Array 1 1952-701 **** Predicted by CRISPRDetect 2.4 *** >NZ_STGJ01000042.1 Crenobacter intestini strain GY 70310 Scaffold41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1951 29 100.0 32 ............................. ACGCCCGAGTACCTGTCGCGCCAGGCTACTGA 1890 29 93.1 32 ..........................G.C ACCTGTACCACGGTCACAATGTCGGATTGCGA 1829 29 100.0 32 ............................. ATGGGCGACCGCGCCGACGACATCCTCGAGGC 1768 29 100.0 32 ............................. GTTTGCGGCTGCTTGTCTGCGGCCGCCGGGGC 1707 29 100.0 32 ............................. AGGCGATCAAGCTGGTGCAGACCCGCCAAGGC 1646 29 100.0 32 ............................. GCACGGCGCATGCCTTCCTTGGCTACGACAAC 1585 29 100.0 32 ............................. CATTACGCTCCTCGTTGTACTCATGCTCCAAC 1524 29 100.0 32 ............................. CAATCGGATTATTGCAGATCAAGCGCTACTGC 1463 29 100.0 32 ............................. ACGGCGAGATGATGCCGTGGATTACACAGTTC 1402 29 100.0 32 ............................. AAGGCCGCAGCAGCGCGCAAGCAGGCCTTCGC 1341 29 96.6 32 ............................C GCCTTGTGCTGGATGAGGCTCACTTCGGAGTC 1280 29 100.0 32 ............................. AGAGAGATGACTACATGATTATGCTGCCAGGT 1219 29 100.0 32 ............................. ACTGGTGGATGGCCAACAGCCTGAACACGGTC 1158 29 96.6 33 ............................A GGGCTCGATGCCAAGTTTTTCGGAGGCCTTGAC 1096 29 100.0 32 ............................. AAACCGAGTGTCGCCGCAACCTTGGCGGACGC 1035 29 100.0 32 ............................. GTTAAGCAACATGGCAACTACCCGTACCGCTC 974 29 100.0 33 ............................. TTCGGCCAGAACCCGCCGTCGCGCTGGTCGGCC 912 29 100.0 32 ............................. TTTCCGGCAAGGCGTGCGACATCGGCCAGCAC 851 29 100.0 32 ............................. TACGGGGTGAGTGCCGGCGGTTGGCTGTCGCA 790 29 100.0 32 ............................. TCACCCCGTCTTTAAGGGGCGAATGACGCGGA 729 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 21 29 99.3 32 CTGTTCCCCGCGCCCGCGGGGATGAACCG # Left flank : GTAGAGTTTGAGAAGCAATATTTCCAACGGCTCAAGAGTGTCTAGAGAAGCCGGGGCGATTCAG # Right flank : GATTAATTTCAAGCGGCCGCACCTGCTTGAAGCTGTTGAACAACTGTTGGATGACCGGCAGGCGGATACGGTGGCCGGCCGCGAAAGTAGTGGTGCGGCCTCGGTAGTGCGCGGTCGAGGCTGGCTACTAACGCGGCAAAGTCCACATGGCGGCCCAGCGACTCCAGCGGATCAGACAGGCAGCTCAGAAAAAAGCGTCGCACTGGTGCTGGTGAACCGCCACTCTCTCAGCGGGACAGGCTGCTCAGAAATCGTCGGTGAGATCGTTGGAGCTGTTGTGCGTGTTCATCGCCGGACAGGCAGCTACTTCGGGGCGCAGTGCTGAGATGGGTTCCTTTGGTGAAGAATGGATGGTGTTCACGCCGTCTGATGGTGTGATTCATGTCAGCCCGACAGGCTTGGAAGGGTTGAAAGTTGCTACACTGGCTGCTACATTGACGACATGTAGCAAGTCGCTGAAACCCTTGAAAACACTGGGTTGTAGCCTGATCTCGTGGAAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //