Array 1 912410-916470 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044224.1 Mycoplasma gallisepticum strain 6/85 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 912410 36 100.0 30 .................................... ACAGCAAGCGCTTATCTTGGTTGATCAAGC 912476 36 100.0 30 .................................... ATTCCCATTATTTCAACCGCACTAGTAGCG 912542 36 100.0 30 .................................... TTAATATTTTTGTATTTAAATCAAATTTTT 912608 36 100.0 30 .................................... AACGATGTTCTTGTTGTTTAGGTGGGCAGA 912674 36 100.0 30 .................................... TAGTTTGTAATTAACTTCTCTATTTTCTTC 912740 36 100.0 30 .................................... TTTTATAATTAATATATAAAAATAGGAGTT 912806 36 100.0 30 .................................... ATTAATTCTTCTGACTTTCAAACTCATCGT 912872 36 100.0 30 .................................... TTAAAAGATTTAAAAGTAATTTCTCACCAC 912938 36 100.0 30 .................................... ACTATTAAACGTTAAAGACATTAACAACAT 913004 36 100.0 30 .................................... ATGTACTGATAATAAGTGTTTGTATAAATT 913070 36 100.0 30 .................................... TGGGTTTACAAGCTTTAATCCTAACATAAA 913136 36 100.0 30 .................................... CTGAAAACCATAAAACCGACTTAACTTGAC 913202 36 100.0 30 .................................... ATTCACTACATTATCACAAACCTAACGTTG 913268 36 100.0 30 .................................... ATAATTAAATTTGTCTGTAAATATAAAGAC 913334 36 100.0 30 .................................... AAGTTACCACACAACAACATCACCTACCTC 913400 36 100.0 30 .................................... ATAAAGTCATTAACTCTATCATTATTTTGT 913466 36 100.0 30 .................................... GTCTATACAACTTAGTTTATGATGTTTATG 913532 36 100.0 30 .................................... TTTAATGATGGTTATGATGTTTTTATTCGT 913598 36 100.0 30 .................................... TAAACCCCAAAAACAGCTTCTAATTTTACC 913664 36 100.0 30 .................................... TAAAAACAAAAAATGAGCTGACTTTGAACA 913730 36 100.0 30 .................................... CTTTTTTAACGTTTTGAGATAATTCATCGT 913796 36 100.0 30 .................................... TCTACAAATTGTCAACATATACCGACCCAA 913862 36 100.0 30 .................................... ATCACAACACGATTGATCATGGTATAATCG 913928 36 100.0 30 .................................... AAATTTTTTAATTTTGTCAATAATTTTTGT 913994 36 100.0 30 .................................... AAACGACAAAGTGAGTCTCTACTTGATGAA 914060 36 100.0 30 .................................... CTATTTTTATATTAATTATAAAACATATTT 914126 36 100.0 30 .................................... ATCTGCGGGCTTAACATAACCCATTGTTAT 914192 36 100.0 30 .................................... AACCTTCTTTTTTCGTCGTTTAATAAATAT 914258 36 100.0 30 .................................... TTCGAACTTTCGAATTAAGTCGTTTTGGTT 914324 36 100.0 30 .................................... GTTGTCATGATAGCCTTTAACGCCTATATA 914390 36 100.0 30 .................................... CTATTAGTCTAAGACATTTAGTCGCATCAT 914456 36 100.0 30 .................................... ACCAAAAACAAAGTCGTTTTCACGTTTTAT 914522 36 100.0 30 .................................... AAATTATTGACAAAATCAAAATACTTTGTT 914588 36 100.0 30 .................................... CTTAATAATGCCTACAAAATATTTATATTC 914654 36 100.0 30 .................................... AATGAGTTGATCAGTGATCGCTGATTCTGA 914720 36 100.0 30 .................................... TTGCAATGAGTTGATCAGTGATCGCTGATT 914786 36 100.0 30 .................................... TGAATTTAATGTTCTTAGTCTCTTTAATAT 914852 36 100.0 30 .................................... TTTAAAAGTTGAAAATTATACGATTAAACA 914918 36 100.0 30 .................................... ATTTTCTTCTCCTTGATTATTCTCTAACAC 914984 36 100.0 30 .................................... TTTGGATAAATTCGAATAATATCTTTATCA 915050 36 100.0 30 .................................... TTTAAAAGTTAAAAACGTTGTCGTTGATGG 915116 36 100.0 30 .................................... TGATCACCTTCAACTTTAAACCCAAAATTT 915182 36 100.0 30 .................................... TTAGTTTAAATAGTGCAACTGACCCACTTT 915248 36 100.0 30 .................................... TTAAATTATCACCATCATAAGCATCTATGT 915314 36 100.0 30 .................................... GGGGTCGTGATAGCCTTTAATGCCAAGATA 915380 36 100.0 30 .................................... CAAAAATTAAATTTAATGTTCTTAATGTCT 915446 36 100.0 30 .................................... AAATTTAAAATTACCAGTTGAATTTTCAAA 915512 36 100.0 30 .................................... TATTGATCTCTTCCATTAAATCGTTATTAT 915578 36 100.0 30 .................................... TTTGTTATGTAATTGTAATAACTGTTCGTA 915644 36 100.0 30 .................................... AAAGTTAGTTTTTGCGACGGTCAAAACTTT 915710 36 100.0 30 .................................... TTGATGTAGCTATTTATGTCATATAAATAA 915776 36 100.0 30 .................................... TTAAAGTAATAACAGATCAGATTGACATAT 915842 36 100.0 30 .................................... TCTTAATCAATGAACCCGCACCATATTTTA 915908 36 100.0 30 .................................... GTAGTTCGTTAAATTTACCAACCGGAATTA 915974 36 100.0 30 .................................... AAATGAACGTTTAACATTAATAATATTGTT 916040 36 100.0 30 .................................... AATCAAAACATCGACGTTAACGCTATCCGT 916106 36 100.0 30 .................................... AAAATTCTAATTAACATTCATCCAGGTTCT 916172 36 100.0 30 .................................... TTGAACAAATAACACAAACCCAGCTTTATA 916238 36 100.0 30 .................................... TGTCGCTATACCCAAACCCAAGTTTTTCCA 916304 36 100.0 30 .................................... TTAACTTTAGTTTTTCTGAATTTAGTCTAT 916370 36 97.2 29 ............C....................... ATAAACTGCAATTTTTTCTCGATGAACCA 916435 36 97.2 0 .............G...................... | ========== ====== ====== ====== ==================================== ============================== ================== 62 36 99.9 30 GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Left flank : TTGATAAAGAAGTTGTTGCTAAACTTAATGAAACGTTAGGTCGTGATATTATTTCGTTAGATACTTCTTACTCTAAGATTCTGAAATCAATAATAAAGATTTCAGAAGACTATATAGATCATGAATTTATCTATTCATATTTAGAATTATTACATTGATCAAAAGAAGTTAAAACAGTTATTCTTAAAGACTTTGATAATATCGATCTAAAAAGGTTAAGTAACTTAACTCAAACTACTAATTTAATTATTATGAAGAATGATATTATCTATGATCTTGAAAAAAATTTTGAGTTTTTTGAGACATACTGTTTAATTGATCATGATTATGAAAATATGATTAAGATTGATAATATGCCTTCTTTTGAATATTTATTAGAAGATATTTTTAAAGTTATGGTTGATGATGAGTTTAAGACCACAATGTCTTTTCAACAGCTAGAAATAGTAAAAAAGGAATTAAAAAAGCATATTAATTAGCTTATTTTACTTGACAATGAG # Right flank : CAAAAACAAGTATTTTTTATAAACGAAAAAGTTTTATCATTAAACATATTTAATCTGAAACAAAATTTTGAAATAAATAAACTATTACTTAATCTTTTGTTTCATATTAAACAACATAATTCCAGTTGCTACTGAGACGTTTAAGGACTGTATCTTATCAGTATACATCGGGATCTTGATCTGGTAATCAGCATTCTTAATTAGTTGACTCGAAACTCCCTTTTGTTCGTTCCCAACAATTAAGATTGATTTATTAGCATAATCAACATTATAATCTTGAGCTTGATCACTTAAATTAGACACATAAGATCAAAAGCCATACTTTTCTTGTAAATCTTTGATGGCATAAGATAAGTTGGCAACCTCAATTAAATTAAGATAAAAACATGCACCTAGTGATGTTTTTATCACTGTGTTGTTAATACTTACTTGGTTGTCTTTTTTAAAGATGACCCCAAGCACATTTGCTGCCAAACAACTCCGTAAGATTCCACCAAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //