Array 1 67767-69408 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXIG01000010.1 Arcobacter ellisii strain CECT 7837 NODE_10_length_111765_cov_92.6004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 67767 37 100.0 32 ..................................... ATAAATTCTAAATTTTGCATTTCAATCCTTTT 67836 37 100.0 40 ..................................... ATAGGTCTGCATTTTTTTGATTTTTTTTTATTTTCATTTT 67913 37 100.0 36 ..................................... ACTTGCAGCGTGCTGAGTTAAGTTAATTGTTTTTGA 67986 37 100.0 36 ..................................... TTTTTAATGATTTTATGAAAATAGGTTTTCTATTTT 68059 37 100.0 37 ..................................... ATTATTACAGTCTTAATTCCCCTTTTCCAAAAGTTAG 68133 37 100.0 37 ..................................... AAATTTCTCCTGCAAATTGTTTTTGAAATTCTAATAA 68207 37 100.0 38 ..................................... AATATACTCCTCATCCATTGTCCCATCATTTTTGTGAG 68282 37 100.0 35 ..................................... ATCCGTGAAAATGAAACAATAGTTCTTTATCTTTT 68354 37 100.0 39 ..................................... AATTAGGGCATTTTTCTTCCATTTGCCAGATAAAAATTA 68430 37 100.0 33 ..................................... CATAACCTTTCGGCTACTGTATCTTCACCATAT 68500 37 100.0 37 ..................................... ATTAATGCTTCTCCCCATATTCCTACAGAAGAAGTTT 68574 37 100.0 35 ..................................... TCTTTTATTAAAGAAATAGTTTCTGTTAAAAAATC 68646 37 100.0 34 ..................................... AAATCTCCACTGCAACAATATTATTTTCTGCTTC 68717 37 100.0 33 ..................................... ATCTTGTGCTTCTTCGTTAGCTGTTTTTATAGA 68787 37 100.0 36 ..................................... ATTACTACAGAAACAGCCAAAAGAGGAAAAGAAACA 68860 37 100.0 34 ..................................... AACCAATTGCGATTCTTTTTTCATCTTCCGTTAA 68931 37 100.0 34 ..................................... AAGTTTGTGCAGCAGCAACTGGACTATCCCATGA 69002 37 100.0 33 ..................................... TGGTTTGGGTTATGACCTTGACCTTGGTTTGGG 69072 37 100.0 39 ..................................... GATCAATTAGATGTTCTTCAACAAATTCATCAAATAGTT 69148 37 100.0 37 ..................................... ATTTGCAGAACCTATGTATAAGTCTGATTTTTTGTTG 69222 37 100.0 38 ..................................... AAATAATCGCTTTTGCTCTTAATTTAGGTAATTTATTT 69297 37 100.0 38 ..................................... GAATACAACTTTGCAGTTTCAGCATAAGTGATCGTGTT 69372 37 97.3 0 ...........................G......... | ========== ====== ====== ====== ===================================== ======================================== ================== 23 37 99.9 36 GAAAACCTCTCTCCAAGAGAGGTAGTTATTTTGAGAC # Left flank : ATCATATATGCCAAAGTTGTATTCCAAAATCTTTTGAAATATGTGATAAAGCTGATATTTTTGAATCTCAAGAGCTTTTTATTTGATTTAAAAAAAGAAAAATCGATTTGAGAACTTTTTTAGCCCATTTTATGGCTCTTTTAGTTAAAATCACTTAATTAAAGTTAGCAAAATAGGTTTAATGAAAATCTATCTTTTGAGATTTGCGAACTTTTATTTTTGATTAAGTTTAAAAGAGCCATATTTGTGCTCTTTATAAACTTATAATTTTATAAAAAATAGAAAATCTCAACTTTTCAAAAAATCAAAAAAAGGTTTGCGAACTTTTTTCTTATTTAAAATGCCTAAAATAGGAGATATTTAAAAATTTATTGTCAAAATGATGAAGTTGTATTTTAAAAAAGGATATACTTTTGCGAACTTTTTACAAAGATTGATAAAATGAGAGTTTGAAAGATTTTGATTAAATTTTAAATTTTTAAATAGCCCATTTTATGGCT # Right flank : CACAATAGGTAATCTTTTTTCATAAGCAAACATTATGAAAACCTCTCTTCAAAGAAAGAAAAATTTAACGAACTTATATTTTCGTTATAAAAATGTATATTTCCATTTTAGATTTATTTAAAAAAGGAAATATACATTATGAAAATATTTTTAAATTTTGCAATTTTTATCATTTTGATTTATTCTTCTATAAAATTACATAAGTATTTACTTAAAAAATATAATAGTTCACCATTTACTCTGTTTAATGTAGTTTTATTTTTTGGTTCATTTTTTATTACCTCTTTTTTAATCTATTTTTTTGAAAAATAAAATAAATTCAAATATAAAAAAAGATAAAATGATATTATTTATTTAGGACTAATATGATTTTAATTTCACTTCTTGGTGTTCACGACTCTTCAATTTTCCCTATTCTTTTCGAATTTAAAGACAAAATCAAAAAACACATTATTATTCATGATGACTCAAAATATGAAAAAACAATTATAAAAAAAGTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAAACCTCTCTCCAAGAGAGGTAGTTATTTTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //