Array 1 23014-22529 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOM010000008.1 Trichocoleus sp. FACHB-832 contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 23013 37 100.0 43 ..................................... AGTCAATTTTCCATAGCAAGCCCCGCCAGAAGCGTCTGTTCTG 22933 37 100.0 37 ..................................... ATCAAAATACCTGTTGAGAGCTGCGGAAAACCCTTCA 22859 37 100.0 35 ..................................... CCATAAAGTATCCTAGTAGATGTAATGCCAGAAAA 22787 37 100.0 36 ..................................... TTGAATCGGCTTTAGGCGATCGCGCACTTGACAGAA 22714 37 100.0 36 ..................................... AGTGTGTGAGTCCGTGTCTTAGCCCCAGATTTCTGA 22641 37 97.3 38 ....................................A ATTTGGCGGTTTTCCTCCGTTTCATCCCATCCCATACC 22566 37 75.7 0 .........GAT..TT.C.G.....A..........T | G [22544] ========== ====== ====== ====== ===================================== =========================================== ================== 7 37 96.1 38 GTTTCAACGACCATCCCAACTAGGGGTGGGTTGAAAG # Left flank : ATAGAATACAATTATCAATAGCGCCACAGGTCATGTTCGTTTGAACCGCTGAGACTGTGATACGTTGTGAAACGTGCGGGTTAGTTTGACTGTCGGAAGACAGTTGTGCTTTCTGACCCTAGTAGTTGTCCGCCCGGATGCTGATATCTATGGTTCCGGCTATAGAAATGATTAACCTGTAAATTGAGGTTCACTGATACTTCAATTTTATGGGGTAGGTGCGCTCCCAGCAATAAGGGTGTGGGTTTCCTACAGTGACGGCTACTGAATCACCCTCGACCAAGGGGGAATCCACCTTAATTTTTTATTTTTCGTGAACCCAAGCAGGGGCAAAATTCCTGGGAGGTTTACGAAAACTGTCAATCCCTTATGGAATATTGATTCCAGTATTTCTGTGGGATGGTTGCTCCTGTAAATACAGGACAGATAAAGCGAAAATTTTAGAGGTTTACGAAAATCGCCTCTAAAAGCTTCTCCAGGTAACTGTTGTAGCAATCGCT # Right flank : AAAATAAGAAATAATAAAATAATTCTTAAGAATTATAGGTGGGTTGAAAGGTAAAACCTTAGCCTTCTTTACAGTGAGCTACTGGAAGTCAAAAGGCAACAATGTGTCAATGCGGTCAAATAATCGCTCTTCCCATCTTTTGGTGAAAAGGGCATAACCGTTGATCGGATATACGAGACTTTTAGAGTTCCAGAGTGTTCAAGAATACAGATCACCGAAACATGGGGAGATCCCAAATAATGTGGCAATCGACATGACACTAATTTGTTAAAGTGACATCAATTTGTTAATGTACAAACATTGAACGACAATTATTTTGTCAAAACGTCAAATAATTTGACAAGACGACATTAATTTGACAACGACGACAAATAATTAGTCAATCGACAACTCAAAAAGCGGGTAGCGAGAATCGAACTCGCATCATCAGCTTGGAAGGCTGAGGTTTTACCACTAAACTACACCCGCGAAAGATGTATGTTCCCATACTTAAACTAGAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACGACCATCCCAACTAGGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 1 17078-20769 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOM010000082.1 Trichocoleus sp. FACHB-832 contig82, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 17078 37 100.0 33 ..................................... TACCTCTTCCTGAGAGCGAATCTCGCAAACGGC 17148 37 97.3 34 A.................................... GGGGGTACGCACTGCATTAATGGGGCACAGGTGC 17219 37 100.0 35 ..................................... CTGACTCTGGACGCGAGTTTGCTGTTCAGATTGAG 17291 37 100.0 34 ..................................... CTCGACAAGCGCTGGGAGGATGAAGACAACACGG 17362 37 100.0 33 ..................................... CAAAATGAAGCACCGCGTCTTTCTTCATCCCCT 17432 37 100.0 36 ..................................... ATCATGCTTTCGATGATTCTAGGCTTAGACCCTGAG 17505 37 100.0 34 ..................................... CTACCAGTGCAGCAGGTAGATTAGTAGATTTGAC 17576 37 100.0 33 ..................................... TCGGGGACATATCATCTTCAATTTTCTGAATAA 17646 37 100.0 34 ..................................... ATCCAGACGGACGAGTCATTGCCGGATATTCGGT 17717 37 97.3 34 A.................................... AAGGCTGATACTTATGCTAAAGCTATTGATTTAA 17788 37 100.0 37 ..................................... ATAGGATAATATTTTTTAGACTTTTGTATCTCATCAC 17862 37 100.0 36 ..................................... TTCACGTACAACATATGCAGTTCGTATGGGATTATT 17935 37 100.0 35 ..................................... GCAGGCGGAAACGGATTGCCTTCAGAGTCAAACTC 18007 37 100.0 33 ..................................... GCCGTGCCCTGAGAACGGGCAAAAATGAATTGC 18077 37 100.0 35 ..................................... GGCACTCCCAACCATCCACTAACTAGGGGAGGTAC 18149 37 100.0 34 ..................................... AAAGATAAAGTCCAGTTACGAGTAGACATTAAAA 18220 37 100.0 35 ..................................... AACAAATTAGTAATTGGTGCTAAACACAATAAAAA 18292 37 100.0 36 ..................................... GTCCGTTCTCTTGTCAAATAATCAAAGCGCGCTAGC 18365 37 100.0 34 ..................................... TTAAAGGATTTAAATAATAATTGCAAACAAGTTT 18436 37 100.0 32 ..................................... AAAGGATGATTAGGCGTTCCTACCCATATCTT 18505 37 97.3 34 A.................................... CTGGGATCTGCTGAAACTGTGAGCGATCGCTAAC 18576 37 100.0 34 ..................................... TGCAAACTTCACTTTGGGGAATAGAGCGCGAGAT 18647 37 100.0 34 ..................................... AAGCCCGATTCATAACAAGATTGACAAACCGCAG 18718 37 100.0 33 ..................................... AAAAACAAATATTAAAACTGTAATCTTATATTC 18788 37 100.0 35 ..................................... GAAATCTACCCCATCACCCCAGAGGTGCCGCGAAC 18860 37 100.0 34 ..................................... CAGCCCACAGAAGGAATCGTTCTTCTGTGCGATC 18931 37 100.0 35 ..................................... TAACTTTTATAACTCGTTGGAAAAAAGAACAAGCC 19003 37 100.0 34 ..................................... AAAAGACTTTTTGGGGTGGAGTGTGTAGAACCAC 19074 37 100.0 32 ..................................... ATTTTTAAAACGTACTCTTCCCCCTCATTTAA 19143 37 97.3 34 A.................................... ACGCACCGCAATATCAACTTGCCCCTCCGATTGT 19214 37 100.0 35 ..................................... GCACCATTTACATTTTCCTCAAGGCAAAATTTTAA 19286 37 100.0 36 ..................................... GATAAAATTTCTGCTCATCCTGATTATCCAGTTCGC 19359 37 100.0 34 ..................................... AGGTTGCACACCGACTCAATAACCATCAAAAAAA 19430 37 100.0 34 ..................................... GACACCATGTCAACTTCTCAAGCTTACAATAATT 19501 37 100.0 34 ..................................... ATGGTTGATCGCACCCCCCCCGCCCCCTGGAAGG 19572 37 100.0 36 ..................................... AGTGAAATTACTTAAAAATGCTTGAATACAATGATA 19645 37 100.0 34 ..................................... ATTATCTCTAAGAGAATAAGTTTGAATAATTTTA 19716 37 100.0 34 ..................................... CACTGGACATATTTTAGTTTGTCCAGTGGACAAA 19787 37 100.0 39 ..................................... TCCTGTAAATTCCTACTGTGTAGTAGACAAGCCCAGTAG 19863 37 100.0 34 ..................................... AGTGGCATATAGAACTGGGAAGCCTTCGGGGAAA 19934 37 100.0 34 ..................................... AGAGACAAGTGCCAGCACCATTGACAGCAGCAGA 20005 37 100.0 32 ..................................... TAGATTCTTGATTGTAGGAGGTTGCCTGGCAT 20074 37 100.0 40 ..................................... ACTGCCATCGGATTTAGATAGAGGGGCTGGCGCTCCTGGT 20151 37 100.0 35 ..................................... AAGGATTCAGGGTGTGCAGACGGATGCTGAAAGTG 20223 37 100.0 35 ..................................... AATAGTATTCTGTAAGGCCATCGGTATTTAATTAA 20295 37 100.0 40 ..................................... CAGCGCAAAAGGCAGACCATAACAGCTAAACACGCGCGAT 20372 37 100.0 34 ..................................... TTAGCGCTGCTTTCCTTCCTCCGATTCTTTTGGA 20443 37 100.0 35 ..................................... ATAAGCAAAGGAACAGCACCAGCAATCAGGAGAGT 20515 37 100.0 35 ..................................... TGGTGGTGGAAGGGGACTAGCTTGAGCAACTACAT 20587 37 100.0 35 ..................................... TGATGCGGGAGGACTTCAGAAGCTGGGGCAGATTC 20659 37 100.0 33 ..................................... GGGCAATTACAGCAAACTGCTGTGGGGAATAAT 20729 37 83.8 0 ....................GG.CT..CC........ | TAAT [20746] ========== ====== ====== ====== ===================================== ======================================== ================== 52 37 99.5 35 GTCGGAAAACTCTATAATCCCTATCAGGGATTGAAAC # Left flank : TCTGAGGACAGTCGTCGCACCAAAATTCACAAGATTCTCAAATCTTATGGACAGTGGATGCAGTATTCTGTGTTTGAGTGCGACTTGACTACTACGCAGTATGCTAAATTGCGATCGCGTCTGGCGAAGATGATTAAGCCAGAGCAAGACAGCATTCGCTTTTATTTCCTCTGTGGTTGCTGTCAGCCGAAGATTGAGCGCATCGGCGGCGAAATGCCAATGGATACTACTGTGTTTTTTGCTTGATGCTTGCGTCAACCAGTAGGTGTTTTTTTGAGGGGTTCGATTTTTTTGGCTGAAACGTTTATCTCGTCTAGATTTGAATGCGATCGCTCCCTATCAGAGGTTGACGCAAGCCCTGTAACCTTTATGGGCAAAGAGTTTCAGAGCATTTTCAAGAATCACCATTTGACAAGTCGATTTCTGAAATGGTACATTGTCTCTAGATTTACGCAAACCAACCTTGAAAACTACATATATCAAGGCTTTCAGACCCCGGC # Right flank : CTTGATTTCAATTCACATCTGGCACTATTCTCAATAAGTTCCAAAGTCCGCCAGAGATTTTAAATAACTATCACCAAATATTTTAAAAGGCGCGATCGCATTCTCAGCTAATCGCACCTTCTGGACTATTCCACTGTCACCGATTTTGCCAAATTCCTTGGCTGATCCACATCCAAACCGCGACGCGCTGCAATGTGATAAGCCAATAACTGCAAGGGAATCACCGTCAAAATCGGCGAAAGCAACTCTTCCACAGCCGGAACAGGTAACAAATCGTCAAACGTTTCCGCCGCCTCCGGGTCATTCATCGGTGTCACACCAATCAAACGGGAATCCCGCGCCTTAGCTTCTTGGGCGTTCGAGAGAACCTTTTCGTACACATTACCCGGCATAGCGATCGCAACTACAGGAACCTTAGCATCCAGCAGCGCAATCGGCCCGTGCTTCATCTCTCCAGCCGGATAACCTTCCGCGTGGATATAGCTAATTTCCTTCAGTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAAACTCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : NA // Array 1 52803-59579 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOM010000074.1 Trichocoleus sp. FACHB-832 contig74, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 52803 37 100.0 34 ..................................... TTTTTTTGGGAATTTGTAAGTGGACATCATGGCT 52874 37 100.0 33 ..................................... GCACGAACCCTTATCAAGAACTGTTACCGAGCC 52944 37 100.0 34 ..................................... ATGGAAACCTAACCAGCCGAAACGATATGAAGAT 53015 37 100.0 32 ..................................... GCATCAGTAGCGCCTTCGGCGGGAATTGTAGC 53084 37 100.0 32 ..................................... TCCAGCCTCTGCACCACTGCCTGAAACATGGC 53153 37 100.0 35 ..................................... TTGTGCCTGAGCTTTCCAATCCTCCAGAAGCGCCA 53225 37 100.0 32 ..................................... TGCAAACTTCACTCTGGGGAATCGAGCGCGAA 53294 37 100.0 35 ..................................... ACTAACCTGATTAACTGATAAGTGATTTTTCCAAA 53366 37 100.0 35 ..................................... ATATCGCCTATGGGCGTGCCGGGAAACAGCGTCAA 53438 37 100.0 35 ..................................... AGATTTCTAACAGCAATATCTACTTGCCCCTCACT 53510 37 100.0 36 ..................................... GGATAGATTAAATCGAAAGGAAACCTAGTTTTTAAA 53583 37 100.0 35 ..................................... ATTAATTACCCTTTCTACGTAGCGTCATCGTCATT 53655 37 100.0 33 ..................................... ACTTATCCGCCGCTCCAGAATTAGCCAAAATCC 53725 37 100.0 34 ..................................... AAGAAAAGCCATCTGTATTTTGGGAAATCTTGGA 53796 37 100.0 36 ..................................... TTGGTTATTACCAAAACCAGAGGATTGATTAGTCAT 53869 37 100.0 39 ..................................... TCTCCCTGTCTATACCTCATCTATGTATTTATCTTTAGA 53945 37 100.0 35 ..................................... AGCTGATGGAGAGGAGAATGCGATCGCGCTGCCGT 54017 37 100.0 35 ..................................... TATTGCGACAGCGGGCCATTTTGATGGGCGCTTAA 54089 37 100.0 33 ..................................... ACTTAGTATTCAAGACAAGGATGAACTCCTAAA 54159 37 100.0 34 ..................................... ATGTCCTATTTGTCAATGGAGGCGCAGTATGCGC 54230 37 100.0 34 ..................................... AAAATTGTTCGTTTTGTTACCTCTGAAATAGGGC 54301 37 100.0 35 ..................................... GAAGTATATAAAATCTTCGATTGCTGCTAATTTTA 54373 37 100.0 37 ..................................... CCCCCGAAAGTGAAAAACGCCTTTGCATATATGATAA 54447 37 100.0 36 ..................................... TGCTTATACCTATGCTGAGGCTACTGAAAAAATCAC 54520 37 100.0 33 ..................................... TAGTTGCTCTCGACTTGCAACTGCGTTTTATCC 54590 37 100.0 34 ..................................... CTACAGAACATAGTTTTAGCTTGATTATAAGCAA 54661 37 100.0 34 ..................................... ATAAGAAAGAACGGCCCCACGCTTACCCATCTGC 54732 37 100.0 36 ..................................... TCTTTTTCTGTAAACCAGCCTCGTGGTACTTATGGA 54805 37 100.0 23 ..................................... TCGATGGGCTTGGCTTCTGTCTA Deletion [54865] 54865 37 100.0 35 ..................................... AATCAATTACTAAAAAGGCCAGCTTAATTGAAAAG 54937 37 100.0 34 ..................................... ATATCTAAATTCAAGAACGCGAATAAATCGCAGC 55008 37 100.0 37 ..................................... TTTGACAGCTAGGAGCATACAAGTGAAGGTCTACAAG 55082 37 100.0 33 ..................................... ATTAATATTTATTTACAATCGCTTCACCTAGGC 55152 37 100.0 33 ..................................... CTAGAATTTGCCGCTGTAAGGATGCGATCGCTT 55222 37 100.0 34 ..................................... CTAATGCCAATTGAAGTGTCAATTGGATTTTTAT 55293 37 100.0 37 ..................................... AAATATCCCTGCTATTATGAAGGGGAATTTAATTATC 55367 37 100.0 35 ..................................... GCTTGCTCATCCATTGAAGTAATCATCGCCCCATA 55439 37 100.0 33 ..................................... TGAGCAGGCGCAGGAAGCGCCCAGAAAGATACA 55509 37 100.0 41 ..................................... ATCAAATTATGATTCATTCTTCCTGGGGTGGTACTCCTCAT 55587 37 100.0 34 ..................................... GCAACTGAAGGCGCGGGAACGATTGGGAATTATA 55658 37 100.0 33 ..................................... GCGGATTAATCCAGCAAATGTAGAAACACTAGA 55728 37 100.0 35 ..................................... GCGAAATGGCAACATATATACTTGGAAAATACGAC 55800 37 100.0 33 ..................................... TATTTTTAGTAAACCTAGCCCGGATAAAACCAA 55870 37 100.0 35 ..................................... TTAGACGAGGTTACAAACACAAACAAAGTAATTGA 55942 37 100.0 34 ..................................... TTCCGTATTTATGCCATAATTTCATTAATCTCTT 56013 37 100.0 38 ..................................... GCGGAATGGCAACGGGCATATATTTTGGAAACTGCCGA 56088 37 100.0 34 ..................................... AAACATTAGGAGAGCCAAAAAGGTCAAATGGGAA 56159 37 100.0 33 ..................................... CACCACCAGAAGAATCATTTACTGCTTTCCAAT 56229 37 100.0 35 ..................................... TGAGAGATTTCTCTATCTCTCTCAAAATTCGCAAT 56301 37 100.0 33 ..................................... AAATTAATTCCTTTGCTTTTGAGTATCTGACCT 56371 37 100.0 35 ..................................... TTTGGAAAGCCCGGAAAACCCGGAAGGCTGAGGAA 56443 37 100.0 38 ..................................... TGGGATAAGCATAAGGCTTATGCAGAGCAGGTTTCAGA 56518 37 100.0 37 ..................................... TTTGTTATGGCTACTATAGCTTTAGTGATTAAAATAT 56592 37 100.0 33 ..................................... TGAGAGCAGAAAATTTCCTGAGTTTTATGTTAA 56662 37 100.0 34 ..................................... ATGAGCAGGGGAGCTGAGCCAGCAATCAACAAAG 56733 37 100.0 36 ..................................... ATTATCGCGTAATAGTTCCCCTTTCGCACGCTTTGA 56806 37 100.0 37 ..................................... CTCCCCCTCCCCCCAATCCGGAGCCGGAAGACCCCAA 56880 37 100.0 36 ..................................... AAACGAGTTTCTAAAAAGCGGAAAAAATAAAGTTTT 56953 37 100.0 34 ..................................... CTTATACTTCCCTTTAGCTTCCTTTCCTACCGCT 57024 37 100.0 37 ..................................... AATTTAGGCTTAGGCATCTGTATTTCTCCATTCTAAT 57098 37 100.0 34 ..................................... AGAGAGAAAGGTGGCAGAATCACCAGATATTCGA 57169 37 100.0 37 ..................................... TCAAGCATCGCAAGCGGCTCAAACGGAAGCACAGAAA 57243 37 100.0 38 ..................................... AGGAAGTTATGGTTTGCTTGATTGCTACGACCTGGTTT 57318 37 100.0 33 ..................................... TCTGCCCCGTCTGCCAGTGGAGGAAACGTTTGA 57388 37 100.0 35 ..................................... ACTCGTGAAAAAGGTAATTCAGATTATGCACATCC 57460 37 100.0 35 ..................................... TTATTCAAACCCGCATTGCCAATATTGGGAGCAGA 57532 37 100.0 35 ..................................... AAATTGTATTGCATACTCCGGCATTGCACAGTAGA 57604 37 100.0 34 ..................................... ATCTAATTGTGTATTACATAGAGAAGTACACAGT 57675 37 100.0 33 ..................................... CTTTCATCAGCTCTCTTGCTTGATCACTGTTTT 57745 37 100.0 34 ..................................... CAAATAAAATATTTAACTCAGGAATTGCTATTTT 57816 37 100.0 33 ..................................... TTACAGGTACAGCATAGAGAATGTATATGTAGA 57886 37 100.0 36 ..................................... TATGATAAGCGCTTGGAAAGTGAGGGGGAAACAAAA 57959 37 100.0 34 ..................................... ATTTTAGAGCGATTGCTTTTCTTACACTTGCCCA 58030 37 100.0 34 ..................................... AGTTATCTTACTGGATTTATAAGTCAATTTTCCT 58101 37 100.0 37 ..................................... TTACTTTGACAATCTGACTCTACAGGATGTCTTGAAA 58175 37 100.0 35 ..................................... GAAACCTCTACATACATCTGGATTGAGTAAAATAT 58247 37 100.0 35 ..................................... ATCGGTGCTAGTTGACTCCGGTTCATGGCTTGAAA 58319 37 100.0 34 ..................................... GACCAAATTAAAGCTGAGGCTGAGGCTCAGAAGA 58390 37 100.0 36 ..................................... ATAATAATAATCCCGTCTTGCATTACTCTGCTCTAA 58463 37 100.0 35 ..................................... CAAGCTTTGAATCAGCTTTAAAGCCTGTTCCTGGC 58535 37 94.6 35 .........C..T........................ CAAAACGTCATCATTTTGTAGCTAGACCCTCAGAA 58607 37 94.6 33 .........C..T........................ CACATAAACCGCAGCAACCGCCACGCCCGTCGC 58677 37 94.6 34 .........C..T........................ TGGAGAATTGGAAGCTAGTATTGTAGAAATGTAA 58748 37 94.6 35 .........C..T........................ AATTGATTTGTAAATTGCATCCTCAAGTTTACTCA 58820 37 94.6 34 .........C..T........................ GCCAAGGTTGGCGTACTTCGCCATGATTTCAAAG 58891 37 94.6 36 .........C..T........................ CCCTCAGTTCCGGGTAAGTAAATCACATTTGTTAAA 58964 37 94.6 34 .........C..T........................ GCGATACCACAGTCCTTCGCCCCACCAAAATTTT 59035 37 94.6 33 .........C..T........................ AAGATTGACCGTAGCTGGAAGGGATGCTCCCTA 59105 37 94.6 33 .........C..T........................ TCCGAGGATGGTCTGTGGCTCAGCAATGAATCT 59175 37 94.6 34 .........C..T........................ ACTTGACAAACATAAAGCCTCTCAGCTATCTTGG 59246 37 94.6 36 .........C..T........................ TTTTGGTCAACTTTAGACTTCCACATTCCCCCTAAA 59319 37 94.6 36 .........C..T........................ ATTCATAAAAAGCAAGCGCCCAAAAAATCCGGGGTT 59392 37 94.6 38 .........C..T........................ TCAGTCATGACTAAAGAATTAATGAAAGGATTAATGAA 59467 37 94.6 36 .........C..T........................ GGCACCGGACGCTACGCACCAACCAACGCCCAAACA 59540 37 75.7 0 .........C..TC.................GTCCTA | A,TT [59565,59568] ========== ====== ====== ====== ===================================== ========================================= ================== 95 37 98.9 35 GCCGGAAAAGTCCTAAATCCCTATCAGGGATTGAAAC # Left flank : AAGAGTTCCAGGGAGTCAAGGGAACCCTAAGTATAGGCGATCGCGTAATCAAGTTGACTGATGCCAAGTTAACAGGTGATCGTCTCAGCTTCAAGACCGTCGAGTCGGTGAATGGAACTGAGGTAACGATGCAGTTTGATGGGAAAATTCAGGAGGATGCGATCGCTGGTAGTGTCAATTTGGGTGGCAATGAAGCACAGCGCCGCGATTGGGTAGCCAAGCGTCAATCATAGAGGCGATTTTTAGTTCAATGCGTCAACCTGTAGGTGTTAAAATTCACCAAAGCTAAAAAATGGCTGAATCCTTCTGTGTGTAAGGATTTAACTGATGCAATCTAATTGTACGGTTGGCGCATCTGCTGTATTGCTCTCGTACCGAGCTTTTCAGACGTTTTCACTAAATGAGACTCTTGCCTAATCCGCGCCAGGATGATAATATTCCAGAGGTTGACGCAATTGCACCTCGAAAACTACATACAGTAAGCCTTTCAGATATCGGCA # Right flank : AGCGATCGCTCACATCAACTATCTGGGTCTTGATAAAATTCTTGTAGCGCTTGCTGTTGAGTGCGACGGGAAGGACGACGATATTTTTTAGTGTTCAGCCTGGGTTCGTATTGGTTTTGCCCTTTGCCCTTGGTTTTCTCCTTCATAGCGGCATCAGGATCGGATTGTTGGTGGAGATGTTCGCTGCGAGCGATCGCATCTTCCAAAAAATCTAGATAATGCTCGTAACGCTCCCAATCTCCACTAACTGCACAATTCGGCTCATCGCGATGCAGACAGTCGCTAAATTGACATCTTCCCACTTCTAGCCGCTTCTGCGCTTCGGGAAAATATTGGACTAACTCCTCTGGCAGACAGTCCAAGTCTGGCTGATTGAAGCCTGGAGTATCTGCCAGCAGTCCACCTGTCGGCAGTTCAAACAGTTCTACGTGTCGCGTCGTGTGACGACCCCGGCTGAGTTTCCCAGAAACTTCCGCCACTCTCAAATTGACATCTTCAAT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGGAAAAGTCCTAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 2283-2537 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOM010000119.1 Trichocoleus sp. FACHB-832 contig119, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 2283 37 100.0 35 ..................................... CTAGTCAAGGTTGTAGAAGGCTCGGAGCCAGTTAT 2355 37 100.0 36 ..................................... ATTCCCTCCGTTTCTTGGGCAGATGTCGATAGTTTT 2428 37 100.0 36 ..................................... GAGTCCCTCTTTAGAGGGCGCTTGCTTTTGGATATG 2501 37 91.9 0 .......T........................A...T | ========== ====== ====== ====== ===================================== ==================================== ================== 4 37 98.0 36 GTTTCATCAACCCTCCCGCCTTGGGGTGGGTTGAAAG # Left flank : GGGTTTGTTTGACTGTCGGAAGACAGTCCTACTTTCTGAACCCTGGTAGCTACCCGCCCATGATGCTGCCCCTATGAATACCTTCTTCATAGGTCGGGAAATTCCCGTGTATGAATACTGGAGTATATAGTATACAGGAAAGGTGCGCTCCCAGCAAAATGAGGTGAGGCTGAGGGAGAAGGTAAATTTTCCCAAAGCCCTAGCCCTTGTTAACAAAGGTGCAGATTACTCATCCTTGTTAATAAGGGTGCGGATTACCGCAGTGGTGGCTCCGAACTCGTCCCCTTCGGGGGAGCCCTCCCTAATTTTTTTTTGACGGCTGAAAGTGGGATCAAGATCCCTGAGTAGCCGTCAGACGTTTAAAACTCTTGTCCCGTCTTGATTTTAGATGTTCACGGCAGTAATCTTTCTCCTTGGGAAAGAGCTGAAATGACCAATTTAAAATCAGCCGACAAAAATGTATTTGTCAGCTTGTTTAGACAAGGGTTTCAGCGGGCGCG # Right flank : TGTTATAGAGTTGCGCCAGCAATTTGAATACTAATTGTAGAGAGTGTCAAAAATTTCAGGAGGGGGTTGAAAGGAGCGCCTGCCTTACAATTAATTTCGCGTGACTACATCTTGACGACATTAATTTGTTAACGGTTGTCGGCACTAATTTAAGGACACGAATTTGTTAAGAACGACGCTAAGCGACATTAATCTGTTAACAGCGACATTAATCTGTTAACGACGACAAATAATGTGTTAATCGACAAAATCAATGGGCGGTACTGGATTTGAACCAGTGGCCACCTGCTTGTAAGGCAGGCGCTCTACCGCTGAGCTAACCGCCCAATTTCACACAATAAAATCAATAATAGCAGATGTTTTCTGAAAAGTGTATAGTTTGCAAAAAGAAGAAATTTACACCTGATGCCTTCTGGTGCAACGCACGATCGCATAACTCTATGGTGCTTGCCAATGGTGGCGGGCGCGACGTTGGGGTTGACTCGCAGTAGCAATCTGAC # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATCAACCCTCCCGCCTTGGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.50,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 22204-23677 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOM010000033.1 Trichocoleus sp. FACHB-832 contig33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 22204 37 100.0 36 ..................................... TTGATACGGGCATTAATGACGACGACGCTACATAGA 22277 37 100.0 33 ..................................... AGGGCTGGAATCCTTTACCCGCAACTTTCTTAC 22347 37 100.0 36 ..................................... TTCGAGGCTATTGCCCAGTTTGAAAGAGATACTGAA 22420 37 100.0 33 ..................................... TTTTCGCTTGCTTGATTTCCCCTTCTGCTATGC 22490 37 100.0 35 ..................................... GCGATCGCCGCTCAAGCAGCCGCGCAGGTTCTTGC 22562 37 100.0 32 ..................................... TTAATGAATCATCTGGTGGCGAACATTTGAGA 22631 37 100.0 34 ..................................... GGAATCGGCAACCAAATCAGACTCTTTTGTTTGA 22702 37 100.0 35 ..................................... GATAGAGGATTGCAAACTCAACAGAAGTAATTCGC 22774 37 100.0 34 ..................................... TTGCCAACAACTCCGTAATAGCCCATCTTATTTT 22845 37 100.0 33 ..................................... TATAAACCAGCTCCTCGTAAAAAATAGATGGGA 22915 37 100.0 34 ..................................... AAACCTATGTAGATGGGCGATTTATTCACGCTAC 22986 37 100.0 37 ..................................... TTGAAATAAGAAGGATTAACCATCAAAAGAACATGAA 23060 37 100.0 36 ..................................... ACAAAATCAAGAGCTGACTCAGCTCCACAAGATAAA 23133 37 100.0 35 ..................................... ACAGAATATTTTATCGCTAATACTTTTTGAAGTTC 23205 37 100.0 32 ..................................... TACGGGAACATCTTCGTGAGCTGGAAGATGAA 23274 37 100.0 33 ..................................... CAAAACGAATAAAACGAAATTGAAATCTAAAAG 23344 37 100.0 38 ..................................... GTATCATTAATTCAAAGTTTTTTATGTGAGATTACTGA 23419 37 100.0 36 ..................................... TATATTATGGCTGTTTCGACTGGCGGACGTGGAAAG 23492 37 100.0 34 ..................................... TTAATTCATCTAAAGGGCAATTCTTAAGAGTTAA 23563 37 100.0 40 ..................................... TGGATTTTTGATTCTAAGGATTATCAAGAAGATGATGAAG 23640 36 81.1 0 ..............-.T....G.C.C.C...G..... | T,T [23659,23666] ========== ====== ====== ====== ===================================== ======================================== ================== 21 37 99.1 35 GCCGGAAAACCTCTAAATCCCTATCAGGGATTGAAAC # Left flank : GTTTGGAATACTACCAAAGTTTTGCCCCAAGACAAGTTTCCTGGGCTGCTGCTTAATGCTTTGTTTGGTTATACAGATAGACTTTATCGGGTGCAAGCGATCGCTTATGTTCTATTTTTAGTCAGCATCGGTGGCATTTATTTGAACAGTTTAAAAGGTCGCCCCCAGGTGGCAGCAGCCAAGGATAAATCAGTCCAAAACACAATCAGTTCCGGACAGGAATAAACTGTTGGTTTTTTGTTCACCGCTTGCGTCAACCTATAGGTGTTTTTTTGAAAAAGTCAATTTTTGCGGCTCAAACGCTTATCCCGTTTGGATTTGAGCAAGATGACACCATTCCAGGGATTACTGCAAACGCTGTAATCCATACTTTGCCTTGCTTTGAGGCGGTTTATAAAAATGCAATCTTGACAACCCGGTGCTTGAAACAGTACATTCACTTTAGGTTGACGTAAACGAACCTCGAAAACTCCATATATCAATGTTTCCAGAACCCGGCA # Right flank : CGATAGGGATGCTCATCCGGTAGCGTGTAAAATTAGCAATCGGAAATTTTAGGAATCAGTGCCAACATCTTCTCAAATTCCCAAAATGAAGGTAAGTTGACATTGCGGGGGATGGGATGAGACTTTGGCATGAATGCAAATCAAGATTTAATCAGAGCAGCTAAAAAGGGCGACATCAAACGGATACAAGCATTACTCCACCAAGGCGCTGATGTTAATACTACCGATAGAGAAGGCACCACTGCTTTAATGTTTGCCGCCCAAAACGGCAACACTGAAATCGTGCGGGTGTTGCTAGACAAAGGCGCTAATATCAACCTTGCCAGAAAACAGTATGGTCTGACAACCTTGATGTTAGCAGCGGCGGCAAATCAGGTTGACGTGGTGCAAGCTTTGGTGGCTAGGGGCGCTGACGCGAACGCCAAAAACGAAGATGGAAGTACGGCGCTGATGGTAGCGGCGTTCAAGGGTCATGCTTCCGTGGTGCAAATTTTGCTAGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGGAAAACCTCTAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //