Array 1 30462-28444 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZRC01000015.1 Lactobacillus jensenii IM59 contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 30461 36 100.0 30 .................................... TTCAATTTTTTGTTTATTGCTAGCTTGATT 30395 36 100.0 30 .................................... TGTCTTCGCCTACTTCTTCATGGACATTTA 30329 36 100.0 30 .................................... CATCGCCTTGGAACACCGCTGGAACACCGT 30263 36 100.0 30 .................................... ATCATATATTTTTAGACCCCGAAGCCCTAG 30197 36 100.0 32 .................................... AAGTCACGGCTAACTACGTGCCAGCAGCCGCG 30129 36 100.0 30 .................................... AAGAAATTGCACAATCTTTAGAGCTAATGT 30063 36 100.0 30 .................................... AGTAGCGTATTAAATTTAGCTTCAGGATAC 29997 36 100.0 30 .................................... TTGTTCTGCTTCCATGTTTACCTCCTAGAA 29931 36 100.0 30 .................................... CCACAATGCTGACAAACGCTCAGCTGATAT 29865 36 100.0 30 .................................... TCGTGAAGCCTTTGAAAATGTACAGAAAAA 29799 36 100.0 30 .................................... CTTTCGATGGCTTGCTGCTCTTATCCCGCA 29733 36 100.0 30 .................................... AGTTTTGGAAAAAATAGGAGGTTTAAACTA 29667 36 100.0 30 .................................... TTGGTTCGAAAAACGTTTTGCAACGTTATA 29601 36 100.0 30 .................................... TTGATTGACTCCACTCGTTTGCCCAGACGC 29535 36 100.0 30 .................................... CTTTCAAACCTCTTTTAGCCTGTGGAAGAT 29469 36 100.0 30 .................................... CTCAGATGAAGAAGACAAAGACAAGAATGC 29403 36 100.0 30 .................................... AAAGTGGAATTTCAGTTGGACTCTTTACAT 29337 36 100.0 30 .................................... ATACCGTGGAGATTTGATTAACTGGTATAC 29271 36 100.0 30 .................................... TTCCTTTATTTAGCATCGAAGCCCTCAGAT 29205 36 100.0 30 .................................... ATCATACGTGAAATCAAGAAGTAGAGAGGC 29139 36 100.0 30 .................................... GAGTAGCCTGCTTAGTGCAATCACTGTATC 29073 36 100.0 30 .................................... CTTATTGTGCTTTTTGAAGTAGTCAGCATC 29007 36 100.0 30 .................................... AGGTGTTTTCCCAGAATTAGACCTTGATGA 28941 36 100.0 30 .................................... TGTCATGTAAGCACCGTGCTTTCTGATAGC 28875 36 100.0 30 .................................... TGGACATATTGTTGCTTTTAAAGCTGATAT 28809 36 100.0 30 .................................... AGACGGTGTAATTGCTAGTTGTGAAGAGGT 28743 36 100.0 30 .................................... TAGAATATCGTCCTTGTTGCTTTGGTTTAA 28677 36 100.0 30 .................................... TCGTTTTAGCTCTTTCAGGTAGTAACTCAT 28611 36 100.0 30 .................................... AGAATACATACGGCTCATCAATAATAGAAA 28545 36 100.0 30 .................................... ACTAGCAAAAGAATTTACTACTATCACTAT 28479 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 31 36 100.0 30 GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Left flank : CACAAGATTGTCTTAATTCTTATCTAACTAAAATTATTTCAAATTTATTTGAGAATATAAGTGAAAAGCATCGGAATAGAATATTTGATAAATGGAGGCAACTTAGCACCGATATTCAAGATATAATCTTTATGACTGACTTACCAATTGAAGTCAATGAAAATGTAGATTTAAAAAAGTTATTTAAATTTGATGGAATTCATTTTGATGATTCTGTACTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAATGTAAGTCATTATCTTACAAAAGAACAACTGAATAACTTAATTACCTTTGTAAAAGAAGTAAATGTACCTTTGATATTAATGGAATTTTCATCTCCGAATTTTAAGGTTGTTAGTGGGGATTCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTACAATCTGAGAAGCTGATGATAAAACGTCG # Right flank : TGTTAAATTTAAAACTACGTATAACAAAAAGTTTTAGAAGGTTGTAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGTATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATATGTTTTTAAAAGTTAGGAATTATCAATTTAACTCTGTATTGACTATAATTATTTTGAATGATAGCATAGCAAGAAGGGAGCTAAGCCTAGCTCCTAAAAAATTATTATTTAGTCATTTTATAAATTACTAATAGTTGAGTGATTATAATCAGTAATTTAATAACAATGTCTAAGCAGTCTTTTATAACGGCTATTCTATAGCCGTTTTTATTTTTGTGCTTTTTGTTTTAAAAGACTAGCGAATCCATGATTTAACGAACTCCGCTATTTGTATAGCGGAGTTATTTTTTCCTCTCAATTTAATACAAGTACCAAAGAACTTTGAAAATAATAGCAATTGGTCTATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //