Array 1 152367-153458 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CPXT01000002.1 Streptococcus agalactiae strain B68VD, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    152367	    36	 100.0	    30	....................................	AAACGTCATAAAACTAGAGGTTTAACAATT	
    152433	    36	 100.0	    30	....................................	CTTGCCGATTAATTGGGTTTTTGTCGCTCT	
    152499	    36	 100.0	    30	....................................	AGATATGACAACGGATAGTGTTGATGGGCG	
    152565	    36	 100.0	    30	....................................	TTATCGGTGCTCTCGATTTGATGGCTTTGA	
    152631	    36	 100.0	    30	....................................	AATACATGAATCAGCTCTATCCAGTTAGAT	
    152697	    36	 100.0	    30	....................................	TGGTCTAACGGCGTCAGGTCTATGAATTAT	
    152763	    36	 100.0	    30	....................................	AAGGTACTTTTAGCTTGTTCTTGTGGTGTT	
    152829	    36	 100.0	    30	....................................	ACAGCTACTGTAAATTCTGCTTTTACGGTT	
    152895	    36	 100.0	    30	....................................	TAGTGCAGTTGTCAAGGAGATTGTGAGCGA	
    152961	    36	 100.0	    30	....................................	TTTAACCTTTGAAAATGTGAAAGGCTCGTA	
    153027	    36	 100.0	    30	....................................	GCGATGATGGTAAGTCATCATGGACAGCGT	
    153093	    36	 100.0	    30	....................................	TTTTACACACGATGTCAGATATAATGTCAA	
    153159	    36	 100.0	    30	....................................	AGTACTGCACTAGGAATTGTAGAGATCAAA	
    153225	    36	 100.0	    30	....................................	CGTACCATCTATCAATTTACCGCAAGCTGT	
    153291	    36	 100.0	    30	....................................	CCGATTATTTCCTACATAATACGCACGTTT	
    153357	    36	 100.0	    30	....................................	TGGTTATACATTTACTAATCCATCAGCATT	
    153423	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        17	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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