Array 1 11908-9838 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVCA010000112.1 Acinetobacter bereziniae strain KCJ3K32 NODE_112_length_11907_cov_16.545586, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11907 28 100.0 32 ............................ TAAGTTCAATGCCCGGGGTACTCCTTTCAATG 11847 28 100.0 32 ............................ ATCCTTTTCGAGCGAGCGCACAACCAGTACCA 11787 28 100.0 32 ............................ ATGAACCGATCGAAAAGAGTAACTGTAGTAAT 11727 28 100.0 33 ............................ ATTGCTTCACCTACCTCACCAACAAAGTTTTCA 11666 28 100.0 32 ............................ TAAATTGGCTATGCATTATATTCACATTTCTC 11606 28 100.0 32 ............................ CGCAGGGTCACCAGTTGAGAAACGAGTGGGAT 11546 28 100.0 32 ............................ AAAAATGGCGTTTGAATCCGCAAATGTTTGAT 11486 28 100.0 32 ............................ TACGACTTTGTATGTAAATGATGATGAAACAC 11426 28 100.0 32 ............................ GTAATGCAGTCATTACGCCTTTCTAGTCTTAA 11366 28 100.0 32 ............................ AATTTGTCCAACCCGGTACGTTAATTGGTTTT 11306 28 100.0 32 ............................ AAATGCTTGGTAATGGTGCTGTGACTGGTGAT 11246 28 100.0 32 ............................ ATTAAACCAATGGTGATTATCAAGACTGCGAA 11186 28 100.0 32 ............................ TTTAATACTCTAATTGCCTTTTCGACTTCATA 11126 28 100.0 32 ............................ TTGAACACCAACAAAGAGAGGTAATTCATCAA 11066 28 100.0 32 ............................ AACCCTTCAAAATCAGCAATTAAATACATACT 11006 28 100.0 32 ............................ TTAATCTGAACGTAAGGTTCATAGGCTGAATC 10946 28 100.0 32 ............................ ATAAGGACGTGTGATGTGATAATGACAACCGA 10886 28 100.0 32 ............................ TAATGTTGTCAATAGCCGTACTTTTAGCGGTT 10826 28 100.0 32 ............................ TTGAGCAATTTTTTCGGCTTGCGCATCGTCAT 10766 28 100.0 32 ............................ AGAATCTGGTCCAGATGTTTTCGCTCATTTTA 10706 28 100.0 32 ............................ AGAATCTGGTCCAGATGTTTTCGCTCATTTTA 10646 28 100.0 32 ............................ TGTGTCCGCAACCAGTGTTTCACGGATAATCG 10586 28 100.0 32 ............................ GACAGTAAAAGTTAAACCCTTGCCATTTATGC 10526 28 100.0 32 ............................ TAAAGAGTGCTTAACTCGATATGATGATTTTT 10466 28 100.0 32 ............................ AGTAAAACAGGGTGATTTCTCACCCTAAAATT 10406 28 100.0 32 ............................ TAATACACCCATTGGAAGATTGACTTCCTCTG 10346 28 100.0 32 ............................ AATGCAGGGGGTAGACCATGTCTCCAGAACAA 10286 28 100.0 32 ............................ ATAGGCACGTTGAACAATTGCAGATTCAATTC 10226 28 100.0 32 ............................ AGAGTAAAAACAATGAAGCGGATAATGCACAA 10166 28 100.0 32 ............................ TTATCAAGATTTTCAATATTCTTGCAGGTTTT 10106 28 100.0 32 ............................ AATCAACCATTAAAAAGGTTGTAAAAGATATG 10046 28 100.0 32 ............................ AATAGCACAGGCAATTATACAAACTGAAAGTG 9986 28 100.0 33 ............................ ATTTACATAGTTCAGCTTAGTGATTAATTGGTA 9925 28 100.0 32 ............................ TACCAATATTTGGGATGATGGTACATTTACTT 9865 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 35 28 99.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : | # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 173-2604 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVCA010000432.1 Acinetobacter bereziniae strain KCJ3K32 NODE_432_length_2729_cov_24.167716, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 173 28 100.0 32 ............................ ATTAACAATTATCGATACTGATGAAAATAAAA 233 28 100.0 32 ............................ GGTTTCGCCCTGGCTAAACAATAATGATATAA 293 28 100.0 32 ............................ GCTAGGGCATCCAGTGGGAGGCTTATCGCAAT 353 28 100.0 32 ............................ ATGTATTCATAACTACCTCAAGTCGCATCTAA 413 28 100.0 32 ............................ AACACCAATTTTGTTGCGAAAGCGTTGAAACC 473 28 100.0 32 ............................ TGTTAAGCGAGGATAATCTACGACCTGAATTT 533 28 100.0 32 ............................ ACAGTTTCAAAAGCGCACTGAATGAATTCTTG 593 28 100.0 32 ............................ ACCAACCGACGGTTGTAAAAACGGTGAAGCAT 653 28 100.0 32 ............................ TATTAATCAATTGCTTATTAAGTTCAATGCAT 713 28 100.0 32 ............................ TAAGTTTTGACTTTTTTTAATGCGTAATATGA 773 28 100.0 32 ............................ AAAGACATTGTAATCTACAAGTCGGAACGTTT 833 28 100.0 32 ............................ TGTAGGGGTTAAGACTTCGATTTTATCTTGAT 893 28 100.0 32 ............................ CAAATGATTATGTGTTTACAGTAAAAGCTGAA 953 28 100.0 33 ............................ ATTTCGATCAGTTACAGGTTCACTCTGCATACA 1014 28 100.0 32 ............................ TATCCATTGGCACTATATCAACGTAATCTATA 1074 28 100.0 32 ............................ TGACACATATGACCCCGAATTGCCAAGTTTAG 1134 28 100.0 32 ............................ AGCAACAGGATCAATGATAACCGCATTAGCAC 1194 28 100.0 32 ............................ TAGTGGTGTTGGTATTTCTTACAGAGAAGTAG 1254 28 100.0 32 ............................ ATATAGCCGAATGCTGTAATACCAAACTTGGC 1314 28 100.0 32 ............................ TGTTTCTAAAATTTGTAATGATTCACAAATGA 1374 28 100.0 32 ............................ TTAAACAATGGAAAAACCATTTATCACCTCAT 1434 28 100.0 32 ............................ GTGAGTGTCGTTAATTCGGTCTACAATCTCAT 1494 28 100.0 32 ............................ AAACACTCCTTATCCTGATAATGTAACTCCAC 1554 28 100.0 32 ............................ ATCCTGCACCTTCTACAATTCCATAGATAACT 1614 28 100.0 32 ............................ GATCTCGTTTGATTTTGTGGTTTCTTTCATAA 1674 28 100.0 32 ............................ TTTCAGACGATGTTCTCTTGAACCTGATTTCA 1734 28 100.0 32 ............................ ACAGCACCAGTTTGCAACATCATTAACTGCCA 1794 28 100.0 32 ............................ TTGTGAACAGATCTAATATTGTAGTAGCTGCG 1854 28 100.0 33 ............................ AACCACGCCGTTTTCATTGAAATCGCCATAGCT 1915 28 100.0 32 ............................ ATATCTGCTGTGCTAACTGTGCTTTCTCGTTG 1975 28 100.0 32 ............................ AATATAATATCCTGTCGTGAAATTGACATGAT 2035 28 100.0 32 ............................ TTGTGAACAGATCTAATATTGTAGTAGCTGCG 2095 28 100.0 33 ............................ AACCACGCCGTTTTCATTGAAATCGCCATAGCT 2156 28 100.0 32 ............................ CAGCGATGCCAATGCTCTACAAATCGGATTAA C [2161] 2217 28 100.0 33 ............................ CGATGCTAGGTGTGGATTGGGGGGTTTAGTACA 2278 28 100.0 32 ............................ GCTAATTTGCATAAGGTTTTATTTATCACTGA 2338 28 100.0 32 ............................ GAAGGGGCTAACTTTTTAAGCTGCATTAGCAC 2398 28 100.0 32 ............................ AGACTCTAAATCATGCGGTTGAACAGGCTTTG 2458 28 100.0 32 ............................ ATTGTGGTAAAAATTAACTTAAATTTGATTTT 2518 28 92.9 32 ...........C......T......... ATGTCAACACATGTATTACTGGAAGTCTAAGA 2578 27 78.6 0 ...............A..C.-..T.T.T | ========== ====== ====== ====== ============================ ================================= ================== 41 28 99.3 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTATAG # Right flank : GTGCTAAATAGAATGTTTATTTTTACTTGATTATTTAGATAATATTTATAAAAGTCGTTAATCGATTTTTATTCCGAAACCCCTTAGAAAACGGTTTTGTTTAACAGGATGATCAGCTTTTTTTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 19447-16596 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVCA010000007.1 Acinetobacter bereziniae strain KCJ3K32 NODE_7_length_34098_cov_21.101999, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 19446 28 100.0 32 ............................ TTTAAACTCAACCTCAGCACGACACCAAGGAC 19386 28 100.0 32 ............................ ACAAAAGCAGTATTCACAACAACCAGTTCAAA 19326 28 100.0 32 ............................ AAACCGTATGACACGCAAATTAGCGCAAATTA 19266 28 100.0 32 ............................ GTTTAGCCACTTTTGACAATCAGACTGCTTGA 19206 28 100.0 32 ............................ GACATAGAGCCTTTGATATATATGGAATTACA 19146 28 100.0 32 ............................ TTTTACTTTAATATTTCCAGTGATTCTTTTTT 19086 28 100.0 32 ............................ TCTAATCATGAAACTTGGTGCGAAATTGCCAT 19026 28 100.0 32 ............................ TGATTACTAAAAAAAGGAGCCTGGATAAGGCT 18966 28 100.0 32 ............................ TACTGGATGCCCTAGCGGTTATACAAGTGGTT 18906 28 100.0 32 ............................ TAACTTTACCCCTAATGTTGTCAATGCTCGTA 18846 28 100.0 32 ............................ TTAATGTGCCCGGCTGGACAAACTGGAACGTA 18786 28 100.0 32 ............................ AAGTTTTTTCGTGAAGTTCTTGTTGTTCAATT 18726 28 100.0 32 ............................ GGCTTCGCCCTGGCTAAACAATAATGATATAA 18666 28 100.0 32 ............................ GTCGCCATTTGTATCAACGTTTGGTTTGGGTT 18606 28 100.0 32 ............................ AGCTTCAAGCACCATGTACTTTCCTGCATTTT 18546 28 100.0 32 ............................ AGTTGAAGCAAAATTATGTTGATCGAGTTTCA 18486 28 100.0 32 ............................ TGCTGATGCGCTTGCATTTATCAAGCTATATA 18426 28 100.0 32 ............................ TAAACGTCTTGAATTTACACATGCATCCGTAA 18366 28 100.0 32 ............................ TTTAGACGTTCTTTTATCACCATCGACATATT 18306 28 100.0 32 ............................ AGAATCTGGAAGTATTTTAGGGAATTTTGGAA 18246 28 100.0 32 ............................ ATCAGCAATTTGCAGACAGCAGTAATATTGTT 18186 28 100.0 32 ............................ TTGTTATTTACAATTTTGTACTCTTCTGGAAC 18126 28 100.0 32 ............................ TAACAAGCCTTATGATCAGGAAGATATTCAGA 18066 28 100.0 32 ............................ AAGGCGCTTAAAGAGCAAAGACAATTTTCTTT 18006 28 100.0 32 ............................ AATGTGATTTGTAATTTATATCGTATTACATA 17946 28 100.0 32 ............................ TATAGAGCTATTGAACACGGCGATACATTCCA 17886 28 100.0 33 ............................ TGACCGTTTAATTTTTTAGCCTTCTCGGCTTCA 17825 28 100.0 32 ............................ TTGAACGGATTTAACTTTAGTTGGATTATTGC 17765 28 100.0 32 ............................ TTTATACGGCATCCAATACCCATCCAACCAAT 17705 28 100.0 32 ............................ TTAACGGCGAGATCGACGAGACTGTACGCTTC 17645 28 100.0 32 ............................ TCATCAATGATCACTTTACCTTGTAAACCGCG 17585 28 100.0 32 ............................ TTGAACCAAACCGTAAATAGCTGCGCCTGCTA 17525 28 100.0 32 ............................ TGCTGCGAATACAAATGTAGGCGTCATAGCAA 17465 28 100.0 33 ............................ TAGCAACTGGCAACCAAAATCTAAAGCATGAAT 17404 28 100.0 33 ............................ ATCCACTCCCATTCGATAGATGCTGATCTGCCT 17343 28 100.0 32 ............................ AAAGCTTCTGTGTCTTCACAAGGCGTTATTAC 17283 28 100.0 32 ............................ AATTAAGGGAATAAGTAGGATAGCAAAGAGTT 17223 28 100.0 32 ............................ CAAATCAAACATTAGTACCTGTCTCAGACACA 17163 28 100.0 32 ............................ TGTCTGAAGCAATAAGTAGTTATATTCAGAAT 17103 28 89.3 32 .......A..G......T.......... TTCTCAAATTCAATCCATTTGTTATTTAGGGC 17043 28 89.3 32 .......A..G......T.......... ATATCGGGAACGTACCTGAATTTGAGCTTGAA 16983 28 89.3 32 .......A..G......T.......... AGTAAAACTATTGGTAATTGAACTGGACAGCG 16923 28 89.3 32 .......A..G......T.......... AGTAAAACTATTGGTAATTGAACTGGACAGCG 16863 28 89.3 32 .......A..G......T.......... TAACTTGAAATCAGAATTGCTTGCAAAGTAGT 16803 28 89.3 32 .......A..G......T.......... ATCCTCTTCGTAAATATCAAAACCAATTCTTA 16743 28 89.3 32 .......A..G......T.......... TGCAGAAGACTATATAGACAAAACTGTCGATA 16683 28 89.3 32 .......A..G......T.......... TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 16623 28 67.9 0 .......A..GT...AATCC....A... | ========== ====== ====== ====== ============================ ================================= ================== 48 28 97.5 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : TTGAATATAAGAAAATGGTTAGATCGGTTTCCTGATTATGTGCATATCACAGGTGTACGTCCTGTTCCTGAAAAAGTAACGGCTTACGCAGTTTATAAACGTAAGCAAGTTAAAACCAACGCTGAACGTTTGGCTCGCCATCGAGTCAAAAGAGGAGATATTGGCTTTGATGAAGCATTGAGCCGTTATCTTCAAGTGGTGACAACAACTGATTTACCTTATGTCCAAATGCTAAGTTTAAGTACATCGGATGAACAAGATAAAAAGCGTTTTAAGCTATTTATAGAAAAGCAGATCACTGAAAAATCTGAAACTCAGGTTTTTAGAACATATGGGTTAAGTTCTGTGTCTACAGTACCCGAGTTTTAACCCAATATTTTTTCACTCTTTAACAGTCTAATTAAATCAATAAGTTATGGTGGTGGGTTGAAACTTTGGTCTTTTGTAGATTTTTAGTCTTAACTCACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : TATAAACGCCTTAACATCTTCGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAAGATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //