Array 1 2325116-2323692 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_018641.1 Lacticaseibacillus paracasei, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	====================================	================================	==================
   2325115	    36	 100.0	    30	....................................	TGTTTTCTCCAGAACAACAGCTTAGACGGC  	
   2325049	    36	 100.0	    30	....................................	TGACATTGTGGGTATGCAACAAATCACCCC  	
   2324983	    36	 100.0	    30	....................................	GAAACTTGACAAAAACAATCTTATCTACTG  	
   2324917	    36	 100.0	    30	....................................	GAATATCATAATGCGGACGACCCATTACCA  	
   2324851	    36	 100.0	    28	....................................	AAAAGCGTGCAATATGCACCGGCTCACT    	
   2324787	    36	 100.0	    31	....................................	GGATACGTGATGAACGCACTACAGTTGACCG 	G [2324766]
   2324719	    36	 100.0	    32	....................................	GATTCGCGGACACGATTGTAAACGAAGAAACC	
   2324651	    36	 100.0	    30	....................................	CCAAATTGGTTAGCACCGCTTAAAGACGAA  	
   2324585	    36	 100.0	    30	....................................	TATCAGAGGCTTATCCATTAAACAACTGGC  	
   2324519	    36	 100.0	    30	....................................	AAACTGCCTTCCGTTGCGATCAACTCGCGC  	
   2324453	    36	 100.0	    30	....................................	AAGCGTTCGCTTGCGCTGGTGTTGGTCTCG  	
   2324387	    36	 100.0	    30	....................................	TCGTAGCGGCTAACACGCTTATGGCTGACA  	
   2324321	    36	 100.0	    30	....................................	AAAATATTTCTAGAATTAGCAACTTTATGG  	
   2324255	    36	 100.0	    30	....................................	GATCGTTGAAGAAAGGCTGATCAATATGTT  	
   2324189	    36	 100.0	    30	....................................	CGCAAAAAATGTTTTGACAAGAACACATCG  	
   2324123	    36	 100.0	    30	....................................	GGCCAATATCATCAGTCGGGAGATTGTCGC  	
   2324057	    36	 100.0	    30	....................................	ACTCGTCAATATCCTTCTGCATGATCAAGT  	
   2323991	    36	 100.0	    30	....................................	GCAATCGCGATACTTTCACCGATTGCAACA  	
   2323925	    36	 100.0	    30	....................................	AACAAAATAATAGGAGGTTTTTACCATGGA  	
   2323859	    36	 100.0	    30	....................................	ATGACTTTAACAATCAAATCCCAAGTTGTT  	
   2323793	    36	 100.0	    30	....................................	TATTATCCTAACACATCCATCGAGAAGTTA  	
   2323727	    36	 100.0	     0	....................................	|                               	
==========	======	======	======	====================================	================================	==================
        22	    36	 100.0	    30	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                                	       

# Left flank :   AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTTAGTCATTATTTAAGTGCCAGAGACTTTTCGTCGGTGACTGAACAGATCGGTGATACTGAACTTCAAGTCGTTCTCATCGAATTCTCAAAGGTGAACAGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGACAATCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACAG
# Right flank :  TGAATATTCTAATGTTGTTGGATTGAAGTCAATATTTGAGACAGATTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATCAATTGCGATTAATAACTTATTTGAACCCTGGAAAGCATTAAGTCAGGCGGCCATTTGGCTCGTAAGTGTTGCAATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACGGCAGCGGCAGTTTCATAATCTTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGGAAGCGTGAAAGGATTCCATTGGCGCATTATCATACGGACAACCCTTACGGCTGTATGAGTGGCGGATATGTAGTTCAGTTAAACGTTGATTGTAATCATCGCTGGTATACTGTGATCCTAAATCCGTATGGATAATCAGGTCCCCAGTAATGGTTCGATTTTTAACCGCGCTTTCAAGGGT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-19] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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