Array 1 3113602-3112307 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP048071.1 Mycobacterium tuberculosis strain RW-TB008 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                            	Insertion/Deletion
==========	======	======	======	====================================	===========================================	==================
   3113601	    36	 100.0	    41	....................................	CATAGAGGGTCGCCGGCTCTGGATCACGCTCCCCTAGTCGT  	
   3113524	    36	 100.0	    36	....................................	TTTTTGCCTCATGCTTGGGCGACAGCTTTTGACCAA       	
   3113452	    36	 100.0	    34	....................................	TCGCAAGCGCCGTGCTTCCAGTGATCGCCTTCTA         	
   3113382	    36	 100.0	    37	....................................	TCGCGGCGCGGCATGGCACGGCAGGCGTGGCTAGGGG      	
   3113309	    36	 100.0	    39	....................................	ACATCCCACGCGTTACCGCTGGCGCGCATCATTCATCGA    	
   3113234	    36	 100.0	    39	....................................	CCATATCGGGGACGGCGACGCTGCGAGAGGACACGCCGA    	
   3113159	    36	 100.0	    37	....................................	TACACCACGCGTCGTGCCATCAGTCAGCGTCCTCCTC      	
   3113086	    36	 100.0	    38	....................................	TTGAACACGGAGCCGTGCACATGCCGTGGCTCAGGGGT     	
   3113012	    36	 100.0	    39	....................................	AACACCTCAGTAGCACGTCATACGCCGACCAATCATCAG    	
   3112937	    36	 100.0	    35	....................................	TTTTCTGACCACTTGTGCGGGATTAGCGGGCTTAG        	
   3112866	    36	 100.0	    38	....................................	CTTTGCGAAGTCACCTCGCCCACACCGTCGAAGCGCCT     	
   3112792	    36	 100.0	    38	....................................	GCGGATGGTGGGCAAGTTGGCGCTGGGGTCTGAGTCAA     	
   3112718	    36	 100.0	    41	....................................	CTGCATCCGGAAAGTCCGTACGCTCGAAACGCTTCCAACGT  	
   3112641	    36	 100.0	    43	....................................	TCGAAATCCAGCACCACATCCGCAGCTGCGGCATGCTCCCGAA	
   3112562	    36	 100.0	    36	....................................	GCGAGGAACCGTCCCACCTGGGCCTGCCCCCAGCGG       	
   3112490	    36	 100.0	    38	....................................	TCAATAACACTTTTTTTGAGCGTGGCGCGGTTGAGAGT     	
   3112416	    36	 100.0	    38	....................................	ACGGAAACGCAGCACCAGCCTGACAATCTTATTCTCGC     	
   3112342	    36	  94.4	     0	..................................TG	|                                          	
==========	======	======	======	====================================	===========================================	==================
        18	    36	  99.7	    38	GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                           	       

# Left flank :   TTCAGTACGCCCTCGACTTGCAACTGCAAAGCCTCGTGCGTGTTATCGAAGCCGGGCACCCGTCGCGGCTCGTCGATATCGATATCACCTCCGAGCCATCCGGAGCCTAAATGCCCACTCGCAGCCGTGAGGAGTACTTCAATCTCCCGCTCAAAGTGGACGAGTCCAGCGGCACTATAGGCAAGATGTTCGTCCTCGTAATATACGACATCAGCGACAACCGGCGGCGGGCTTCACTTGCGAAGATCCTGGCCGGGTTTGGCTATCGCGTCCAAGAGTCCGCATTCGAAGCGATGCTGACGAAGGGCCAGCTCGCGAAACTAGTTGCACGTATCGACCGCTTCGCCATCGACTGCGACAACATCCGGATCTATAAGATAAGAGGTGTTGCGGCAGTTACGTTCTACGGAAGGGGACGGCTTGTCAGCGCAGAGGAGTTTGTGTTCTTTTGACATCATCAGCAGGCATTGTTACCACACGCTGGACGAATTGTCCATAGA
# Right flank :  AACCGCCCCGGCATGTCCGGAGACTCCAGTTCTTGGAAAGGATGGGGTCATGTCAGGTGGTTCATCGAGGAGGTACCCGCCGGAGCTGCGTGAGCGGGCGGTGCGGATGGTCGCAGAGATCCGCGGTCAGCACGATTCGGAGTGGGCAGCGATCAGTGAGGTCGCCCGTCTACTTGGTGTTGGCTGCGCGGAGACGGTGCGTAAGTGGGTGCGCCAGGCGCAGGTCGATGCCGGCGCACGGCCCGGGACCACGACCGAAGAATCCGCTGAGCTGAAGCGCTTGCGGCGGGACAACGCCGAATTGCGAAGGGCGAACGCGATTTTAAAGACCGCGTCGGCTTTCTTCGCGGCCGAGCTCGACCGGCCAGCACGCTAATTACCCGGTTCATCGCCGATCATCAGGGCCACCGCGAGGGCCCCGATGGTTTGCGGTGGGGTGTCGAGTCGATCTGCACACAGCTGACCGAGCTGGGTGTGCCGATCGCCCCATCGACCTACTA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,12] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.40,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [40.0-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,1.42   Confidence: HIGH] 

# Array family : NA
//