Array 1 122061-121095 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPU01000064.1 Enterocloster bolteae strain MCC333 NODE_73_length_409512_cov_37.922684, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 122060 33 100.0 34 ................................. TTGTTTTGGTTGGAACTGTTGTGTATATAGCTTC 121993 33 100.0 33 ................................. CCATCCATCCGGGATATGGAATGGATTTATTAC 121927 33 100.0 33 ................................. TTACCGCCTTATCCTCTTCCGGCTCTCCCTCCG 121861 33 100.0 34 ................................. TAATGTATCCCCTATCATGGAGAAAAGCGAAAAA 121794 33 100.0 35 ................................. AAATGCAGTAAGGTTATTGTCAATATCCTCTATAC 121726 33 100.0 34 ................................. GGGTGTGAAATAGTCAATCGGCTTTTTGGTAACC 121659 33 100.0 35 ................................. TGATTTTGTTATACTGTTGACTGCCTGGACCATTG 121591 33 100.0 33 ................................. ATACTCTGCTGTGTGGGCAGCCATGACTGCACG 121525 33 100.0 33 ................................. GGATGTATCTCACATTTAAGGGAGGATAGTTAT 121459 33 100.0 34 ................................. GACTATCTGGCAATCCCAACAGTGGAAACGGACG 121392 33 100.0 33 ................................. TTCTTAAATTCCTTGGCCATCCCTTCCATAAAC 121326 33 100.0 34 ................................. TCATCTGAGATATCACAAATAGTTGTAGACCGGC 121259 33 100.0 33 ................................. AATTTACTATCCTCCTATACAGACACACGCACC 121193 33 97.0 33 .........A....................... TTATGACAACTTTGGAAGCCCATTGAACCACAC 121127 33 81.8 0 ......................CA..CCA...G | ========== ====== ====== ====== ================================= =================================== ================== 15 33 98.6 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : AAGTTCTGGAACTACCTGAAAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAGGCGGGAAAGCTGGCTGCTGTAATGGAACGCCAGGGCAGAGTACTGCGTATTTACAATGCAGAAGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGTGCCATATATCCGGAACAAAAGAGGCTTGTATTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCTTTGCAGCATGCAGGATATATGCGGGAAATGAAGGATTATGTAATATATAAGTAGAGTTGGTTTCTGTGAGTTGGGAGCCCTTCAAACCAGGTGCGAATGCCAAGCTGACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGAGGAAAAGGCTGTGAAAGCGGGCTGGGTGAATGGACTGAATTGGTTGAACTGGGGAGAGAAGAGCATAATGCATAAAATGTTAGGGGGGATGTGGAGCAGGTTTGGATAATTTTGCT # Right flank : ATACCTGTAAGCCCCTAAATTGATGCAAAAGGAAAATTGCTCCCCACGTACCTAATGCATTGAAAGCAGCCATAATTATATATTGAGAATTCGCAAAACATCAGTTAAAAGAACATATTAACAGTATCCCGGTCAACAGGGAATCCGTTAAGCGCATACCACCCCCCCCCAGCAAATAACATCCGCCCCAAAAAACACCAACATAAACAAAGGAGTAACACATATATGATTGAAATAATCTATAAAGACAAACGCTTTCTTGTTAAGGGCAGCTTTTCCATAGGAATAGCAGGAAACTATGTAAATGAGGATTTTGGGGACGAGAATATCATGATTAACGATACGTTAGAGGAAATCATGAAAGAATTGAAGGATGAGGACTCCTTTTGGTACAAGCCGCTGTTTCCCTATCTTAAATCTGAGACAGCAGACAGTGGCGGAATAGCCAGAGGTCTTACCGCGTACTACAATCAAAAGGAAAAAGAAATCAGGGAGAATGA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 749561-749059 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPU01000089.1 Enterocloster bolteae strain MCC333 NODE_110_length_749480_cov_49.050388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 749560 33 100.0 33 ................................. CACATTTTCAGATGCAAACCGATTTAAAGATTG 749494 33 100.0 33 ................................. TTTCTACGTCGTTAAAAAGGTGCGCATATGTTT 749428 33 100.0 34 ................................. GTTTTGTTCCCTCTGCTGTGCAAGCAGCTGCTGG 749361 33 100.0 34 ................................. AGGAGGAGTTTGGCCGGCTCTTGAATCTACTGGA 749294 33 100.0 36 ................................. CCTGGACATTGGGAATGTGTTTAAGGTCTGGAAGTA 749225 33 100.0 34 ................................. GACAGCTCCTCTCAGGCCCACCAGCGACATAGCC 749158 33 100.0 34 ................................. ATTATGATGAGACATTTGTTGTTGATATGTCGGA 749091 33 81.8 0 .............C...........A..TTCC. | ========== ====== ====== ====== ================================= ==================================== ================== 8 33 97.7 34 GTCTCCGTCCTCGTGGGCGGAGTGGGTTGAAAT # Left flank : | # Right flank : TTCCGGTCAGTCTCCGCCCTCACAGCGAAGTAAGCTGAGAAGCCATCAAATTCAGGATTACGTTTAGTCAAAACATCATTCCCCTTTTTCTAAGAAAACAGTATAGTTTGAACCATAAACGTTAGCTATAACTAACAACACGCAGCAAAAAAGGTGGGCGAACACCCACCTTTGCCATAAACCTGTTATAGGGTATAAAGAATGCGGGCCTCCCTCACCCTTTCCATGCCCGAATCTCTCTAAGCCCCGGCACCAGCACCTTGGCGCTGGTTTCCAGAATGATCCGTCCTTTTTCAGCCGTGGCGCCTGACGGGTCTCCGCCGATTCCTATGGGTTTGCCGTCTGCTGTTTTCCAGTCCTCGGATACCCAGCCAATGGATACGTTTCCATAAGGCCTCAGTGCCTGATTGTCCTTAAATGCAGTCGGAATTCCTGCCTCTGAGGTATCTAACTTTACCAGAGACGGGTCCACAGCCATGACCATGGAGGTTTCCATCTCG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGTGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 283682-284252 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPU01000002.1 Enterocloster bolteae strain MCC333 NODE_2_length_284172_cov_56.898022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 283682 33 100.0 34 ................................. CTTGGGATTGAGTGAGTGGTTGGCATGGCTGCCG 283749 33 100.0 35 ................................. ATCTGAAGGGATAAAGAGGGATTTTAGCCCCTCTA 283817 33 100.0 33 ................................. CGTAAGGGAACCATTCAATCGGTCGTTATCAGA 283883 33 100.0 34 ................................. TTCTATACAGAGTTTTAATCGCGCCTCCAATTCA 283950 33 100.0 34 ................................. ATCAAGAGAAAACAAACAGTATTCCGTGCTGGAA 284017 33 100.0 36 ................................. ATTCCACTGCCTGTCAGCCATGGACTTATACATATC 284086 33 100.0 34 ................................. CCTCTACCGGGATAGTGATAAGCTGCATAAAGCC 284153 33 100.0 34 ................................. AACCATGATAGACGGTAAGAATGTAGAACATACA 284220 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 9 33 100.0 34 GTCTCCGTCCTCGTGGGCGGAGTGGGTTGAAAT # Left flank : TGCTGATACTGATTACATATGATGTGAATACGGAAACCGCTGCAGGCAGGACCAGGCTGAGAAAGGTTGCAAAGCAATGCGTTAATTACGGCACCCGCGTCCAGAATTCTGTATTTGAATGTATTTTGGATAATACCCAGCTGATAAAGCTAAAAGCCATACTGACAGATATCATTGATGAGCAGACGGACAGCCTTAGATTTTACAACCTGGGAAATAAACACACTACAAAGGTTGAACATGTTGGGGTGAGTAAAGGGATTAAAGTGGAAGAGCCGCTGATATTCTGATCTGGCTGCGGGTGGTAAGGAGGTTTCAAATAGTTTGGTGCGAACCAGAAGCAAACATGAATTTACGGGGGGATTCGCACCGGAAAAACTGCACAATGAGAACGGTTTTGGATGTGTGCAGGGTAGGTTGGCGGTGATTTGAGGGGGTATGATGTGATTTGATTGTGGAAATGTGATGAAGAATTGTTGGTTTTTTTGTGTAGTATTGCT # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGTGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //