Array 1 39667-39516 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAYX01000012.1 Streptomyces sp. KE1 Contig12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 39666 29 100.0 32 ............................. ACCGAACGGTCCTACGCCGACACCCTCCCCGA 39605 29 100.0 32 ............................. CTCCGCGAGCAGCACGACAACGTGGACGAGCT 39544 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : CCACAGAACCCCTCCCCGTAGACCGGTTTGCCGCTGCGGATCACCTTAGGGGACGGGGGGTTGGGCGTCTTGGGGTTGAGGGGCGTGGGGGTGGCGTGGGGGTCCCTTACGGGGTGGGGCTTCGGGGGTTGTGGGCAAGGTGCGTTCGGGTGCGTTCGGGTGCGTTCGGGTGCGTTCGGGTGCGTTCGGGTGGGACGCCGAGTGGTTCGGGGGAGGAGGGGTGTGGCGGGGCTGGAGTTGACGCGGGGTGTAGCCCCGTTCCGATTCGCAGGAGCCACTGGGCGAGCCGGGCTGGCAGTTGGGGGCTTGGTTTCGCTTGGGTGCAACGTTGCTGGGGGCTGGGCTTGAGAAGGCGGAGTCAGGTCGGGGGGACTGGGGGAGGATGGGCGGGGCTGATGAATCGGGAGGGGGTTGGTATGCGGCTTTTGCGTGAAAGATCGCAACCGGCGAAGCTTGCAGGAATGGGTGGTGGCGCCGGGTAAAGGTGCGGGTCATGGAGA # Right flank : GCGCGGCTCATCGGGGCCCTGACCCAGCTGATGTGCTCCCCGCGCTCGCAGGGCCCCCACCCCCCAAGTCACACTCCAAACAAGCCACGCCGGCCTCACCCAACTCCCCCCACCCGTGGGCCGGCCGGCACACGCCCCAGCCCCCTCACGGCTCACAAACCCCGCCTTCCACAGCCGCCCCCTCCGCCCCCTCCGCCCCCTCCGCCCCCTCAAAAAACCCCACAACCCGCCCCGCACACCCCCCACCAGCCATCCCCCCATGCTCCCCATCCCCCACCACCAGCAACGACCCCCCAGTCCGCGCCCGCATCGCCCGAGCCCAAGGCAGCGGCGTGATCACCTCATCCCTGTGAGCCACCAGCAGCAAAGGCCCGCCCGCCCGGCCCGGTTCCACAGGCGGCCTCTCCGGAGCGGGCAACCCCGCGCACGTGCTGGTCCCCGGGACCTCGCCGCTCCCCGGGAACATCGGCCGGGTCGCGCCCAGTGCCGGGTAGGCGGCG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 163777-164048 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAYX01000006.1 Streptomyces sp. KE1 Contig6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 163777 28 100.0 33 ............................ GGGCCATTCCGTATCGCTGCGCGGTGACGGAGT 163838 28 96.4 33 ..........................T. GAGCACGAGGCGGGGCACCTTTACGCGCTCAGG 163899 28 100.0 33 ............................ GTGGCTGGCCAGGCGCTCGGCGCCCTCGATGGT 163960 28 100.0 33 ............................ GGCCTGGATCACGCCGGCCATCCCCTTGAAGAT 164021 28 96.4 0 ......T..................... | ========== ====== ====== ====== ============================ ================================= ================== 5 28 98.6 33 GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Left flank : TCACCACCTACGACACCGACGCCGACATCACCCGAGCCGTCGAAGCCGGCGCCACCGGCTACCTCCTGAAAGCCGAACGCCCCGAAGAACTCTTCACGGCCATCAGGGCTGCGGCTTCGGGTCGTACGGCGTTGTCGCCGCCTGTGGCGCAGAGGGTGATGACTCACTTGCGGAATCCGCAGCCCGAGCTGACGCCGAGGGAGCGGGACATTTTGCGGCACCTGACGCAGGGGCTGGGGAACCGGGAGATCGCCAGGGCGTTGTTCATCAGCGAGGCTACGGTGAAGACTCATTTGGGGCGGATTTATCAGAAGTTGGGGGTGGAGACACGGGCGGGGGCGGTGGCTGTGGGGAAGGAGCGGCGGTTGTTGGGGTGAGGGGGGGTGGCGGGGGTGGGTTCGTGGATTGGGGGGTGCGGGGTGCGTAGGTTGGGGGAGAGGGAGGGGGCGGTGATGAGTAAAGGGATGGCAAAGGCAGCCTGAAGGTGCAGGTGGGGAAGG # Right flank : CGAGCCGCCAGACCATCTACGACGACCTCAAGTCGTGGTCCTAACGTCACTCGTTCGGCAACGGGGCTCTTGCGCCTGCGGGCATCACCTGCCTGCCGCACCGGCCTTGCATCGGTTCCTGGGGCCACCCGGTCCTTGCGGAGACCACCGGGCAGGCGCCGCCCGCTTTGCCAGGCTGACCGGAACACCCCCGCCCTCGCGGTGGCCGCTGATGTCCAGCCGCGCAAACCCGGCGGCAAAGTGGGAGCGCGAGTACTAGCGACCGCCCCCGACGCCCCTCTCCACCTCCCCCAAAGCCTCCCCCCACCCAAACCCAGCCGCATCCCCCCGCTTAGGCAAATGCGGCTCCCCCTCGGCGAAAACCACCCGCACCCCCTGCCCCCGCAAGGTCTCCACCGCCCGCCCCACCGCAGGCTGCGCCCCCAGCGCCGTGGACCAGAACGGCGCCGCGACCACCGGCACACCGAGATGTACGGCCTCGGCCGGCACCCCCAACGCCA # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //