Array 1 53239-53592 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011158.1 Moraxella ovis strain 199/55 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 53239 36 100.0 26 .................................... AGGTGTGCAAATTCTCACATCAAATT 53301 36 100.0 29 .................................... AATTTTAAGTTCTTGGCTTTTATTCTGGA 53366 36 100.0 28 .................................... CTTGTGGACCTTGTGCGAAGCGTAGGGC 53430 36 100.0 28 .................................... GTGTTATACGCTCTGTGACTCTCTGGTA 53494 36 100.0 26 .................................... CGCCGCCTCGCATGCTACTCTATGCT 53556 36 88.9 0 ..............................T.TA.G | C [53585] ========== ====== ====== ====== ==================================== ============================= ================== 6 36 98.1 28 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Left flank : TGGTTTTGATGTTGCCAAGTTTTGACATGCAAGCAAATGGAGGAGATATATGATAATCGTCAGTTATGATATCAGTGATAATAAGGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGATAGATTGCAATATTCGGTGTATGAAATCCAAAACAGCGAACGCATTTTAAATATCATCATCGAAAAAATAAAAGCAGAATTTGAGCCTTTATTTACAGGGGCGGACAGTGTCATTATTTTTCGATTTACAGAACGTGAAGTATTAAGGTTTGGCCATGCCAAACATCGCAATGAGGATTTGTTGATTTTATAAAAAGCCTTGGAAAAAATGATGAGGTTTGTTATAGTAAGAGAGCTAAAGCACGCTCAAATATTTACTTTGCAAACCTCAGTCTTAATGCGTGATTTATCATGTTTTGTCGGTAAAAATGATTATTTTTTGTGCAAAAAACTTGCTAATCTCTCAAAAAATCATTAAAAATACCCCAAAACGG # Right flank : GGCATGAGAATTTAAATGGCTGCGAAGATCAAAAGGCATTATTTCATTAAAATCCCAAAATCACAGATTTATTTTTCTAGAACACTTGTATCTTACGAATTATGATTTATAATATTAATTTATACATATATTACTAGGATTTATAATCGTGAGTACTACGCTGCGCCAGTTGCGCGCTTTTGTGTTGGTAGCTGAGCAGAACAGCTTCACTAAGGCTGCTGAGACATTATGCCTGACGCAATCCGCCTTAAGCGGTCTGATCAAGGAGCTTGAGCAGAATTTAGACGTTAAGCTGTTCGATCGCACCACACGAAAATTGCACCTATCCGATGCGGGCATGCGCTTATTGCCGCAGGCGCGCCGTGTGCTCAATGAGATGTCCGTGCTTAATGAAAAGGTCTCCAACCTAAAGTCCTTGCACCAAGGACACATTCGTCTGGCGGTCTCACAGCAGCTATCCGCATCGACGATGCCTAAGTTCATCGCTAAGTTCTGTGAAC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 903972-905051 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011158.1 Moraxella ovis strain 199/55 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =========================================== ================== 903972 32 100.0 34 ................................ GTATTTTTCTCTTAACTTCTGTTCTGCGTTGCGG 904038 32 100.0 33 ................................ ATAATATCCCTAATGGTTATCCAGTTTGTAAAA 904103 32 100.0 34 ................................ ATCTTCGTCAAAACCATCTAAATAATCACGCAAA 904169 32 100.0 34 ................................ GCGTCATGTAATATTTATTTATATTATATATATA 904235 32 100.0 33 ................................ TATCGCTTTGCTAAATTATTTTAAGCCGCTTAG 904300 32 100.0 34 ................................ GCGTCATGTAATATTTATTTTTATTTATATTATA 904366 32 100.0 33 ................................ GTCTATTTGCGCTTATTATAACGCTCGTCTTAC 904431 32 100.0 34 ................................ TTACCGTCCTGTCAATGACCGCCGATGCCAGTTA 904497 32 100.0 33 ................................ AACAGCCTACAGACTATTTTATAATTTTTTGGC 904562 32 100.0 24 ................................ AAGCCTGCTTATTTTATCCCCCCC Deletion [904618] 904618 32 100.0 33 ................................ GTGTCCAGTCATTATAGCCTCCTTATGGCTTGA 904683 32 100.0 33 ................................ TATTATTTTTTTATTTATTTTTTTATTTATTTT 904748 32 100.0 34 ................................ CTTGTAAAAACCCCTGTCAATCTCTCTCAATAGC 904814 32 100.0 43 ................................ AGCGGCGGCGATGAGCTGGGCTTTGGTGTCGATGTCGTGTCGT 904889 32 100.0 34 ................................ CAGTGACTGGATAGCCGTAGGGGTACATGGGATA 904955 32 100.0 33 ................................ GACAATCAAAGCTTGATGGGAGTGAGTGATATT 905020 32 96.9 0 ........................A....... | ========== ====== ====== ====== ================================ =========================================== ================== 17 32 99.8 34 ATCGCACCCCATACGGGTGCGTGTGTTGAAAC # Left flank : GATGATGAGATATGTTAATGTTAATCAGTTATGATGTGGCGATGGATGACGGCGGGCAAAAGCGCCTAAGGCACATCGCCAAACATTGCCAAGATTATGGCGTGCGAGTGCAGTATTCGGTGTTTGAGTGCGACATCATGCCCGACCAATGGGTGGTATTAAAAGACAAGCTATTAAAGGCGTACGACCCTGACAAGGACAGTTTGCGGTTTTATCATTTGGGCAGTAAATGGCGTGGCAAAGTGGAACATCATGGGGCAAAAAAGAGTGTGGATTTGTTTCAAGATACGCTGATATTGTGATAAAAAAGAGGTAAATCGTGGCTCGCTAACGGGCAGTTCTCATCAAAATACAGGCAGGTTAGCGATGAGCTAAGTTTTTGAATTATTTAACAATTGAAAATAAAAACAAGTTCATTTATAATCAATGGCCTTTTTAAGGCTTAGGTTAGCGATTTTACCCATTCTAAGCCTTAAAGATATAGCCTTTAAACAAAGGCT # Right flank : CTCAATATCTTAATTTGATTCAAAAGTCCTATCGGGATTGGAATAGGCAAGGCAATAATTCACTTGATTTTTCTTCATCTTTTGTTTGATTTATTTTTCTATTTTACTGGATTATTTTCTAAGTTAATGCCTGTGCAATAAGAGGGGTTAAATCGTTGTATCTAAGTTTTTAATAATCACCATTATAAGAGCGGCAAACAAGTGATTTTATTTAGCTTAATTTAAGAAATGCTTTGTTGTTTTTTAAGTGTTTGCTTTAAGTTGATGGTCATATTGAAGTCGTATGCAAGGCATACTATAATGTGACCTCTTAAAACATATATTGATTGCAAGGTTAGATCATGATAAAAATCGGTCAAGGCATAGATGTTCACGCTTTTACGACAGGCGATTTTGTAACGCTTGGCGGTGTGCGTATTCCTCACACGCACGGCATTAAGGCTCACTCAGATGGCGATGTGTTGTTGCACGCTTTGGCGGATGCACTGCTCGGAGCGTTG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCCATACGGGTGCGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //