Array 1 98034-97809 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084016.1 Anaerostipes caccae strain NBRC 114412 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 98033 30 100.0 36 .............................. AAAGCGCTCTCCTCTGGGACCCGTTTCCCGTCTTTT 97967 30 100.0 35 .............................. CGATGGCCAAGACGTTCCATAACCGTTCGTGGCCA 97902 30 100.0 34 .............................. GCTATACGCTTTCTCAAAACGCAGGTGAGCGTAC 97838 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 35 GATAAACAGTAACAAGAGTTGTATTGAAAT # Left flank : AAAACTATCGTTGGACGGTTCCATTTGTTTGGTGGATACTTATCCAGTAGATATTACGTCCATTTTGACCAGTTTGGAGGCCTTGCATTCGAAGAGATGTTAGTTTTTCTTCTTTCAGAAAAGGCTCGGAGGTGGTGTGCAAAGCACAGTGAGGCCGCCCCCGCGCCAGCGAGTTCCGAACGGGCCACCGCAGAGACTTTACTGAAAGTTAGAAAATCTTACATCTCTGAGACAGCAAGCCGGAAAACTGGTCAAAATGTCATACCAAAGGGCACACCGTATTTTATACTCTTCGGGTGGCGCGCTCTGCGCGATAAGGTATACTGATTTCCCAACCTATAAAATTGATAATTGCATACAAACCGCGGGAAATAGCCATTTGAAGGTGTATTGGAGAAAAATGTGAGAAAATTGATGACGGTTGGGAAATATTTAGAGAAACGTTGATTTTATCAGGAAAACTGGCTATAATGAAATGGAAGAATGGCTTAAAAGCGTTG # Right flank : TTGATTGCAAGATCAAACCGTTTCATTACAGCCAGATAAACAGTAACAGAAATAAGATATACCTTGATAGTTAGGCACAGAAAAGTAGTCAATGTTTAACTGCCAGGGTATTTTTCTGTATGTCATGACATTTTTACCAGTTCTGCGGCTTGCTGTCTCAGGAAGGTAAGATTTTCCAACTTTCAGCAAAGTCTCTCCAGCGGCCCGTTCGAAGGAACTTAATGAGCAGGAGCCGCAGGCGAAGTGCAAATTTGGTGAATCGAACCTCCCCTCCTTGCCTCTGAACCTTTTCTGAAAGAAGTAAACGAACCTTTCTTCAAATGCAATGCCTCCGAACTGGTAAAAATGGACATAATGTCTGATGGATAAGTATTCTCTGAACAAAAAAAGCTATCCAACGATCGTTTGATAAGTATTTATCCAGTAGATATTACGTCCATTTTCTACACGATTTCCGTTCGGCTCTTAGAATGTCTCACTCCAATCATGTGGAAAATGTA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAGTAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 2 516491-515417 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084016.1 Anaerostipes caccae strain NBRC 114412 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 516490 30 96.7 35 A............................. TCCGCATCCTCCACCACTCTATATGTCCCAGCACT 516425 30 100.0 35 .............................. CTCACCGACCGATCGGGAACGAAAAATTTAAAATT 516360 30 100.0 37 .............................. TGATAGCTGCGGACCTGTTAGTTATCCCAGTAAAAGC 516293 30 100.0 35 .............................. TTTCCACGGATAAAGGTTGCTTCGATATTCGATAG 516228 30 100.0 36 .............................. AAGGTAAATGCATAGGACTCTTCACCTAATTTTCCA 516162 30 100.0 35 .............................. ATCCTTTTTGCCAGATCTTCCAGCTGGCTTACATC 516097 30 100.0 35 .............................. TTGTGAAGCCGAATAGAACAGGCACACTGTGCTAC 516032 30 100.0 35 .............................. TCTCAATTCTTCCTTCCCTCGGATCTGTCCATCTG 515967 30 100.0 35 .............................. ACAATCTTTGTCTTTTTATACTGTTCTGTTTTTCC 515902 30 100.0 35 .............................. TTTCGTACTCACGTTTCCCATCGTTCACGCACTTT 515837 30 100.0 34 .............................. GCAAAAAAAATAGGGTGCAAGATTGACGGGAAAA 515773 30 100.0 36 .............................. TGCTTGTATAGATACCCCTTACGGGTTCCGTGCATG 515707 30 96.7 35 ...T.......................... TAGCCTCTGCGCCCTGAGACGCTCTTTTGGAACTG 515642 30 96.7 36 ...T.......................... ATTCCTTCCCATCCTTTGTATATTTCAGGGAGAAAT 515576 30 96.7 35 ...T.......................... TCGAGCCAGGGAACGCATTTGGCAGCACAACGAAA 515511 30 96.7 35 ...T.......................... TCTGCAGTTGCATAAGGATCATCTTTTGCCACATA 515446 30 83.3 0 ......C............CA..C....G. | ========== ====== ====== ====== ============================== ===================================== ================== 17 30 98.0 35 GATAAATAAAAACATTAGATGTATTGAAAT # Left flank : TGTTTATAAGACCACGGCGAACTTAAAGAAAGACAACTGTAAAAGCTGCGGATGCCTGCGGAAAGAGATTATGTCCAGGAGTGGGGAAGAAAGAAAAAAAGATCGGAATACAAACAAGGGCGTTCCGAATATAGGATTGTCTACACGGGAAGGAGCAAACAGAAACAGCAGATCCGAGATCAGGGGCGTATCTTGGGTATCGGAGAAGCAAATTTGGAAAGCACAGATTATGCACAAAAGGAAGAGTTGGCATTTGTGCTATTCTAAAGACTTAGAATATGCCACAAAAATAAGAAGGGAAGCAGAAGAACACGTAAAGGACGGAACATTCCCGGAATGGATAGAGAAATTTAAAAAAGGTATATAGGCCCGGCAGGTAGTCGGGCTGTGCATAAAAATAGGGGTAGATAATAGCCGTAAGGCCCTGTCAGAAACGGGTAGTTTGTCGGAAATTTGTCGGGAATGCCCCACAGACCGCATAAAACCGTACTTTCAAGTTT # Right flank : TCTTTTCTATTACATAAATTTTCTACAATTTTATCTTTAAAATATAGGTGAAGAATTTTTTTGGAATTTGTTGAGAAAACAGGATGATTGTAGTAAAATAGTAGATAGAATGGTTAAGGATTTGGGGATTCAGATATAAATATGATGAATAAGAATGTCGTACAGAGATATGGGGACCAATCCGCTTCAAAATGGGATAAGAAAAACAATAGTAAATTCATTAGAATAGCTGACGATAGCTGTTCTTACAAGTGTGCTTTGCATAGATATAATTAGACGGAAGTTGTAAATATACAATTTCTGTCTTTTTTTGTGAATAAGGGGGTTGAGGGGAAGTTCAACAAAATGGGGTATAGTATTTATAACTTGATTTTTAGTAATGTAGAAATGAATTTGCATGAAAAATGTAAATATTAAACAAAAAGGAGAAACAGCTATTACAACAACGCTGAGTATTGATTATGAGATTTCTAGTATTTTATCGAAATGAAACACCTTTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAATAAAAACATTAGATGTATTGAAAT # Alternate repeat : GATTAATAAAAACATTAGATGTATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 3 2343778-2344071 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084016.1 Anaerostipes caccae strain NBRC 114412 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2343778 30 96.7 37 ................C............. TTTTACCATGCACCTGCCTGAAATGCAAGGAGCCGAG 2343845 30 100.0 36 .............................. GCCGATAGCATGGATGGAGATGCCGGAGCCGTATAG 2343911 30 96.7 35 ................C............. ATCTGATACTGTGTTACATTACTAACTTTGTTCCA 2343976 30 100.0 36 .............................. TGGGTAGTGTGCTGGTCTATGGCAGCAAAGTTCTCA 2344042 30 80.0 0 ........GT.....A..........T.TA | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 94.7 36 GATAAACATCAACAAGAGTTGTATTGAAAT # Left flank : CTGCTGGTGAGGCCGTACAGGGAAAGCAAGAAGTTAAAGGTTGATTTGAAAGAGGTAACAGGAACAAGATAATATTGGAAATAGAGAGGTCTGCACCTGGTGTGCAGACCTGCATGATAAAGGAGGTTTCTATGGGAACAATAGCAGTAGGTTTGGCTGTCCTTGGTATTGTCAGTTTGATCGTCAGAAGCATGGTAAAGGATAAGAGACAGGGAAAGTCGATCCAGTGCGGGAATGACTGCAAACATTGCGGCGGGCACTGCGGTCATTGAGAAATGGAGAGTTGTCTCAGCTGACTACATTGAGGCTGGCTGATAATGATTGGATTTCCCAACCACAAATATTTAAATAGAATGGCAGAACCGCAGAAAATGGTGGTTTACAGGCGATTTGAAAGAAAAAACAGAAAATATGAAGGTGGTTGGGAAAAAACAAAGGAAACGTTGATTTTATCAGGGAAACTGGCTATAATAAAAAATAGAAATGGCTTAAAAACGAGG # Right flank : AAAGATCTTCTTTCTATGTCCAGGAGACAGAAATTATAATTTCTGCCTTCTATTTTTTTGCCTTCTGTCTGCTGAACCACACCAGTCCACAAGCTGCCGTTTTTATGTTATGATAAAAGAGCAAAACACAAAGGAGGAGCTATGAGATTTGGTTACGATATCCCGGATTCTTTTTGGAGCCTGTTCCGTTCTGTAAACCGGGATCATTACATAGAAGCGCTGCTGAAAATCAGTGAAGAATATGAATATAACAACTACTTTCTGAGCCGGGAGGTCTGTATTCAGGTCCTGAGCGACTGGAATGCGGACAAGCGCATCTGGCTCCAGCGGGAAGAGTTTGAATCAGAACTGGATGTACTGGAGACTCCCCCAAACCGGATACTAAACTGGCTGATTAAGACCGGCTGGCTGAAAAAACTGGATGACTTTTCTACGCTGACATCCAACATTGTCATTCCCGATTACGCGGCCGTTTTTCTCGATGCTTTTGAACAGCTCGT # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:0, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACATCAACAAGAGTTGTATTGAAAT # Alternate repeat : GATAAACATCAACAAGCGTTGTATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //