Array 1 529967-529717 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAF010000001.1 Psychrobacter jeotgali isolate Psychrobacter jeotgali YKJ-103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 529966 36 100.0 35 .................................... TGACCGCGATGATGTCGTGGTATATATCCGGTAAG 529895 36 100.0 35 .................................... TCTTCAACATAAATTGAACGAGAATCAGCACATTT 529824 36 100.0 35 .................................... AGTAGTTTGTAAATGGTCTACAATTGATTTGGGGT 529753 36 86.1 0 .....................C...T..G.G....G | C [529719] ========== ====== ====== ====== ==================================== =================================== ================== 4 36 96.5 35 GTCTGAAACCTTCCCCGATTCTTAGGGGATTAAGAC # Left flank : AAGTCTGCTGAACAGATATTCCTTGATGACTTTAGAGACCACCAAACACCTGAAGTCTTTGAGTTTTATCAAAAAATTATGACTTGGTCAGAAGAGCAAAAGCTATTAGTAAAAGAAGCTTATGAGCTTATCATAAAGCAACCTAGCGTAAAAAAAGATCCAAAGAAAAAGTGGGTAGCCCGTTTGACTTTATTAGTCGAAAAACTAAAAGACTTCGATACAGATATTGATTAGCCAGCGTTGCAAAACCGCAACCATTGTTTTACTATAATAGAGTTGCTAATTTACACTCAGTAACCCCCGTAAATTAGGGAAGTTTCAGACATTATCTGACGAAGATAAGGTGCGCTATTTAACATTTCAGACATAATACTGGTTATTTTTTGATCAACTTTCACTTGAAAATTGGTTAAAAAAACGTCAACTTTTAAGCCAATTTTTGTCGGCTAAAATATCGATGGTAGGTTATTGATTCTATTGATAATAAAACCCAGTGTACA # Right flank : GAAACAACGGAACACTGTTTCGTCCGAGTGCAAGAGAATTTGCATTTTCGCAAATTCTGTAAGACTTAGTTTAGTCTGAATAAAAAATCACAGATTTTCTACAGCAATGGGGCAAAGTAGTGCTTTGCTTTATCCCTCCTCACCCACGGTTTCTAGTGGTGAGAGACGTTAAGAAAAAGTACTGCTTTTTTAGTCTCGCAAGAGAAAGTTCTTTAAATAGAACTTTCTAGGCGTTTAAAAATTGCATGCCAATTTTAGCTTCGCAAGTAAACACCCTTAAAATAGGATTTTTTGAAGACTGATAGTATTAGTCTGAATAGACAACCGTTTAAATCGTATTTTCTCAAAGCCAGTAATTTTTATACTCTTATAACCACAATAAAGACGCCGTCTATTCCTAATAGACGGCGTCTTTGTAATTCATATAGGACTTGCAAGCTTGTCATTTTATGAGAAAGCAAGCAAAAGCGCTGATAATAGGCTCATCACCAATCGTTATC # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACCTTCCCCGATTCTTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.50,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 583200-584814 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAF010000001.1 Psychrobacter jeotgali isolate Psychrobacter jeotgali YKJ-103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 583200 29 100.0 32 ............................. ATTAATAGACCGAGCGACGCAGCTACCCGCCA 583261 29 100.0 32 ............................. CTTGCGAGGGGATTCTCCGCCGAGCCGAGAAG 583322 29 100.0 32 ............................. TAATAGTGCTTTTTTTCTGCATTGCTCATACC 583383 29 100.0 32 ............................. CCTGTCATGAGCTTGGTTAAGTGGCTAGCATG 583444 29 100.0 32 ............................. CCTTGTAACAACTCGCCGGTGCCAGATAAAAA 583505 29 100.0 32 ............................. GCAAAGATTGCTGAGCGCTACAGCATTACCGA 583566 29 100.0 32 ............................. TACCGGTAGCAACAGAAGATCAGGTGCAAATA 583627 29 100.0 32 ............................. TACCGGTAGCAACAGAAGATCAGGTGCAAATA 583688 29 100.0 32 ............................. GCCACCAGTTACTGCTAGTGAGGGAACTTGCT 583749 29 100.0 32 ............................. ATTATCGAGCCTGACGAATTAGCGAGCATGCA 583810 29 100.0 32 ............................. CGTCGTCTTTTTGTGATAACGCTTTTGCGCTT 583871 29 100.0 32 ............................. TATTCTTTGCGCATGGTATTTATCCCCCGTTA 583932 29 100.0 32 ............................. TCTTATGGAGTTTGGGCTGTAGACGTGCATAG 583993 29 100.0 32 ............................. CGTTTACGGCTCTTACTCTAGCTACATAGTTA 584054 29 100.0 32 ............................. CTGGTCTAAAACAATTTAATAGAGAGTATAAC 584115 29 100.0 32 ............................. CGTTAACTTAGAGTCTGGCCGCGCCCAAACTC 584176 29 100.0 32 ............................. CAAACGCTAAAACAGCAGACGATAAAGCAGTA 584237 29 100.0 32 ............................. ATTAGATAAAACTTACTTGATTAGTATTGATT 584298 29 100.0 32 ............................. ATTAGGCTTAACTGGTGCGCCGTCACTACTAG 584359 29 100.0 32 ............................. GACGCCCAGCGTCAGCGCGTGATTTGCGAGCC 584420 29 100.0 32 ............................. CCATGAGCCGCGATATCTTAGCGCACAACATG 584481 29 100.0 32 ............................. TCCTAGCCTTTGATGCTAATACGCTAACAGGA 584542 29 100.0 32 ............................. ATACCTGCTAATTGCTGTAATACTGTAAAAGC 584603 29 100.0 32 ............................. GTTGAGCATACTGGTAAAGACGGTGCTGAGTT 584664 29 100.0 32 ............................. TTACGTTCTAACTCTTCTTGCGCTTGGTCGTT 584725 29 96.6 32 ............................A GATGCGTGAGTACTGCTACGAGAGTGTCAAAG 584786 29 96.6 0 ...........................A. | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.7 32 CTGTTCCCCGTGAGTACGGGGATTAACCG # Left flank : CCGCCATTCCAGAACCTAAGTCTATCGGCAACGAAGGTCATCGTAGTCAGTAGATATCGATATAAGGAGATAGGTTATGAGTATGTTAGTTGTGGTGACTGAGACTATACCGCCAAGGCTAAGAGGTCGATTGGCAATATGGTTATTAGAAGTACGAGCAGGCGTATATGTTGGCGATGTCTCACGTAGAGTTCGAGAGATGATATGGGAGCAGGTCTTAGAACTGGCTGAAGAGGGCAATGTGGTCATGTCATGGGCAACCAATACAGAATCAGGCTTTGATTTTGTCACTTATGGTGAAAATAGGCGAATACCTATAGATCATGAAGGCATGCGTTTGGTACAATTTTATCCATTGGAGACTGATGAAAATTAATATCTTTAATTTCAACAACTTAATCATTCAGAAGATGAGTGATATATACTATTTAACAACTAAAAAACTTGGTAGAATAATAACAATAGAAAAATAATAATAATTTCATGGACTTACAACAAGT # Right flank : GGTCAGATTAATGATAATAGTTTATATGAGGCACTGTTGTTTATAGCATGAGAATTAATATAAGCATACAAATAATATATAAAAACCTACCTATACATTAATTTGACCACCTGAAAAGATGATACATCCTTCACATAACCAAGATTCTAATCTTCTTGCATAAGGTATATCTGCTGGTACATCAAGCTCGTACGGATGACCGCAATACTCACAGTGTATATCATCTAAGTAAACTTGACATTTTGCAAGTGTACTAAATAGTACAGAATGACTTATGCCATAAGATTGACACAGTGTTTCTACGTGAGCAATATAGTTGTTAGGCGAACTATACAACCAATACTCACGGCAAACATCTTTTACGATATCATTCAGCACTGGGTCAAACACAAAAATCAGACTCATAGCATCCTCCTTAGTGCCCATAACCAGTTTGTGGTAACAGCCCATAAAGTTCAACTTCTAGCTGATTACATATCTCATCAAGCAGATAGTCAGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGTGAGTACGGGGATTAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGTGAGTACGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 882130-878974 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAF010000001.1 Psychrobacter jeotgali isolate Psychrobacter jeotgali YKJ-103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================ ================== 882129 28 100.0 32 ............................ TGTTAAAACCCTATATGCATCGATTGAGCCTT 882069 28 100.0 32 ............................ TGTTATCGAGTCAGAAAATGCCGGCGCTGTTA 882009 28 100.0 32 ............................ ACAAAGTCAATAGACGACAGCCGAAACGTTTA 881949 28 100.0 32 ............................ TAAACACCGTCCGATCTCAAGTTGACCTATTG 881889 28 100.0 32 ............................ TCAAGCTCTTCAAGCCCTTGCACTTCGACACT 881829 28 100.0 32 ............................ TTCAGCTGGTATAGTTTCAGTCACATAACGCG 881769 28 100.0 32 ............................ CATTCATGCCCGGTAATACCATCATTAGTGAT 881709 28 100.0 32 ............................ ATAAAAGGTGTCGAAAAAACTACCCAAAACGC 881649 28 100.0 32 ............................ CGACTCAGAGAAAACACTGGATGATGTCACTG 881589 28 100.0 32 ............................ AGAAATTAAAATGACTCCCCCCGCCCATTTTT 881529 28 100.0 32 ............................ CGAAGATAAGCTTATTGGCGTCAGCCAAGGCT 881469 28 100.0 32 ............................ CAGTCCGCCGGTTGCTTCACGAAGCATAGAAG 881409 28 100.0 32 ............................ CAAATGGGTAATTGTGCGCGTATGGTCAGAGA 881349 28 100.0 32 ............................ GCTAAAACCTCTTTCACCTTGCAGACCCCTTG 881289 28 100.0 32 ............................ AAGCACTCCCATTCAGCTACCGCAAGTACAAA 881229 28 100.0 32 ............................ GGATTCTCAGCAGGCAATGCTGCGGCTGCTTC 881169 28 100.0 32 ............................ AATAAGCGCATAACCGACTTTTTGCATACTCG 881109 28 100.0 32 ............................ GCCAGCATTGCCAGTCAATAGCAGTCTTAGGC 881049 28 100.0 32 ............................ TGTCTGAGCTAATCAAGCGCTATGTGACGGGT 880989 28 100.0 32 ............................ TCATGACACTGTTGCTATTGCCGCTGCTGATG 880929 28 100.0 32 ............................ AAGACGCGGTAGCAATAGGGTTAATAATAATA 880869 28 100.0 32 ............................ ATCAGGAAGCGTAACAGTTGGTGATAAGACTA 880809 28 100.0 32 ............................ AACTACCGCAAGTACAAAACCAGCACTATGTT 880749 28 100.0 32 ............................ TATCTACAAGTGCGTTTGGACATTTATGCCAA 880689 28 100.0 32 ............................ CCATTGTCGGGCGAATAAGTCGCCGCTGTACT 880629 28 100.0 32 ............................ AAGATACAACAAGCGGTGCAAGTGCCTGACCG 880569 28 100.0 32 ............................ ACTGCGTAAGGTGTTGACCATCTCTAAGCCGG 880509 28 100.0 32 ............................ ATAAACGCATTTTTACCTTTTCTGCGCTGCCT 880449 28 100.0 32 ............................ AAAATCACGCCAAACATAAAGCGACTAATGTG 880389 28 100.0 32 ............................ CGCAAGATTTAAGTCAAGGCATGCTATGGGTC 880329 28 100.0 33 ............................ TATGACAGTGGCGCTTGCACAAGACATCATCGA 880268 28 100.0 32 ............................ GTGTAAGCCGGTATGATTTCAGTCACTGGCTC 880208 28 100.0 32 ............................ CGATGGTCGAATAGTACAGATTGGCATGACTC 880148 28 100.0 32 ............................ ATTTGCAGCTTAAAAACTGCACTGTTGATGTT 880088 28 100.0 32 ............................ TTTCAGCAAGTCGGTGCCCAAATGCGCAATAT 880028 28 100.0 32 ............................ GCCCTTAGTGCCCTCAGTCATAGAGTCACCAA 879968 28 100.0 32 ............................ AACAAATCAAAAACAGGTACAATCACCTCACC 879908 28 100.0 32 ............................ TATCGTCAATATGATCAATTGGATACCGACTA 879848 28 100.0 32 ............................ AATGTCTGATGATTTTAGCGTCGAATTTCAAG 879788 28 100.0 32 ............................ TTGGTTTCCGTCTGTACTGAACGATGAGCGTA 879728 28 89.3 32 .....C......G......G........ TATATTTGATGAGTTAATGGGTATTAGTACTC 879668 28 89.3 32 .....C......G......G........ TGATCTAGCAGCCGTCACTTACTCTGTCTACG 879608 28 89.3 32 .....C......G......G........ GATATTCGCTATCTAGCAAGAACGAAAGCACT 879548 28 89.3 32 .....C......G......G........ AACATGCGCCATAGTTTTAGCAAAGTTATCAA 879488 28 89.3 32 .....C......G......G........ TATCGAATGCGAACCCAACCACCTGTAGGAGT 879428 28 89.3 32 .....C......G......G........ TATATCAATGAGATTGCAGGATTCTCTATTCA 879368 28 89.3 32 .....C......G......G........ TGCTTGCCCGGGGTCTTGCGGCAATCTAATCT 879308 28 89.3 32 .....C......G......G........ TCTAAATTCCAAATTGCGTTATGCGTTTAAAA 879248 28 89.3 32 .....C......G......G........ ACGTACCTGTCAAACCATTAGTCTTAGATGAC 879188 28 89.3 32 .....C......G......G........ AGTGCCGATAAACAAAGCTGCACCGCCTAACG 879128 28 92.9 96 ..........................GC AGCGTTAAAAAATTGTATGCCAATTTTAGCTGCGCAAGGAAAATCCTTTAAATAGGATTTTCAGGAGTTATGACTTCAAACGAAATTTGATAAAAT T [879102] 879003 28 82.1 0 AGAT.C...................... | G,T [878976,878979] ========== ====== ====== ====== ============================ ================================================================================================ ================== 52 28 97.5 33 CTTCATCACCGCATAGGTGACTTAGAAA # Left flank : CGCATGTGAAGCGCATCAATGGAGTTGGTGACAAAGCCAAAGGGCACGTCGTAGTCAGACGCTACCGTCATAAAAACGTGCTCAAGCAAGCTGAAGCGTTCGCTGAGCACAAAGGCATTGCTTTGGAGGCGGCGCTGATACACTGCGCCAAACACAAGCAGGATAATAAACCCTATCCGTATATCAACTTAAGAAGCATCAGCAATAATCAGCCTTACACCTTATCTATTATTCAAGAGATGGTAGATAACGAGGTCAAAGGGTCGTTTAATAGTTATGGCATCAACAATGCGGCAGATACGGTTACCGTACCACATTGGTAAGCCACTAAAATAGTCATGACGAATGACCCAAAAACTGGGCAAAAAACCCTTTTTTTGAGCTGTTTAAAAACTTGTAATAAAATCAACCAGTTACGACAGGGGTAAAAATGGAGGGTAAAATAGGGTATTTTGCCTTCTAACCCTTGTCGTAATTGATTTTTTTGAGTTATAATTCCT # Right flank : CTGTCAAAAATTGCATACAAATTTTAGACTTGTAACTCTGTGATATCAGTAGCAGCATGTATGGATTTAAGCTTTCTTTGTGGTCTATCCTGAATATCTATAAGAATACGCCCCGAATAAGTAATAGCACTTTTCTTGAGTAGTTAAGACTCAGCACTCTTTTCGATTACTAAGGTTATTACTAAGACTTAGGCAAGATAATCTCTACTATTAATCCTTGAGTATCATCCTCTCTATTTTTAGCAGTAATTTGTCCCTTATGCGCCATAACTACAGCATGCACTATCGCTAAACCTAAGCCGTAACCCCCAGTTTGGCGATGACGCGCAGAATCAAGGCGAACGAAGGGTTGAAAGATACGCTCCAAATCCTGTTCAGCTACCCCTTCACCTTCGTCTGCTATGCTAATCTTAATGGCTGGTCGCGCATTATCCATCTGTACTTTGGCTATCTTAGCGCTAACCACTGAGTCGGGTAAGGTATGCATAAAGGCATTACGA # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 4 1441285-1442638 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAF010000001.1 Psychrobacter jeotgali isolate Psychrobacter jeotgali YKJ-103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================================================================= ================== 1441285 28 100.0 32 ............................ GTCGATATGCAGAGCTATGTTGTCTGTATTAT 1441345 28 100.0 32 ............................ TGTGCGCAGACTAGCTCAGCTGCTAATACCTG 1441405 28 100.0 32 ............................ TAGCATGTCGGTATACCCGTATTGTTCAGCTA 1441465 28 100.0 32 ............................ AATTTTAGAGATTAATATCATGGCCAAAACCA 1441525 28 100.0 32 ............................ ATTATGAACAAACTCAACTTTATCTTCTCGAA 1441585 28 100.0 32 ............................ TGCGCTTAGATACACCGCTGATTTTAGATATA 1441645 28 100.0 32 ............................ TGTCATCGTAGCGTTTAATGCGCATAATCTAA 1441705 28 100.0 32 ............................ CCTACGCCTTCAAAATCAGCAACCGACACACC 1441765 28 100.0 32 ............................ CGATGGCGGCCGCTATTAGTTTATTAGTCTCA 1441825 28 100.0 32 ............................ TCATTTACAAGGCGCTGAATAACGCTGATGAC 1441885 28 100.0 32 ............................ TGAGACGCAAATCTATTTAATCTCACCACTGC 1441945 28 100.0 32 ............................ TACTATGAGGACAGGCGTAAGGTGTCAGGCAG 1442005 28 100.0 32 ............................ ACGCTACTTGCAGTAAACGAATTAAAAACAGT 1442065 28 100.0 32 ............................ TCATATATTAGTATCACTCAGTTAACCGCAAT 1442125 28 100.0 32 ............................ AGTGTCATACTCATAATCTAGGCAACCTTTTA 1442185 28 100.0 32 ............................ TGGTACTTGCAAGATACGTCTATGCCGGTCAA 1442245 28 100.0 32 ............................ GCTCACAAGCAAAGTAACATAGATTGCTTATC 1442305 28 100.0 32 ............................ CATTAGCCTCAGCTATAGCGTTCATCACATCA 1442365 28 92.9 157 ..........................GC AGCGTTAAAAAATTGCATGCCAATTTTAGCTGCGCAAGGAAAATCCTTTAGATAGGATTTTCAGGAGTCATAACTTCAAGCGTAACCTGAATAGGAAAATCATAGATTTCCCCTTGCGATGGGCTGAGCACTTCCCAAGTGCTCAGAATACCCCCAT T [1442389] 1442551 27 78.6 31 ..C.CA...T-T................ AGCGCCGTTACATTATCGGCGGCCATGGCAG 1442610 28 96.4 0 ..........................G. | T [1442634] ========== ====== ====== ====== ============================ ============================================================================================================================================================= ================== 21 28 98.5 38 CTTAATCACCGCATAGGTGACTTAGAAA # Left flank : ATAAAACAGGTAAGGTGCAACATATTGGTTATGATGAAGCGGTTATGGAGGTGGTCATTCCACTGATTAAAGCGTTCAACTGCGACGGTATCGTCAGTGTGCAGACCAAAGCAGATGATAATGGTCAACACTGCGTGCTTGAGATCAATAGTCGTCCCTCTGGGGGCATTGGCTATACGGCTCATAGCGGCGTGGACTTGACCCAAGTCGGCTTTGGCTATTGGCTTGGTTTGACTGACAAGCCTAAACTGGCGAATATCGTTAAGCAAATTAAACCCTGTCAGGTACGTTCGATAATGACCAGTGTAAAGATTGAAGATTAACGATAAGTAACTCTTCAGTTTAACTGTGATACTTAACCCTAAAAAACCCTTTTTTTAGGCGCTATAAAAAATACCAACAAAATCAATAATTTATAATAGGGCTAAAAATGCAGGGTAATTTATGGTATTTTGCCCTCAACGCCTTGTCTTAACTGATTTTTTTGAGGTATAATTCTT # Right flank : AGCCGTTAAAAAATTGTATACCAGTTTTAGGCTCGCAAGGAAAATCCTTTAAATATGAGAACCGTTAAAACAAAGCACTGCTTTGTTAGGTTTGCAAGGGAAATTCTTTAAATAGAATTTCCAAACTCAGAATTCATGCTTCTAAACGCAACTTGATAAAATATATTTCATCGCCTAAGCGGCTTAGAAGTTATAACTCTAAACGTAACCTGAATAAGAAAATCACAGATTTCCTCTTGCGACGAGCTGAACATTCCTCGAATCTTCAGAATACCCCCATCTCACACACTCATAGGTGACTTAGAAAAAATGGAAAGATAAAAATGAGTGTTTAGTCGCATAAACGTTTTTAGATAAAAACGTCCAGCGAGAGTGATTGATTATGAAAAACTTTTAAATCATTCATTTAGACTTCTGTCTTCATCAACGCATAGATGACTTATGAGCAGCGTTAAAAGCTCAGCTTATGCTTGTTTCTTTATCCCTTCTCCCTCTAAAAA # Questionable array : NO Score: 2.62 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.56, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAATCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //