Array 1 55796-54402 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOEW01000051.1 Streptomyces lavendulae subsp. lavendulae strain NRRL B-2774 contig51.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================================================================================================================================================================================================== ================== 55795 37 83.8 36 ...........TGT.....AC.G.............. TGCGGTTCTCCACAGACGACGGGGTAGACCTCGCAC 55722 37 86.5 211 ..........T..T......C.G......G....... CATGCAGCCTACGCCGGGTAGCGGCCACCCCCCACCCGGAGGCAGCACTGACAATCCGGTTCACGTGCATGAGAGTGGTGCTTCGGAACCCCAAGTGCACACGAAACACGCTACCCACTCCGAAGCAAGAACAGCCAGTTCGGCACTATTTGGGCCTCGCTGTCGGCCCTTTGCACGGCCTAGGTACGCTGAATCATGCACCTCAGCTACC 55474 37 100.0 38 ..................................... GGCCTCGTCGTTCGTGGTGTTCGCGGCCCTCGCCGCGG 55399 37 100.0 36 ..................................... TGCCTCCGCTTCTGGTGACGGTGCTGGGAGCGCAGC 55326 37 100.0 38 ..................................... ACCAGGCTCAGGGCCTGCTGTGCCTGGCGACGGCGCGA 55251 37 97.3 36 ...............................T..... CTCTTCAAGTGGAAGAAGCTGATCGTCCCCGCCTTC 55178 37 91.9 37 .............T.....AC................ TCCCTGGTGGCGGCGGTGACGTCGACTCCCTTGCCGA 55104 37 86.5 38 .............T.G..AAC................ CTCGATGACGTGCTTTTCGAGGGCCCGGCGGACGTCGG 55029 37 89.2 36 ..........T..T.....AC................ CAGAGGAGACCGGCGACGAGCAGAACCAGGACGACC 54956 37 89.2 37 ..........T..T.....AC................ ACCAAGAGCCCCGACCACGCCGCGCGACGGGCTGAAG 54882 37 91.9 35 ...........T.T......C................ CGCGAGCGGCTGTGGCAATCCGCGGGTGGTCGGTG 54810 36 81.1 95 .......CT....T.-...AC..G............. TTGAAGGCGACGATGGCGTAGATGTCGACGGTGAGGTGACCGTTGCCTTTCAGGGCGAACGCCGGTTTCCCGATCGGACGGAGCATGCTGGACGG 54679 37 89.2 38 .....C.......T.....AC................ GACGTGGACCTAGGGACACCCGAGCCTGTGGAGCTGAC 54604 37 83.8 37 .............T.....AC.G.......C.....A TCGACTGCATCGAGGACAAGACGGCGCTGTCCGCCTG 54530 36 89.2 56 ..........G...-.....T....C........... CGGCAGGCCCTGACGGCGAGCTACCGCACGGCGTATGGCGCTCGTAGCCTCTCCAC 54438 37 67.6 0 ....T..C..T.TT.....AC......C....C.CCA | ========== ====== ====== ====== ===================================== =================================================================================================================================================================================================================== ================== 16 37 89.2 54 GTGGCGGTCGCCCCTCGGGGGGACCGAGGATCGCAAC # Left flank : GCCCGGACCGAAAGGCCAGGCGGGCCCGCGGCAAGTCCGATCCGATCGACGCCTACGCGGCGGCCACCGCCGTCCTGTCCGGTCGCGCGAGCGGAACACCCAAGAGCCGGAACGGGATCGTGGAAGCGATCCGCGCTCTGCGTGTGGTCCGCAAGAGCGCCGTCAAGGCACGGACGCAGACCATCAACCAGATCCGCTCTCTGATGGTCACCGCTCCCTCCGCCCTGCGGGACAAGCTTCGGGGACTGCCCACCGGCCTGCTGATCGACACCCTCGCCCGCACCCGGCCCACCGGTGATCTCACGGACCCGGCCTGCGCGACCAAGACGGCACTTCGCTGCCTCGCCCGGCGCTACCAGGTCCTGCAGCAGGAGATCAAAGAGGCCGACGCGGACCTCGCTCCCCTCGTGAGACGAGCCGCTCCCAGCCTCGTCGCCCTGCCCGGAGTCGGGACCGAGACAGCCGGCCAGCTGCAGCGCGGTGTGCACCGCGAAGGCGAC # Right flank : ATGCCAGGAGTGTCGATGGCCGGTAGTACGACTTCGAGTGGTGATCCTTTCTTGGGGATGGCCCGGCCTTCTTGGGGTTCACTGTGCCCGCGAACCATGTTGTAGGTCCCGAAGCAGACAGTCCACTGCACGTTTCCTCTTCTGCCCGTTTCTGCCCGCGGGCGTAGAGCAGAGCCACCACTTCGGCGTCGACCAGGGCAGGCCGCACCGGGACGAGAAAACGGCTCGGTTTGTCGGCCAGCACGCTTACGAAGGAATCGGTGTCGTTGAGGCGTACTCAGGGCCAGCACGACAAGTGCGGCGTTCGTAGCCCCATCCAGTGAGTCGCCCCAGGAGTGGGAGGTGCCATTGCACGAGTTTTTTGCCGTACACGCCCATCACTCTCTGGACGGCATCCCCGGACTTTCATCCGACTCCAGCGCATATTCCAGCCAATGTCGGACATGGTGGCTTTGTAGGCGAGTTCCGAGAACGTCTGTTGCTCAGCGCTGGGATCGCCT # Questionable array : NO Score: 3.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.46, 5:0, 6:0.25, 7:-1.55, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCCTCGGGGGGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCCCCGGGGCGACCGAGGATCGCAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-13.00,-15.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [33-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 58300-56804 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOEW01000051.1 Streptomyces lavendulae subsp. lavendulae strain NRRL B-2774 contig51.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 58299 37 100.0 35 ..................................... GACTGGCCGAACGCACAGCGGGCGGCCCGGACCGG 58227 37 89.2 35 ........T..........GT........T....... CTCGGGGTGGGCGGAGATCGCTCCGCGGAGCCGGA 58155 36 83.8 36 A.......T...A....A.-T................ CTCGGCACGGACAAGCGCCTGTACTGGACGCACGAC 58083 37 94.6 38 ..........T..G....................... GAGTCGATGGGGTTGCCCCGGTACGTCGTCAGCAAGGG 58008 36 94.6 38 .......C................-............ AACCGTCACCCGCGGCTGACGGTCCCCCTTGTCGGGTC 57934 37 94.6 36 ....T.....T.......................... GACGGACCTAGGGACACCCGAGCCTGTGGAGCTGAC 57861 37 100.0 35 ..................................... CTGACAACGGCGCCAACCTTGCCGGGGCCGTCCGG 57789 37 94.6 35 ........T...........T................ CCCACAGTGGGAAGCGACAGGCGCCGGGGAAGCTG 57717 37 94.6 34 ....T...............T................ ACCAAGTGGGAGGACGAGGAGACTACCAACACGA 57646 37 97.3 35 ...................G................. GTCGGGTGCTGTACCCGCCCGATCGAGCGCACCGG 57574 37 83.8 36 ..T.....T...T....A.GT................ CGCACGGACCGGCTTGAGAATGACTCCGGCCAGCTC 57501 37 97.3 36 ...............T..................... GAGGGTGTCCTCTTCGATCGGGACCCGCGCGCGGGC 57428 37 91.9 36 ..........T....T.............T....... TTCACCGGGTACTCGATCGTCTCACCGGAACCCGTG 57355 37 94.6 36 .C.................G................. TCCTCCACCCACGCGCGGCCGACGAGTGCGTGCGTC 57282 37 94.6 35 ........T...........T................ TATGTGCAGTACGACACGCGGACCCTGCCAGGGGT 57210 37 89.2 36 .C......G.....C....G................. GAGGCGGACACGTTCAGCAAGCGTGGCGTTCCGCTG 57137 37 83.8 38 .......C........A..G...TT........T... GACTTGGCCGTCGCGCGCTTGTGGGCGGACTCGTCGGC 57062 37 86.5 36 .............CG....G..T...T.......... GACTGGCCGAACGTACAGCGGGCGGCCCCGTGGCGG 56989 37 78.4 37 A.......TA......AA.GT...T............ GGCCGGCCCCACGAGTCGGCCATCATCTGGGCCGATT 56915 37 89.2 38 ............A...A..GT................ TCCGCCTCGGAAAGGGCGGTCACGACGGTGCCGAGGTC 56840 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 21 37 92.0 36 GTGGCGGTCGCCCTTCGGGACGACCGAGGATCGCAAC # Left flank : GCCAGTGACCCAGCGACAAGGTAGTAGTGATCCGGGAAGTACTCGATGTGCTGGTGCCCGCCGTCGTCCATCTCCGCAATCGACTGAACTTCGTCAGCAAGAGCCGTCAAGCCCAGCCGGTCACCCTCGATGAGTAGAGCGCTGCGCTCCGAGTCAACTCGGATACGGACACCCGGGCCGCTGGTGCTCACCACCTCGACTGAAGCCAGTTCAGTGCCCCCGAAGCTCGGTTCAGCCGAGGCGGTGGTTTCCGTGCCACCCTTCCCCGCGGCGAGGGCGAAGGCCAGGACGGCGAGTTCCGCCGCACCGCCCGAGACGTCCACCCCATCCTCATCGGGAAAGAACAGAACCCTCATCCGCCACAACCCCTTCGGTTCCACAACGCCAGACTCAACGACCAGAGCCGTTGCCCCTGGTCAACCGGGCTTCCCCGGCTCAAGGCCAGCCGTCACGGACATTACCCACCGCTTGACGAAACCCATAGGGGCACCCCCCCCCGC # Right flank : CACCAGTTCACCCGGGGTCTGACAGTGAGGATGTCCTTGGCGTCGTTCGGGGGTCTGACTCTGGGTCTGACTGACGTTTCGGCTGTCCGTCTGTTGAATTGTCGGCCGCCGAACGACGCCACCGCGTGTGCTCGCGGGTGTCCGTGACCTCGTAGGAGCTTGGCCACCAGCCTCATCACTGTCTTGTCCGTCAGCCTGGGCAGCACACGCTGCTCCGGTACCCATACGGAAGGACGGCAGAGCCGAGCATGACAGCGCCCGAGATAGCGGTGATCGGCGGAATCGACACCCATACGGACGTCCACCAGGCCGCAGTGATCGACTCGATTGGCCGCCACCTGGACACGCAGCCGTTCGAGACGAACTCGGCCGGCTACGAGCAGCTGCTGGCCTGGCTGCGTGCCCAGGGCGACGTCATCGCGGTCGGGATGGAGGGCACAGGGGGCCTACGGCGCCGAACTCGCCCGGTTCCTCACCGCCAGCGGCATCACGGTCGTCGA # Questionable array : NO Score: 5.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.21, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTTCGGGACGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTTCGGGACGACCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-14.10,-12.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [29-27] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 63429-60323 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOEW01000051.1 Streptomyces lavendulae subsp. lavendulae strain NRRL B-2774 contig51.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 63428 37 100.0 37 ..................................... CTGACGTTCTGGGCAGCGAAGGAGTCGGCGGAGGCGG 63354 37 97.3 36 ......................G.............. GCCATCGGCGCCGTGGCCTGGTGCGTGCCGTACGTG 63281 37 100.0 37 ..................................... AGCGCACCCGCATCGAGCAGCTGTCCTGGGTGCTGGT 63207 37 100.0 37 ..................................... CCCAAGCCCGCCCGGGGCCAGAACGGGAAGGGTGGCG 63133 37 100.0 35 ..................................... CACAGGCCGAAGTGGGCGAGGACACCGGTCGCGAA 63061 37 100.0 35 ..................................... CTGACTGCGAGACGTCCGCCGGAGCATCCGCCACG 62989 37 97.3 35 ............T........................ AACCCAGCAGGTCACGGCCGCCATCAGGGACGGGA 62917 37 100.0 35 ..................................... GCCGCGGCCCTGGCCCGGATCACCGACGAAGTGCT 62845 37 97.3 37 ...................G................. ACCTTCCGCGTGGGCAGGGGCGGGCAGCGCCGGGCGG 62771 37 94.6 36 ..........CG......................... CAGCGCGGCATCAGCCTCGCGACGCCTGGCCTGGAG 62698 37 89.2 39 ..........C......A.CT................ CTGCACCACCGGCTGGTCGGGGAGCTCTACGGCATCGGT 62622 37 97.3 34 ...............T..................... CCCGAACCGGGGACCCCCCGTGATGATCAGATTC 62551 37 78.4 36 .GA.T..CG....C...CT.................. GGCGCGCTCGTGAAGGAGATGAAGAAGCGCGGGCTG 62478 37 89.2 36 ........T........................T.CG TCGGAATCGCCTCGCTCCTCGGTCTCGACTGGTCCG 62405 37 97.3 37 .......................T............. CCGCTTCCTGCTCGTCGTACAGCTCGGCGGCGCGGGC 62331 37 89.2 38 T.......T.C.....A.................... ACCAGCGGCACGACAGGCACGTCGGCCGGCACGCCGGG 62256 37 89.2 36 .........TC........G........A........ ACGCTCCTCCGTCTGGCGGAAGTGGGCGGAGTCGGG 62183 37 100.0 36 ..................................... GCCGGAACGCTCGACAGCCGAGTGCGCCGAGCCCTC 62110 37 97.3 36 ...................G................. GCGTACTCCGCGATCCGGAAGGCGAGTTCGCCGACG 62037 37 75.7 33 ..............C.CACG....T.....A..A..T GTCGAGCGCGCGTGGTGGACCTGTACGACGATG G [62007] 61966 37 100.0 36 ..................................... CGGAGTTACAGATTCGGAGGTGACGCCATGGCTGTG GT [61953] 61891 37 97.3 35 .......................T............. GACTGGCCGAACGTACAGCGGGCGACCCGGTGCGG 61819 37 83.8 35 ........T.C..C.....GT........T....... CTCGGGGTGGGCGGAGATCGCTCTGCGGAGCCGGC 61747 36 83.8 36 A.......T.C.A......-T................ ATCGACGCGTCCAAGCTGGGCGCAGACACGGCCGTA 61675 37 91.9 37 .G........C.T........................ TGCACGGCGGTGCTGATTCCGGCGCCCATGCCGTTGA 61601 37 94.6 35 ..........C..............A........... CAGACCAGACCGGTGGAGCCCCGGCCGTCCGCCGC 61529 37 91.9 37 .C........C........G................. GACCACGACCAGGCCGCAGAGCAACAGCGCGCGGCGG 61455 37 83.8 37 ....AA..T..........GT...T............ CACCAGCACACGGACAACCCGATCGATACGGACTACT 61381 37 81.1 37 ........T.C...CA...GT...T............ AGGGTGTCGGCGGGGCCTGTCGTGTGGGGGAGTGCGG 61307 37 94.6 36 ..........C.G........................ AACCAGATTGCCGATGCTCTCGGCCTGGACGAGCAG 61234 37 81.1 38 ....T...A.C........G....G.T........G. CAGGCTGGCCCGGTACGCGAGCCGCGTCGGCTGCTGGG 61159 37 75.7 33 ..C.TA........C.C.C.....T.....A..A... GTCGAGCGCGCGCGGTGGACCTGTACGACGATG 61089 37 91.9 36 ..........C.......A...G.............. CTCTTCCACGTCGCACTCAGCCGGATGCGGGCCGGC 61016 36 91.9 38 ..........-..C............G.......... TTCGGGAACCAAGGTGATCCGCCCTGGCAGGGGCGGTG 60942 37 94.6 36 ...............T....T................ TTCGCGTTCGAGGCCATCTGCTCGTTGAGGCGGTAC 60869 37 89.2 34 ...A......C....................T....T GCTTCCGGCACGGTGGGGGCGACGGCCAGCTGCC 60798 37 81.1 36 .G......T.C.T......G....T.G.......... ACCGAGTACTTCACGAACACCGGCAGCGGGTCCGAT 60725 37 86.5 34 ..........C.....C..G....A........G... GTAAGGTTGTGTGTGGTCCTGGCACCGGCTGCAG 60654 37 89.2 36 ...T......C...............C....G..... TTCGCCTGCGCCGGGACGGCGGCCGCAGGCCGGGCC 60581 37 86.5 37 ..........C.T..T...G........A........ GCCGGGGTCGGCGGGTCCAGCAAGGGCGCCACCGCAG T [60569] 60506 37 94.6 38 ..............G....G................. ATCGACTGCATCGAGGACAAGACGGCGCTGTCCGCCTG 60431 37 89.2 36 ..............G...AGG................ ACCTGGACGAAGTTTCCGTCAGCAAGTCCGTCCTGA 60358 36 89.2 0 ..........CG......-G................. | ========== ====== ====== ====== ===================================== ======================================= ================== 43 37 91.5 36 GTGGCGGTCGTCCTTCGGGACGACCGAGGATCGCAAC # Left flank : ACCCAACACCTCCGCCGCCAGAAGCGCACCCGCACCCTTGTGCGGAACCCCTACCCTGCCCCCAAGACGCTCAGCCCGCTCCAGAGCAACCTGCCACGCACAACTCCCCTTCCCCACGTCATGCACGAGGGCGAGGTACTCCGCGGAAGGCCCCATCCCGAAGGCACCTCCGAAGACACACGCCAGCGAAGCAGATCCCCGTAAGTGATCCTGCACCGTGTGCCGTAAGCCGCTGACGTCGCTACGACTGTGGGCCCACAGCGGCTCGCCAGGGTCTTCGCTGTCTCCGGGTTCCACCGATAGGCTCGACATGGTCAGGCAGCCTATGAGGCAGCACTGACAATCCGGTTCACGTGCATGAGAAGGGTGCTTCGGAACCCCAAGTGCACACGAGACACGCGACTTGCTCCGAGGTAAGACCAACCGGTTCGGCCCCATTTGGTCCTCGGCGTCGGACCTTTGATCGACCTAGGTACTCTGAATCATGCAGTTCAGCCGCC # Right flank : TGACCGAGAGGGGGCCAGATGCCTCAGCCCCCCCGTTACCTTCTTCCTGGCTCCGCAATGGGGCTACCGGCCTTCGGGTCCGGCATGACTTCCCCCCCCTTGTTGCGGTTGATGATCCGGGGGGTGGTGTCACCGGGCCCGGAGGCATCGACGGACCGCTGATGAGGGGCTTGAGCACCGGCTTACCCGAGCCGGAGGAACTCTCCGTAACGTGGGTGTGGCAGCTCGGTGCCGAGGCAAGGCCGGACGAAAGCGTGAGCGGAGGGGCTCGCACGTGATCGACACCAGCGACATCGACGTCTTCCTCGGCCTGGATGTCGGCAAGGGCGAACACCACGCCACCGCCGTCACCCCGGCAGGCAAGAAGGCCTTCGACAAGCGCCTGCCCAACACCGAACCCAAGCTCCGCGAGCTCTTCGCCAAGCTGCAGGCCAAGCACGGGACGGTGCTGGTCGTGGTCGATCAGCCCGCCTCGATCGGTGCTCTGCCGCTGGCGGTCG # Questionable array : NO Score: 5.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGTCCTTCGGGACGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGTCCTTCGGGACGACCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-14.70,-15.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [81-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //