTTTCGTCTTAGATTTGTCTTATTCTGATACTTACAGCTTTAGCGATCCAAAAGCGCTAGGTATTCGAGCTTTGCTGATTGATCAGAATCATCAAGGTTTAGGTATTGCGAGTAAAGCAATGAATTTGTTACCAAGCTATGTTATTTCAAACTA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //