Array 1 1018244-1018394 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJKLL010000001.1 Streptomyces sp. MNU89 tig00000001_pilon_pilon_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1018244 29 100.0 32 ............................. TCACCAGGCAGCTGGAATCCCGTGTCGATCCG 1018305 29 100.0 32 ............................. GGAGTGCTTTGAAGGCGCCGTCGTGTCGCCGT 1018366 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 CTGCTCCCCGCGCACGCGGGGATGGCCCC # Left flank : ATCGCGGTGCGGGTACCCCTCGATGTCGCCACCGAGTGGCTGGAGGAGAACCGGTTGCGACTCAGCCGGGTCAGGGCAGCGGTCGTGCAGGGGGACTCGGAGCAGCCAACGATTCGTGTGGCGGGCAAAGATGTCAGGGTGCCACCGGAAATGGCGAGAAGAATCAACTCTCCTGACGGCTGGGGCGACCTCAGCGAAGCCGAATTGGCGGAGGTCGGGATCGGTCCGGGGATGTCCGAGCCCGGGGACGACTCCGGGTCCGCACCGATGCGGGCGGTGCAGCAAGACCGGTGAACCGGCGCGGCGGCCAGCCGGGCGGCCAGGGGCGACCCGTCAGGGCGGGGCGGGTGCCGGGCGGACAAGTGGAAGAATGCTGCAGGGGTTGCAGAAGCCTATGAAAGATATAGACGCCTACTACGCCCGTTACACCGCTTTCGCGAAGATCGGTGAAAGTAAGTAAAAACAGCGTCCCTCGCCAGTAAACCCGCAGGTCGCGAACT # Right flank : CGCCCTGGTGGCGCGTGGTGCGGCCTGTGCAGGACCGCCTGCCGACCGATCAACAAGCCCCACATACCGTCGAGGCTTTCAGCCTCCGATCGGTCAGTGAGCCCGAAATGGAAAAGAGAGCAACTCCCCTGAAGGCTGGGCAATCTCGAGCGAAGCTGAGGTGGGCGGAGGGTTGGGATCATTCGGGGATGTAGAACCCGGAGACGCCTCTGAAACCGCGCCGATACTCGCGCCGAAGCAGCTGACTGCACGAAAGTACGCGCCACGGAGATTCCTGCTCGAGGAAGACGGTTTCTGCGAAAGTGACCGTATTCAGCTGCGGTCGTACAGAAGGAACTGTTCCCACGATCCGCTAATGCTGGTGGAACGGGCCCTCAACGCGTACTGGAGTGTGCCGGTGTAGTTGTGTTCCATCGTGACGTACAGGCCGTTCAGCTTGGACCGGATCGCCCAGTGGTCGAGCTCTTCGTTGTACAGCAACTCGAACCGTTCCCAGCCAC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1022373-1023006 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJKLL010000001.1 Streptomyces sp. MNU89 tig00000001_pilon_pilon_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1022373 29 100.0 32 ............................. GGCTTGTGGCCACACCTCTGTGCGACCATGCC 1022434 29 100.0 32 ............................. AGGAGGACGACATGCCCACGCAGAAGGAGCTG 1022495 29 100.0 32 ............................. GTGCAGATCACCAAACCAGCAGACGAGAGCGA 1022556 29 100.0 32 ............................. TGGAGCTGGCCGGTCACGACGCGCCTCCGGCC 1022617 29 100.0 32 ............................. GCATCGCCCGCATCGCGGACGCCCGCCGACGC 1022678 29 100.0 32 ............................. TCTGGTGCCGACGTCGCGAAGTGGATCGTCAA 1022739 29 100.0 32 ............................. CGGCTCGGAGGAATCCACCGGAACGGGCCTGC 1022800 29 100.0 32 ............................. TCACCGCCCACGCCTTCCTCACCCTCGAACAA 1022861 29 100.0 27 ............................. AGCCACGTCGCGGACTGCTCCGACATG 1022917 29 75.9 32 G.CGG......A.C..........T.... CGGTCGGCGGTGCACAGCATGCCTTTGTCGAG 1022978 29 75.9 0 G.CGG......A.T..........T.... | ========== ====== ====== ====== ============================= ================================ ================== 11 29 95.6 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : TATCCACTGGGTCAACCGCGATCGGGTACAACGGCGGACCGAATACGGCCTTCCGCTGCATGAGTTGCCGCGTCTGCCCGTCGAACGCCGAGGCGAGGCAGACCCGTGAACCGGCGCGGCGGCCGGGCATGCGGGCTGGTCCTGGACTACGCCGCCACGGAGGGTGATTCGCCGACGACCGGTAGGGGTCCCGCCCACCCGGTGCTGGAGCTCTGCCGGCGGGCCGGGACCGTCCATCCTGGCCGTCAGCAAGATCCCGCGCGAATCGGCGGAGCGCGTGAAGCGCCCACGGCTCGCCGACGGCGGAGACAGACGGCGGGCGGTCAGGGGTGGTATCAGGACGTGGCCGGTGCCGGGGTGGACGGGTGGAAGAATGCTGCGAGGGGTGCGAAGCCTATGAAAGAACAGACGCGCGCTATGCCCGTTTCACCGCATTCGCGCAGATCGGCGAAAGTAAGTAAAACAGCGTCCCTCGCCAGTAAACCCGCAGGTCGCGAACT # Right flank : CTCCCGCTCACCGATCTTCAGGCACCGCCGCGAATAAGCAATGGCCCTGACCCGGGTCCCCTCGGCGTCAGGGCCATGAAGGCGGACGGGTCGGCTTTGTACACCGGGTTCAGAGTGTGACGACCGCCGTCACCATCAGCGTCTCGCCCCCCCATCAGCGCCGATCCGGCTTCCCATGTTTTGCGGCTCCTGCCGGGGACTCGAACCTGCGGCCAAACGTCGACGTCTACCGGTTCAGCCGCACAATCATCTGGATCAACAGCTGCCGCCCACGCCGGGGAACGGCTGGTCGAAGCCAACGAAAGATGAGCCTGACCCGGATATAAGCCAGTTCGGGGCAGCGTCAGCGGACGAGTCGGTCTGTACGCCGGGTATGAGACGGCCGCTGTCACCATCAGCGGCCGCAGGACGCCATGAAGTTCACCGCGCAGCGCACCCAAACCACCTCTGGAAGGCCGGAACGGTGGAGCTTGGTAGAGCGCTGAACTGCCCTGTGCGGC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //