Array 1 3100613-3099140 **** Predicted by CRISPRDetect 2.4 *** >NZ_POWA01000006.1 Enterobacter cancerogenus strain FDAARGOS_232 unitig_0_quiver_quiver_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3100612 28 100.0 33 ............................ AGTCGCTCGATATCTGGCACTTGTCGCAGAAAT 3100551 28 100.0 32 ............................ AATACCGGGTCTGTTAGATGACATGGAATATT 3100491 28 100.0 32 ............................ CCGGCCGCTTCGGCCGCCAGGGATGCTGTCGC 3100431 28 100.0 32 ............................ AGATGAGCCTGATGGTGGCGTGGCGGCTCTGG 3100371 28 100.0 33 ............................ ACCCAGACGACTGCGTACTTCAGCATCCCATGA 3100310 28 100.0 32 ............................ GAAGGCATTGCTGAATCCGCGCTCAGAAGCGT 3100250 28 100.0 32 ............................ ATCGCGAAGAAAGCTGCCGAAGGGATGGGTAT 3100190 28 100.0 32 ............................ ATTTCTGGCGCGGCTGTTACAACACTTCGATG 3100130 28 100.0 33 ............................ TGGGATGCGTCAACGAACACCTGGGACCAGGAA 3100069 28 100.0 32 ............................ GCGCTTCAGTAATTTATAGTCACCAGGGGAGT 3100009 28 96.4 32 ..........A................. AGGTGGCGCATGTTTGCCACGTTCACCACATC 3099949 28 100.0 32 ............................ AAAGGCCACATCGCCGCAAGATGCTCGTTACT 3099889 28 100.0 33 ............................ CGACAAACTCGGTATGATTTCTACTGGCCTACG 3099828 28 96.4 33 .....T...................... CATTACTTCCGCGGAAACGAAAAGCATGAAGGC 3099767 28 100.0 32 ............................ ATAAACTGGCGGTGTATAGAGACATACCCCAT 3099707 28 100.0 32 ............................ ACGGATGGACGTTGCAACGTTGGCTTCGGATT 3099647 28 100.0 32 ............................ CGTTACAGACGCTGGTTATGCCTGGCATTCTG 3099587 28 100.0 33 ............................ GTCCAAAATCACTGGCAAGATGCGCTCTACCGA 3099526 28 100.0 32 ............................ GCGCGGTGCAGCGGTCGCGGCATGCTAGATGC 3099466 28 100.0 32 ............................ GTCAAAACTGCACACGTCAGACCAAATCGGGA 3099406 28 92.9 31 ...T.........G.............. GTATCGGAAAAACCTACGGGCAGCGCATGAA 3099347 28 100.0 33 ............................ CGCCCACTCCGGCAGTAGCGACGTTCCTTGGAA 3099286 28 96.4 32 .........................T.. GGGACATTATTGCGGCAGCCACAACGGCTCTG 3099226 28 92.9 31 .......................TA... ATAAACCAGCCGACAGTGCGCCGCACCGCTA 3099167 28 67.9 0 ......C...C.G..AA..A.CC.T... | ========== ====== ====== ====== ============================ ================================= ================== 25 28 97.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TGCGATGGGCGCGCGTCCGATGGCGCGAGTGATTCAGGATAACCTGAAGAAACCGCTGGCGAACGAGCTGCTGTTTGGCTCGCTGGTGAACGGCGGCCAGGTCACCGTAGCGCTGGATCAGGCGAAGAATGAACTGACCTACGACTTCCAGAGTGCGGCGAAGCACAAGCCGGAAGCGGCTCACTGATTTTAAACATCAGTCTTAAAAACCGGGTGAAAGCCCGGTTTTTTTATGGCTGGACAGAAGCCAGTTATATTGCGCGCGCATCTGCCTCCTTTTTTATAAAAGGAGAGGGCGAGGTGAGGGGGGATATTTCTGGGGTGGGATTATGGAGGTTTTTAAACTTTTCACTTCCTGCATTTATGGGAAAACCCTTTTTTTAAACCCTTTCGTAAGATATTGATTTATGGTTGGGTTATTTGAATGCCGGAAAAAGGGGTTTAAGTAGGAATATTGATTTTAATTTTCTGAAACAATAGGATAAGTGAGTTCTCTTCCA # Right flank : TCCCTACAAATTCCCGACAGTAATTCATCACCAAAAATAATATATTCAATCAAGAAATTAATCATTTCTCCCTATATCATTCATCCACTCATCACACCCATATAAAAACGAAAATATGTATATTTATTTTGTATGGATAATTTATTTATATGAATGCCAATAATGATTAATAACAAAATTAAACAGTTGCGTGCAAAAATACCTGTCAACATCACGACTTATTTGAAATAGATCACATCCAGGACCTGCAAAATGCCGATACCATAAACGCCATTGATATTTCATTTGATCTATTTTATGTCGCAGCCAACTATTACCCCCTCAGATTTGAAAACGATTCTTCATTCTAAACGTGCAAATATCTATTACCTGGAAAAATGCCGCATTCAGGTGAACGGTGGGCGGGTAGAGTATGTCACGCAGGAAGGTAAAGAATCGTTTTACTGGAACATCCCCATTGCGAATACGACAGCAGTAATGCTCGGAATGGGGACGTCGGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3115755-3114944 **** Predicted by CRISPRDetect 2.4 *** >NZ_POWA01000006.1 Enterobacter cancerogenus strain FDAARGOS_232 unitig_0_quiver_quiver_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3115754 28 100.0 32 ............................ ATCCAGTCATACGCAACTCATTCCCAGTAATT 3115694 28 100.0 32 ............................ GTATGTTCTCGCGCCAGACGCGTTATGATTTC 3115634 28 100.0 32 ............................ GCCAGTCTGAACATCTGCAACACTAGCAGTCC 3115574 28 100.0 32 ............................ CTAATTCTATGGCTTTCTCGAGGTTCCGTGGG 3115514 28 100.0 32 ............................ CCTCTGCCGTTCGTAAGCATTTCGAGAACGAT 3115454 28 100.0 33 ............................ CGATAAAAAGAAGGTAGGCGACGTTCTCCTGAT 3115393 28 100.0 32 ............................ TCTGCGCTTTCAGATGGTGCTTTGTCGCTGTT 3115333 28 100.0 32 ............................ GATGCTCTTACAATTAACTCACTTCGTGAGGC 3115273 28 89.3 32 .........A.T.C.............. ACTATCTTTAATAGTGGACTCTTGTCCCATAT 3115213 28 89.3 34 ...........T.C.........T.... TGCCGCACCTCGTCGGCACCGGCCACAACTGGGT 3115151 28 92.9 32 ...........T.C.............. ATAGATGCGCCCTGGGCATCACCAGCAAATGC 3115091 28 89.3 32 ...........T.C....G......... ATCAGGCCAACGCTCCCCAGTTGGTTAATGAC 3115031 28 92.9 32 ...........T.C.............. ATGACGCAGGCCGCGCAGCTTCTTACCGCTAC 3114971 28 82.1 0 .......A..CC.C..........T... | ========== ====== ====== ====== ============================ ================================== ================== 14 28 95.4 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : CCGCACGATCCCGCACAGACCGCCAGTTCACCCGTAAGCTGCGCTTCTGCGCCTGCGGCAAAGGCGGCAACCTCCTCATGGCGGGTCGGCATCCATTCGATGGTTTTCATCTTATTGAGGCTGTCGCTGAGTCCGTTCAGGGAATCGCCGGTGACGCCCCAGATACGTTTTACGCCAGCCTGTTCAAGGGTTTTCGCTATGTAAGCAGCCACGGTTTGTTTCATGGGTGTCCTTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGGCGCATTGCCCGTTAAATCCCCCGCTGCGCACAGCGATTTGCGGGGGCGTGGGGGTGTTGTTCATGGGGAGCTGCTGCGCCAGTGCGGGTGAAAACCCTTTTTTTTAGAGCATGTGTAAGTTATTGATTTTTCATGGGGCGGTGGAGGTGCCTGGAAAAAGGGTGTGCAGAAGAAAGTGAGGGGATAAGATTTATTTTACAATGAGATAGGTGTAGATTGTGTGA # Right flank : TACCCACCCACACTCCCCGTAGGTCGGGTAAACGCAGTGCCACCCGACAAAAAAGCCCGGTGGCGCTAACGCTTACCGGGCCTGTGAGCGAACCTTTACGTTTTATGCGAGGACAAGATCGCCCTGCGGATGACAGGAGCAGGCCAGCACATAACCGTCGGCGATTTCTGCGTCCGTCAGCGTCATGGTGCTGCTCACGGTGTACTCGCCGGAAACCACCTTCGTCTTACAGCAGCCGCACACGCCAGCGCGACAGGCCGCGGCTACCGGCACCTTGTTGCTTTCCAGCGCCTCCAGCAGCGTGGTGCCCACGCGGCCAAAGAAGGTTTGCGCAGGTTGCAGCTTAGTGAACTTGATCCCGCTGGTTGCCGCTTCGGCGACAGGCGTGAAGAACTGCTCTTTAAAGAAGCGGGTCACACCCAGCGCTTTAATCTCTTTTTCCACGATATCCATATACGGCGCAGGGCCGCAGGTCATCACGGTGCGGGAGGCAATATCCG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //