Array 1 228939-229389 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAH010000002.1 Psychrobacter luti isolate Psychrobacter luti NF11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 228939 36 100.0 33 .................................... CATGACAAATGGTAAGTTCTACGAGATGTTCTC 229008 36 100.0 33 .................................... AATCAAAGACTGCGCGACTTCTTTTGGTTCAAT 229077 36 100.0 33 .................................... AGTAACTGAAACCATTGAAACAAGGATTCATGT 229146 36 100.0 33 .................................... ACCAGTAGCAGTGAATGCACCTAACTTAGCACG 229215 36 97.2 33 ...................T................ GTTGGCTGAATTAAAAGAAGAACTAGCCACGTT 229284 36 100.0 34 .................................... AGATGGGCTTGAAGATATGGTACAAGATGCAGAT 229354 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================== ================== 7 36 99.6 33 GTCTTAATCCCTTACAAATCAGGGAGGCTTTCAGAC # Left flank : AATCACTACAACTATAATATTTTGCAGCTACAACAACCTTCCCATTATCATTTTTATAGCCACATTTAATGTCATTGTTATTTTCTACCTCAAAACTCTGCAATGCAGCTACAGCAGGTAATGTCAAAAATGCGCCACAGAAGCCTAAAGCCAGTGCCGTTTTTTTATAATGTATCTTCATAAGCTTCTCATTAAAAGGTGTGATAAAGGGATGTGATTGTCAAGAATTCATCTCTGCTGTTTTCTATAGCTATATATGTAGCTTTGCACCGCTTTCATAACCTTAATCATACTACTCAACTAATTTTTAATTATCAATCTACTAACAAGTGGAAACGTATTTATTATTTAAAATAGATGAAACTAAGCTGATAAATGAATAAAAAAAGACCACAACATATAATGTTGTGGTCTTTTTATGAAAAACACTTTATTGCTAAACTTACGAATCAGGAAAGCTTTAAGACTACTAAAGGAATATAACCATGACTACATTAACT # Right flank : CTGTACAACCCTTTTTATTATCAATTAAATCAATAACTTACACCTATAAAATAAACCGACTAATGTTCGGTTAAAAGTTGATGTTTTTTTGACCAATTTTTAACGATTAATTGTACAAATAATAAGCAATTATACGTCTGAAATGTTAAATAACGACTATAACCTTCGTCAGATTGAGTCTGAAAGCAACCCTGATAAGTCAGGGCATAACTTTTTATGGTTACCTTTATTATGGTAGTACATGCTAGCCGTTGAGGCAATGCTTATTTGGCAAAAACACTAGCAAGCTTGTAATAATCATCACTCATAGCTATCGTCAGTATAATAGTCGCCAGTCAAAACGATAGTCAAAATAGGTCTGCTAGTATATTTAGAGGAGTAAGTATGAGCATATATTTGGTCAGTCGTCATCAAGGCGCGGTAGAGTGGATGCAATATATGGGTCATCACTACGATCAGCATCTAACGCATCTCGATAATTATGAAACTCTGTGCGCAGA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCCTTACAAATCAGGGAGGCTTTCAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 230649-230407 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAH010000002.1 Psychrobacter luti isolate Psychrobacter luti NF11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 230648 36 100.0 33 .................................... TTGACTGAAGTATCATCTGAGTATTCTTTAGTA 230579 36 100.0 33 .................................... TTACGAGCAACTAAGTCAAACTCTCTCTTTGAT 230510 36 100.0 32 .................................... CCCATGAATAATCTACTATCTTTGAACTTAGG 230442 36 80.6 0 .....................G......TGAG.AG. | ========== ====== ====== ====== ==================================== ================================= ================== 4 36 95.2 33 GTCTGAAAGCCTCCCTGATTCTTAAGGGATTAAGAC # Left flank : AGTAGGACGGTATCATTATCGTAAGATAGTTCTAATGGTGGTTAGCAATCATGCTGATTATATTGGGAGCAAGCATGGCATCGATCTTTGGTTTGTTGGTGATTTCTTTGATTAGTGGCTCAGCTATCTTGCTTATCATCGCTATGATTGGCGGCTTTATCAAAGCAGTGATGTATCTGTTTGGTCATCGCTGAGTACAGCGGATATGATGCTACGGTGAGCAGTCATCATGGAGTTAGCGGTTGCACAGATGACAGGCTTGCATTAATATACATAGGTAGTCATCATATGGCTATTCCCTAAAAGTCAGGACTGCTTTCAGAATTTATCTGACGAAGATAAGTGTCATTATTTAATATTTCAGACTTGTAATTGCCTATTATTTGATCAATTATCAGCTAAAAATTGATCAAAAAAGCATCAACTTTCAAGCTAACTTTTGTCGGTTAATTAAATAGGTATAAGCTATTGATTTTATTGATAATAAAAATAGTTGTACA # Right flank : GTTTAAAATTGCATGCCAATTTTAGCTTCGCAAGTAAAAATCCTTTAAATAGGATTTTTTGAAGACTTGTTATCATCGTCTGATCAGAAAATCATAGATTTTCTCTTGCGTCGGGGCAAAGTAGTGCTTTGCTGTATCCTTCCTCATCCCTGATTCGTAAGGGATTAATACAACATAATGTTTGCCCAACCATCTGCTGGTGTGGTCAGAAAGCATCTGTGATTGCTGAAGGTAGGGAGCTGCAAACTCAATTTTTCTCAAACCAAGAAAGCCACTTTATTAAGGTGGCTTTCTTGGTTTATGGGCAGCTATTAAAAAGCAGCGACTATGAGGTTGTCTTAACTATCCGTCTTACTTCGTATGCTTCGAGCTTTGCATCGAGATTAGATAGCTGATTAGCTGTCAGCTCAATACCTCGCAAATGCTCTGGAATATATAAGCTCAGATGTCGATAACTCACGCCACACTGAGCTAGGTCCGCCACGATATTGATTGGTAAC # Questionable array : NO Score: 2.62 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAAGCCTCCCTGATTCTTAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 233046-232592 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAH010000002.1 Psychrobacter luti isolate Psychrobacter luti NF11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 233045 36 100.0 34 .................................... TTATTAATTGTATAGAAGAACTTCCTTACATAAT 232975 36 100.0 33 .................................... TGCGTCTGCACTGATACATTCCCAGAAAGCTTG 232906 36 97.2 34 ............A....................... AGCTGAGCTTTCTTGCGTTCGCTATTAATCTTGG 232836 36 100.0 34 .................................... TCAGGGTCTGCCGTGTAACGTGCAATCATTGCCT 232766 36 100.0 32 .................................... TGACTTGTTCTTCTCACGTCGAGCATTCTTTC 232698 36 97.2 34 .....................C.............. AACTTGAATGCTACGATGGCTGCAACGATGTAGA 232628 36 88.9 0 .............................G.G..GA | T [232599] ========== ====== ====== ====== ==================================== ================================== ================== 7 36 97.6 34 GTCTGAAAGCCTCCCTGATTCGTAAGGGATTAAGAC # Left flank : AAATACAGATGAATGAAAGAAAAAATCGTCACGGCATAATACTATAGCAAATCTAAGTATTTGTTTAGAAAAATACGATACGATAAGAAATGCCAGGCTATAAAAAATACAAATATCTCAGCGCAGTGTATCAATATCCAGCGCAAACGCTATAGCAGCACAAGCTTGCTAAAGATTGTTTTAAGTAAAAAGCCAAGCGTTGCTGTTTGCCTAATATTAGTTACTATCTGATAGATAAGCGTTGCATCACGAGCGCCCATCTATTACCATAGCAAAGTAGCGTCAAAAATGTTATGCCCTGACTTATCAGGACTGCTTTCAGACTTTATCTGACGAAGATAAGTGTCATTATTTAATATTTCAGACGTATAATTGCCTATTTTTTGATCAATTATCAGCTAAGAATTGATCAAAAAAGCATCAACTTTTAAGCCAACATTAGTCGGTAAATTTAATAGATGTAAGTTATTGATTTAATTGATAATAAAAATGGCTGTACA # Right flank : ATAGTGAGTGCCTGGGAGACACTTTCCCGAAGCACAAGGCAAGAGCTACGCTTGCGCAGGCGTTAAAATTGCATGTCAGAAAACTATAAACTTTCTCTTGCGTTGATATAAAGCGCTTGCGGACTGCTATAAGACCAAATCAATAAAGCCACCTACGAGAGGTGGCTTTATTGGTTTAATCACTATTTGATGTGTTACTTACTCAAGATACATTTGCAGCTCCAGTAGTAACTCACAAAATAAACGCAACTGCTGCTGTGACTCTTGTCGCTGCGCCTCAATGCGCTCAAACTCATCCAATGCTTTATGGGCGTCATTTTGTAAGATAGCAAGCTGCTGATCTAGCGTCTGTCTTTGATCATCAGTCGCTTGCTCCTGCTGTCGCATCAGAGCAAGCCTAGAGGTAATGCTTTTAGTCATACGCTCATTGAGCATAGACAGTAATTTCTCTTGTTCTTTATAGTGTAAAGCACATGCCTGTGCCGTTTGAAACACAAGAT # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAAGCCTCCCTGATTCGTAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 4 250618-250860 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAH010000002.1 Psychrobacter luti isolate Psychrobacter luti NF11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 250618 36 100.0 34 .................................... ATCGATGGGATACTGGCGTGATGCGTGACTGTAT 250688 36 100.0 34 .................................... CATGCCTGCAGGTAGAGTCACCTCATCTGAATCT 250758 36 97.2 32 ....................T............... CCACCAAAGTGTGCTTGCGCGAACTTCGGGTC 250826 35 88.9 0 ................A.........A....T.-.. | ========== ====== ====== ====== ==================================== ================================== ================== 4 36 96.5 34 GTCTGAAACGCTCCCTGATTCGTAAGGGATTAAGAC # Left flank : TAAGCAAGCTGTATTTTAAGCTAAGTTAAATTCCAGCAAAAAAATATTCAGCTACCCTTACTTTTGTTTGTCATATTATTTCGGCTGTTAGCATAGCAGAAATGAATCATCTATATAGCCAGAATAACGCAAAACCACTCAATTAGTGATTATCACAAGCTTGTCATATTTTGACTTCATTACATTAGTATTGTAAGAGTCTTTATTGAACTTATATTACTATTGCACAGTGGTTGACTCATTATTGCAAAAGTTAGATATTTGTTTTACTATAACAGCGTTGCTTTTTATTAAGTGACCCCTAATTATCAGGGCGTTCTGGACTTAATCTGACGAAGATTACTGTGGTTATTTAACGTTTTGGACGTATGATTGGTTATTATTTACACAATTTTCATTAAAAAATTGGTTAAAAAAGCATCAACTTTTAAGATAACTTTTGTTGGTTAAATTTATAAATGTAAGTTGTTGATTTTATTGGTAATAAAAATCGTTGTACA # Right flank : CCTATAAAACAGAAAACCACCTTTCGAGGTGGTTTTCTGTTTTTAATATCCTGATTGTCGCAAGCTTGCCATTTAAAGATCAAAGTGCTCCTACCCTGCATAATGGGCTCATTCAACAGCCAGTGGAGAGAGACCGATGATCGCATTCAACCGAGCAGCAAACACTCAATCAGCGCAAAGCTTAGCAGAGCATATATCCCATGCCGCTGAACAGTTACAACTTCATGGTTTTGATCGCTACTACAATGCGATGGTCGGCGCTTATGTGTCTGAAGTATATAAGACGCTTAACTACCCTAGCTTTGCCAATGCTACCAACCGTGCGCAGGCTCCACTAACCTCTTTAGAGCAAGCAGTGATATACACAACATTATATGGCAAAAGCCACTTTGATCGCTTTAGCGAGGTTATTGCTCAAATTATGGGTAAAAATAAACGCTCAGAGGCAATAGCTAGAACGATTAATATCGTAGATTACGGCTGCGGACAAGCAATTGCCA # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACGCTCCCTGATTCGTAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 5 254968-255695 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAH010000002.1 Psychrobacter luti isolate Psychrobacter luti NF11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 254968 36 100.0 33 .................................... ACCCCTTTTAATTCTTCTAGCGTATGTTCCTCA 255037 36 100.0 33 .................................... TCCATCTCACCTGTTAATGCGGTTTCGATAAGA 255106 36 100.0 33 .................................... TATTACTTATAGCTTGAAGTCAATCTCTTCTAG 255175 36 100.0 33 .................................... GCCATATCAAAAAGCAGAGGATGTTTAGCAATC 255244 36 100.0 33 .................................... TATTGAGCTCCTGCCATGAATGAGAAGTCATGA 255313 36 100.0 32 .................................... TAGGTGTCATGGTGTTGCTCCGGTTGTTGTAC 255381 36 100.0 34 .................................... ACATACATATTAGCGTATGCGTCAGGACGTTTAG 255451 36 100.0 35 .................................... CTTTTGCAAGGCGGTAGGCTTCTAATATCTTCATT 255522 36 91.7 33 ..........T.......C..C.............. TTACCGTTTATAGGGCACGTATAACGATTAATT 255591 35 94.4 32 A........-.......................... GTAGCTAAGTACTTAACGAAGATTAGCTGATA C [255597] 255659 36 77.8 0 ............G........T...AT..G.G..GA | A [255682] ========== ====== ====== ====== ==================================== =================================== ================== 11 36 96.7 33 GTCTGAAACACTCCCTGATTCGTAAGGGATTAAGAC # Left flank : CAATACTCTGTCTACTATGGCAGTATGACGCCTAAACGCATGGATACCTTTATCACGTCGATACAAAAGATCATACATCCCAACGAGGATGATTTGCGTATCTATGAAGTTGAGCCACTTGAAAACTCATTTGTCATCGGTAAACGTGACGATGAGATTATGTTGTTTAGCGACATCGGAGAGATAACATTATAATGATAGTGGTGCGCGCTTCAGATCGTGATTCAACTTTATTATAATCTTGCACTTATCCGGCACATCTATTATGATTGAGCGGTGAATTTAAAATCCTCACATCCTAAGCAATTAGGGATGGCTTCAGACGCTATCTGACTAAGATACTGGTCATTATTTAAAATTTCAGACGCATAATTGGTTATTATTTATACAACTTTCAGTAAAACATTGATCAAAAAAGCATCAACTTTTAAGCCGACTTTTATCGGTTAATTTTATAGATGTAAGTTATTGATTTTATTGATAATAAAAATCGTTGTACA # Right flank : ATAAGAAAGTATCTAGTAGACAGCTTGCCAAAGTGCAAAGCTAAGCTTGAGTAAAACCCTAAAACAGATAAATTATTAGCCAGTAATCACCAAAATAGCTGCTATTTTCATAGCAGCTGCTTTACCATATGCTCAGAAAAAGGACAGTAATAGCATGACGACCTTAATTAGCTTTTTGGGTGGCGGTAAACGAGGTGGTAGCTACCAAACTACCGATTACAAGTTCTCTCATGGCACTGTTTATGAAAATGAGCGTTACTTTGGGATGGTACTTACCAAAGAGGTCAAGCCTGATAGGCTTATTCTCCTTGGCACGTCAGCTAGCATGTGGGATGTGTTTTTTGTAGCAGGACTAGAGGATCATATAGAGGCATGGAGTACATTATCTGATGCTGTGCAGAGTGACAGCGTTACCATAGAACAATTACAACCATTTGAGCAGTTTTTAACTGATGAGCTAGGCCTGCAAGTGACCTGCCAGCTAATAGACTATGCAAAAG # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACACTCCCTGATTCGTAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 6 257917-258160 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAH010000002.1 Psychrobacter luti isolate Psychrobacter luti NF11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 257917 36 100.0 32 .................................... CTTCATACTTTCTGAATATAGGTACTTTGTGT 257985 36 100.0 34 .................................... ATATGGTTAACTGATTCATTATTTAATTCAATTG 258055 36 97.2 33 ............C....................... ATATCTGCTGCTGTTGGTAATGTGTTCATAATT 258124 36 80.6 0 .........G..C................GCG..GA | T [258151] ========== ====== ====== ====== ==================================== ================================== ================== 4 36 94.4 33 GTCTGAAACACTTCCTGATTCGTAAGGGATTAAGAC # Left flank : TGACTTTGTTACGACCTAAATATATACCGTGATGGGTATATCCTAAGCGCTCAGTAACCAGATGATCGCCTGCTTGTAGTTGCTTATCGAAAAATCCCATCACTACTTTCATCCATCGTTAAAACTGTAATGCACATCATAGCAACGCAGCTATAAAAGTTGATTTATGACAAGCTTGTCATTCATGACTTCAGTCTGCTAAGCAATAAAGAATAAGTGAGCATAGTAACTTACTCTTACCTTGCACTTATCTGGCACATCCATTATGATTAAACGGTGAGTTTAAAACCCTCACATCCTAAACAATTAGGGATGGTTTCAGACGCTATCTGACGAAGATACTGGTCATTATTTAAAATTTCAGACGCATAATTGGTTATCATTTATACAATTTTCAGTAAAAAATTGATCAAAAAATCATCAACTTTTAAGCTAACTTTTGTCCGTTAATTAAATAGGTGTAAGTTTTTGATTTTATTGAAAATAAAAATCGTTGTACA # Right flank : ATAAGTGAGTGTCTGGGAGACACTCAGCTGAAGCGCAAGGCGTAGAGCTATGCTCGAGCACAGCGTTAGAAAATTGCATGCCAATTTTAGTCTCGCAATTGAAAATATTTAACTTTCCATAAAAGCCAAACAAAAAAGCCGCCTATCAATTGATAGGCGGCTTTTTTTGAGCTGAATTCATACATTGTCCGCAAGCTTGTCATTTTATGAGGTGTCATCAAGAAAAGTTGATAATCAACTCAACGCATCAAATAACCGCCATAAGGATAATGACTATGTCAAATCAAGTTCAGCTTCAAATGGATAAAGCCAGCGAATCTATGAATGGCGGTTTTACTGACTACTATCAAAATATGGTGGATTACTTTCATCAGAATCCTGATCAAAACATAACCTACAATACCTTTTCTAACCGTACCAATAGAGCGACCAATGCGCTTATCAGCGAAGAAGAAGCAATATTTTATATCGTGGCTTATGGTTGGCAACATCACCAAAGT # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACACTTCCTGATTCGTAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 7 269570-270227 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAH010000002.1 Psychrobacter luti isolate Psychrobacter luti NF11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 269570 36 100.0 33 .................................... CTAGTTTGCGGGTTTTTCATCAACTGCTGTTCT 269639 36 100.0 32 .................................... CTAACTTGCTTTTCTTAGTAAATAATTTAGGA 269707 36 100.0 33 .................................... TTTAAAGTTCCAGGCGCAGCCGCTACTGGTGTT 269776 36 100.0 33 .................................... TTTAGTTCGACTTTCAATCTTGCTGGGTACTTG 269845 36 100.0 34 .................................... TGCGACTAGGTCAACATGCTCATCAATAGGAAAG 269915 36 100.0 33 .................................... TTCTCTAGCTTGCTGGCAAGCTTGAAATTGGTT 269984 36 100.0 33 .................................... CACAAATACTGCCTCCATAAAGTGCATCGCAAT 270053 36 100.0 33 .................................... ATACTGAATGACTCTAGGTAGTCACACTTATTG 270122 36 100.0 33 .................................... TTGTTGAGTAGCTTCTTCTTTTTGCTCGATAAT 270191 36 86.1 0 .............................ACG..GA | T [270218] ========== ====== ====== ====== ==================================== ================================== ================== 10 36 98.6 33 GTCTGAAACACTCCCTGATTCGTAAGGGATTAAGAC # Left flank : CAGCTACAGTATTCTCTCTATTATGGCAGCATGACGACTAAACGCATGGATAGTTTTATAATTGCAATGCAGAGGGTTATTCATCCTAACGAGGATGATCTGCGTATATATGAAGTTGAGCCACTTGAGAAATCGTTTGTCATCGGCAAACGTGATGATGATATTATGCTGTTTAGTGATATAAGAGAAATGACACTATAATAATGAACGCCTGACACCCTGATAACGTCGCTTTATCATCTTGCACTTATCTGGCACATCCATTATGATTAACCGGTGAGTTTAAAACTCTCACATCCTAAGCAATTAGGCATGGTTTCAGACGCTATCTGACGAAGATACTGGTCATTATTTAAAATTTCAGACGCATAATTGGTTATTATTTAGTCAATTTTTAGTAAAAAATTGATCAAAAAAGCATCAACTTTTAAGCTGACTTTTGTTGGTTAATTGAATTAATGTAAGTTATTGATTTTATTGATAATAAAAATCGTTGTACA # Right flank : AAGTAACGAAACACTGTTTCGTCCGAGTGCAAGAGAATTTACATTTTCGTAAATTCTGTCCAACTAGCTACAACAGTCTGAACAGAAAACCCTAACTTCCTATAAAATCTTGCAAAAAAGCCGTCTACCAGTGCGAACTGATAGACGGCTTTTTTGTTGTGCTCAATTTATGCATTGTTCGCAAGCTTGTCATTTTATGAGATGTCGTACAAAAGAGCTGATAATCAACTCAACACATCAAACAACCTCCATAAGAGTAATGACTATGAAGAACCAACTTCAGCTTCAGATTGACAGTGCTAGCGAGTCTATGAATGACGGTTTCGTTGATTACTATAAGAACATGGTGAGCTACTTTCATCAAAACCATGCTCAGAATCTAAGCTATGGTGATTTTTCTAGTCGCACTAATAGAGCGACAAATGCGCTCATCTCGGAAAAAGAAGCCATATTTTATATTGTCGCTTATGGCTGGCAGCATCACCAAAGCATGCAGCACC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACACTCCCTGATTCGTAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //