Array 1 811280-806200 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033719.1 Propionibacterium acidifaciens strain FDAARGOS_576 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 811279 36 100.0 36 .................................... GCGTACTCGCTGAGTTCCACGGTCACCACCGTCCAA 811207 36 100.0 35 .................................... TTGTTCCCATTCCAGAGAATCGCGTTTCTTCGCGG 811136 36 100.0 35 .................................... GGTAATCGTATCGGTACATGATGAGTCCTTTCTCT 811065 36 100.0 37 .................................... GCGCCGTTCCCGTTCGACCTGGTCGAGTTCGGCCACG 810992 36 100.0 38 .................................... AGCTCATAGATGAACTTCGCCTTGTCGGCGTACTGCTG 810918 36 100.0 36 .................................... CTGGTGAAGCGGTCGATGGTGATGTTGTTGTCTCGG 810846 36 100.0 35 .................................... CGGGCGGGGTAGTCTGCCTCGTCGACGAGTTCCCA 810775 36 100.0 37 .................................... GTGAGGGTGATGGTGACGGCGCCGTCCTGGACGGCGG 810702 36 100.0 36 .................................... CTGTGTCCGAGAAGTATGCTGCGGCGGCGCAGGCGC 810630 36 100.0 36 .................................... AGCATGGACGATGACAGAATTGTCACTGCAACCCGG 810558 36 100.0 36 .................................... GTTGTACTTTACCCTGGTGGCCGCCGGCAACTTCAT 810486 36 100.0 34 .................................... ATCTCGCCGGGAGGACCGAAGATGGAGTCCTCGA 810416 36 100.0 35 .................................... TGCAAGACCGACGGGGAGACCGTCCGGGACGGTAC 810345 36 100.0 37 .................................... AACCAGACCATGAACAGGGCGCCCCTCTTCGCCACGA 810272 36 100.0 37 .................................... TCCCATACGGCGAGCCCGGGGGCGGCGGCGGTGACGA 810199 36 100.0 35 .................................... AGGCGGGCGGCCCGCGGGTCGAGGGCGGCGTCTTC 810128 36 100.0 35 .................................... TCTCTGGGGGGGCGCATACGAGGGGCCCCGTAGAC 810057 36 100.0 36 .................................... GCTCTTTTCCTGTGGGGGCGGTCAGATGCGGGCCCA 809985 36 100.0 35 .................................... TCGTCGGTGACGACGCATGGCGCTTTGTTGTCCCA 809914 36 100.0 35 .................................... CCGATGGCTGCTGCCGGCCCGTCCCCTCCTCCCGG 809843 36 100.0 36 .................................... GCGGAGGATCTTCTCGGCCACACCCGCCTCGCCCCG 809771 36 100.0 37 .................................... TGGCGTTGTTGGCGGTCGGGCTGTAGTGGACGTCCTT 809698 36 100.0 38 .................................... AGCTCTCGTGGGATGCAGAAGTCCTCGATCAGCTGGTT 809624 36 100.0 35 .................................... AAACTTCTCAATGGGTACTGCGATGGCAACTATTC 809553 36 100.0 36 .................................... GATGCTGTCGCAATGACGGTTCCATGTGCGATGGGC 809481 36 100.0 35 .................................... ATCGTCCTGATCCTGGCCATCGGTCAGCCCTCCTC 809410 36 100.0 37 .................................... TCCTCTGGGGGTGCGCTGGGGGTGCAAGGGTGCGCTG 809337 36 100.0 35 .................................... GTCTTGAGTCCCGCATCCGCGATGCTTGGGCCGAC 809266 36 100.0 38 .................................... CTGTCCGATGACCTGTGCCTTGAGCTTCGCAACCCCCC 809192 36 100.0 36 .................................... GACACGAAGGTGTACCGGAGCGGGGATGACCTGTAC 809120 36 100.0 36 .................................... TCCCTGGACTCGATGATGAGCCTGATGGCGTCCCGG 809048 36 100.0 36 .................................... AACAGATCATCGTCGGCGTTGCGAAGAAACATTCGC 808976 36 100.0 38 .................................... GGGCGTGTCGTGCTCAAACGGTTCACGGCTCCGGACGG 808902 36 100.0 36 .................................... GAGACGGTCTGGTCACCGCTGGAGGACGAGACGCTG 808830 36 100.0 38 .................................... GAGATCGAGGGGCTGCCGATCATCCGGGACGGCAGCCG 808756 36 100.0 35 .................................... TGCATCCCCCGAGAGCTCGAGAGCATCGCGCGGAA 808685 36 100.0 36 .................................... AATATGACGTCCACACCATCTGGCATGTCATCACGG 808613 36 100.0 35 .................................... GGCCAAGTGAAGACGACGTCGCCCGTCGGGCCCGC 808542 36 100.0 36 .................................... AATATGACGTCCACACCATCTGGCATGTCATCACGG 808470 36 100.0 35 .................................... GGCCAAGTGAAGACGACGTCGCCCGTCGGGCCCGC 808399 36 100.0 36 .................................... TTCCCGAGGTTGTGGGCGTCGTACTGGCGTGCGTGG 808327 36 100.0 36 .................................... ACGAACGTGCAGCAGGCGATCAAGGCGCTCGGTCCG 808255 36 100.0 35 .................................... CAGTGCGGGTTGACCGTCCCCAGGCAGAACGGGAA 808184 36 100.0 35 .................................... GAGGAAATGGAGACCGGAGGCTTCGGGGCCTCGAA 808113 36 100.0 36 .................................... TGCATCCCCAGAGAGCTCGAGAGCATCGCGCGGAAG 808041 36 100.0 37 .................................... GACAACATCTGACTCGCCAGATTACGAGACCAGTTGG 807968 36 100.0 37 .................................... CCGATGGGGTGTTCGCGAATTGGGGCGACGCCTACAG 807895 36 100.0 36 .................................... GCCTTCTCGACGGGAAGCCCAGAGGAAATGCGGGAC 807823 36 100.0 36 .................................... TCCTGGGTCGAGGCTCTGCTCAGCTGGGCTGAGGAG 807751 36 100.0 38 .................................... CTTATCGCGATGCTGGTGCCAGCGCGGCTGGCCGTGAC 807677 36 100.0 36 .................................... CACCGCCGCGCGGAATATCCTTTTTGCATTGTCCGG 807605 36 100.0 36 .................................... CACCGCCGCGCGGAATATCCTTTTTGCATTGTCCGG 807533 36 100.0 35 .................................... ACGTCAGGCGCAACAAACAGGTTCAGGGCGACCTT 807462 36 100.0 35 .................................... GTTTTGGTCGGTGACTGTTTTTCCCTCTTGTCCTG 807391 36 100.0 37 .................................... ATTGTAAGGCCAATGAGTGGGTCGGCTCAAAAGTAGG 807318 36 100.0 37 .................................... ACGAATTATGGCGAGCTCTGCGAGCCGGCCGTGGCAT 807245 36 100.0 35 .................................... GCCTGACTGACGTCCGCCCGCATGCGCGTGGCCAC 807174 36 100.0 35 .................................... TCCCCGGTGGACTTCTTCGCCGCCCGCATCAGCCC 807103 36 100.0 39 .................................... CCGTCGTAGTGCTGGTAGATGCGGCAGTAGACGGAGCGG 807028 36 100.0 36 .................................... GTGTAGGCCAGCAGGATCGCCGGGTCAATACCGCAG 806956 36 100.0 35 .................................... ACCCAAATGATATCCGTAGCGTTACCCGCATCCGC 806885 36 100.0 36 .................................... GGCTGCCTCGTGGGCGGCCCCTGCCACGGCAGCCGT 806813 36 100.0 37 .................................... GCACTCATAATCATGATCTCATTCCTCTCTCATCCGG 806740 36 100.0 36 .................................... GGTCTCAGGCCGCGGCTGTAGTCCAGGCGTACGCCG 806668 36 100.0 37 .................................... GCCGCCCACTGAGGCCGGCACGCTGGGCCTGCTCGGT T [806647] 806594 36 100.0 36 .................................... GATGCCTCCAAGCTACGCGCCCTGAGCCCCTGTTCA 806522 36 100.0 36 .................................... CGGTTGAGGTCGACGTTCACCCGGACGGCCCCGTGC 806450 36 100.0 36 .................................... GCCATCATCGGCGGCGGCCTGTGGCTCGTGTGGGGC 806378 36 100.0 36 .................................... ACCGTCCCCCTACCCAAGACCGTGAACCCGCTCCGC 806306 36 100.0 35 .................................... CGTACGGTGCCGCCCTGGGGCTTCTGGGCGAGCAC 806235 36 97.2 0 .......T............................ | ========== ====== ====== ====== ==================================== ======================================= ================== 71 36 100.0 36 GTATTCCCGGTCTTCATGACCGGGCTCCATTGAGGC # Left flank : GACGACCTCGACTCGTCCCGGACCCTGCTCGTCGACGGCACCCTCGTGCCGTGCTGGAACTGGCGGGACCAGTCCGGCCTGTACTCGGGCAAGCACCACCGCACCGGCCTGAACCTCCAGGTCGCCTGCGACCTGGACGGTCGGCTGGTCTGGGTGTCCGACCCGGCCCCGGGCTCCACCCACGACGCGAAAGCCATCCGGCACACCGGCCTGCTCGACCACTTCCCCGACCCCCCGCCGATGGCCGACAAGGGCTACACCGGGCTGGGCATGATCACCCCGGAACGAAAACCTGCCGGCGGTGAACTCACAGAAACCCAGAAACAGTACAACAAGGCCATCAACACGCTACGCGCCCCGGGTGAACGAGCAATCGCCAACCTCAAAACCTGGCGGACACTCCACACCGGCTACCGAAGACCCCTGCACACCTTCCCCGAAACCATCACGGCCATCATCGCCCTAGAATTCTTCAAAAACAGTTTTGCATAACCCTCCAT # Right flank : TCCGAGGAGCCGGTCCTCGCGAGAGGCTCGGTGAAGGTATTCCCGGAGGATTATTCAAAAGTATTTTTTGGTTTCTTGTGGCTATGGCTGGCATGAAACGAAACCGTATTTTTCGTGGATTTCCTGTGCCGTTTCGGATATGATCGAGGCATGCAGGTCGGGGTCACCCCGGAAGAAACAGCCGTCCTGATCAGGTGGAAGAAGCGTTCCGACAATCATGTGCTGGTGCGGACGAAAGCAGAAGCGATCCTGTACGCCTCCGAAGGAGTCAGTATCAGCATCATCGCGAAGATGGTCGAGCGGGCCGAGAGGACCGCACAGGAATGGCCGGCCGACTGGCAGGCCACCAGGATGTGTTCGGTCCTGACCGGGCACGCCGGGAACCAGAACGCGGCGAAACCCACCCGCACCCAGAAGGAAGAACTCAAGAAAATCCTCGCCCAGCCGCCCTCCTAGGCGGGCGTCCACGCCGAGTTCTGGGACGTCCCGGCGATACGTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCGGTCTTCATGACCGGGCTCCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.80,-13.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 812219-817632 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033719.1 Propionibacterium acidifaciens strain FDAARGOS_576 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 812219 36 100.0 35 .................................... TTGAAGCCGTCCTGAACACGGACATGGCGGACTAC 812290 36 100.0 35 .................................... GCGCACCCTTGCACCCCCAGCGCACCCCCAGAGGA 812361 36 100.0 37 .................................... GCGCACCGGCGGGTACAGCCAGCTGGCGGTTCTGACG 812434 36 100.0 35 .................................... GCACCATCAGTTATGCGACCGGGAAGGATATTCCC 812505 36 100.0 36 .................................... GTCCAGAACCTGCGAGGTGTAGCCGAAGCCGCCGGC 812577 36 100.0 37 .................................... TGGGTCTTTCGGGTTGGGGTTGGCCGGCCGCTGGGGT 812650 36 100.0 35 .................................... TCGGCGTCGGCGATGCGGCGGGCGCGGATGCGGCG 812721 36 100.0 36 .................................... TCGACAGGCCATCACGGAGCTGACTGCTTCCATTGC 812793 36 100.0 36 .................................... CTGGTCGAAGATCCCGGTGGCGGCCTTCGGGGACTG 812865 36 100.0 36 .................................... TACGCCGGCGACGACCTCCCCGAACGGGGACGAGAC 812937 36 100.0 37 .................................... TCGGTGGTGTCCATGCCCCGCAGCCTAGCATCTGCTA 813010 36 100.0 35 .................................... ATGCCCGGTACGGTGGACGACATCGTGTACGAGGA 813081 36 100.0 36 .................................... CCGCACTCCCGGCTGATCATCCAGTCTCAACAGAAA 813153 36 100.0 37 .................................... CGGCCTGCTCGGCGAGCATGCCCCACTCGGCCGGGCT 813226 36 100.0 35 .................................... GTCGGGAGCACCCGTCAGGGTGCGACCGTATGTAA 813297 36 100.0 36 .................................... CACCTGCCCCGACACCGTCGCATACGGCCAGACGAA 813369 36 97.2 34 .....................A.............. ACGAGGGCATCCCCGTCGCCGTCGTCGACACGCC 813439 36 100.0 36 .................................... CTGCGCCGCCTGCACGCGCGCGAACAGGCGCGACGC 813511 36 100.0 36 .................................... GCACATCCTCGGCGCCGGACGCCAGACCATCGACCG 813583 36 100.0 35 .................................... CCGGAACAGGGGAACAGGGGAACAGGGGAACAGGG 813654 36 100.0 35 .................................... TGGCCGATCTCGGTACGCGCGGCACGGCGCGTCTG 813725 36 100.0 37 .................................... CCGCGCTGCGAGAAGCGTTGGAGCGGATCCTTGACCG 813798 36 100.0 37 .................................... GTGACAATCGTTCGTATGTGAGCTACAACAGCTTCTA 813871 36 100.0 38 .................................... GGGCTGCGGGGGTGTGCGGTACGGAGGCGCTCCCAGGA 813945 36 100.0 38 .................................... GCCGGAGTGGCTGCTGGCCTTGGCATCGGGTACGGCGT 814019 36 100.0 37 .................................... CTCCACGTCTGCCAGCGTACAGGCCTCGACCCCTGGG 814092 36 100.0 36 .................................... ATCGAGGAGGCATGATCGTGACCAGCCAGCTCGCAG 814164 36 100.0 38 .................................... TGGCCGCCCCGCCGCGAGGACCGGGACATGACCATCAT 814238 36 100.0 36 .................................... CAGCAAAACCCCGTAGTGTCTAAGACACACCGGGAA 814310 36 100.0 37 .................................... CACGAGCCGGCGAGGTCACCACCTCCACGCAGGCCGG 814383 36 100.0 37 .................................... CTACTTGACAAGCACAAACAAGACTTATCCACAGGCC 814456 36 100.0 38 .................................... CGCCGTGTCGGACAAGACGCCTGACACGAGAGAAAGGA 814530 36 100.0 36 .................................... CATCGCGTTCATCGCGGTCATTGTTCTGCTGTGGAA 814602 36 100.0 37 .................................... CGTCCGCTCAGGGCGGCACCGGCTACATCACCGACGG 814675 36 100.0 37 .................................... CGGGGATCAGGCGCGTGTCGGCGGTCTGGGACTGGCT 814748 36 100.0 37 .................................... CCGGCATCTCTTCCGGATCGGCGTCTGGCAGCAGCCT 814821 36 100.0 36 .................................... CGTGCCGAAGGAGGCGCTGGACCGTGTGGATGTGTC 814893 36 100.0 37 .................................... CGACTACCGAGGAATCACCCTACGCAACGAGGATGGT 814966 36 100.0 38 .................................... CGGGTATGCACCCAGTATATGCGTGTGTGTGTGTGTGG 815040 36 100.0 34 .................................... CATGCACCCAGTATATGCGTGTGTGTGTGTGTGG 815110 36 100.0 38 .................................... CGGGGTGCGGCTGCGGCGGATGTCGCGGAGGGCGCGGC 815184 36 100.0 37 .................................... CGGGGGCGTCACCGGTACGCCCAAACCATGTAAATTC 815257 36 100.0 38 .................................... CGCCCGCCCGACGCGCCGAGCCCGTCAAGCATCGTGAT 815331 36 100.0 37 .................................... CCAGCGAGATCGTCAACGACACGGACGGTCTACTCGT 815404 36 100.0 37 .................................... CATGACCACCCACACCACCATCGAGCAGATCGCAGAG 815477 36 100.0 38 .................................... CCGCCATGGGGCCGCAGTGGGCATGTCACAGTGCTGCG 815551 36 100.0 38 .................................... CGCCCGCCCGACGCGCCGAGCCCGTCAAGCATCGTGAT 815625 36 100.0 37 .................................... CCAGCGAGATCGTCAACGACACGGACGGTCTACTCGT 815698 36 100.0 37 .................................... CATGACCACCCACACCACCATCGAGCAGATCGCAGAG 815771 36 100.0 38 .................................... CCGCCATGGGGCCGCAGTGGGCATGTCACAGTGCTGCG 815845 36 100.0 38 .................................... CCCGGCGAAACCCCGTAGCATGTGAGACACGCCGAGAA 815919 36 100.0 37 .................................... CCTTCTTGTCCGGCATCTGCCACGCGTTGCACGGCAG 815992 36 100.0 38 .................................... CCACCGACAGGAGACACCATGCCGATTAGCACCACCAT 816066 36 100.0 37 .................................... CCTGTCGTCCTCGTGGGTCATCGACCCGGCCAAGCAG 816139 36 100.0 38 .................................... CGCAGCTGTAAGACAGGGATGCCGGACGAGGTGAGCTG 816213 36 100.0 36 .................................... CGGGTCCTCGACGCCGTATGCGCCAGCACAGACCCC 816285 36 100.0 37 .................................... CCAGCCCCTGCCGGTCACCGTCGAGCCCGGTCGAGAT 816358 36 100.0 36 .................................... CGGGTCCTCGACGCCGTATGCGCCAGCACAGACCCC 816430 36 100.0 37 .................................... CCAGCCCCTGCCGGTCACCGTCGAGCCCGGTCGAGAT 816503 36 100.0 37 .................................... CGTCTGGGAGCGGGACCTCGCCGACATCACCGACGGC 816576 36 100.0 37 .................................... CCGGCGGAACACCCACCAACACCAACAAAAGGGAGGC 816649 36 100.0 38 .................................... CCGACGTCCAGGTAGCGGCTGTTCCAGCCGGGCGGCGT 816723 36 100.0 38 .................................... CCCGCCGCAGCCGCCTTCGTCGAGGCAGGGATCGCATT 816797 36 100.0 36 .................................... CGTCCGCACATAGCAAGCCTCGCACAGCGCCGGGTA 816869 36 100.0 36 .................................... CGGGTCCTCGACGCCGTATGCGCTAGTACAGACCCT 816941 36 100.0 36 .................................... CCCGCTGACGTCCATGTTGGCTTCTACCGCCTCGCG 817013 36 100.0 38 .................................... CCACGCGTCGAAGCGGCATCCTGCCACGTCAGCTGCAC 817087 36 100.0 37 .................................... CGACGGCGCAGGGGGCGTTGAACGCTGTGATGTCGAT 817160 36 100.0 37 .................................... CCCGACAGGAGTCAGAGATGACCATCCACACCACGGA 817233 36 100.0 37 .................................... CGTCGGGGACGGCATCCTCCTCGTCTGGATCGCCCCA 817306 36 100.0 37 .................................... CCGGCGTCCGCCGCGTGTCGGCCATCTGGGACTGGCT 817379 36 100.0 36 .................................... CGGGGAATACTGAGAAAGGACCCACGCCATGGCATT 817451 36 100.0 37 .................................... CGAGTTGCCGGTAAGTGCGGCGTAGGCGGGGGGTGGA 817524 36 100.0 37 .................................... CCGCCCACAGACGTCTCTGTACCGTCAGGCCTAGTCA 817597 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 75 36 100.0 37 GCCTCAATGGAGCCCGGTCATGAAGACCGGGAATAC # Left flank : AGTTCCAGCACGGCACGAGGGTGCCGTCGACGAGCAGGGTCCGGGACGAGTCGAGGTCGTCCACGGTGGGGATGAAGTCCTCGAGGGCTTCGGCCAAGCGGGGCGTCCACCGGCAGATGGCCCGGGAGACGGAGGACTGGTCCACGTCGAAGGACTCGGCGAGCTCGGCCTGGGTGCGGTTACGTCGGTGATAGACGAGGGTGAGTCTGATTTCCTGTTCGGTGGTCAGCGCCCGGGGCCTGCCTGTTCTCTGCGGGGGACGAGGGTGGGTCTCGATGAGGATCGTGCACAAGGCTGCCATTGCGGCCGCGGAGAAACCTGTTGTATGATACACGTGAGGACCTGTTTTGAGATTTTCGGCCATTGGTTGCTTTATTGTCTCAGGGCAGGTCCTCATTGTCTGTTCCGACACGCCCGGGAGCGGGAATCACCGAAGATTAAAATCAGGAGTTTTGCATAACCCTCATGGAGCAGGCACCTGATGGAGCAGGCACCTGATG # Right flank : CCGGCTCGCTTGCTTCGGTGCCGTTGGCTACCAGTGTTGCACACTCTTGCGAGGACTGCCACTCGGCACCCCCAGCCGATGGGAGGGAGCGCCGGCAGGGTAGACAAGAACCAGCCCTGACTAGGGCGCGAGCACTGTCGGGTGACCCAATCGGCACCAGAGCGCTCGCTAGACAATCTGGGATCCTCTCGTGGGGAGCTGCCTGCGGTGTCCGACGAACGTGAACCGGTCCCCGCTGGGGTCACCCAAGTCGACGATCACCACCGAGTCCACAGCCAAGTTCATGATATCCTCACCATCCGCACGCAGATGAATGAGTTCAGTCCTGTTCAAGTCGCAAACGAAAACAGAGTACTGGAGACGTTCACCGTTGGCCTCCATCAACTTGCAGATTCGACGAAGTCGCGCCGGATCACGAATATCATAGGCGATCAGGTATCTTCTTCTGTTCGTCCTCATCTGGTCATCATCGCCGTGTACTGATCGAGCTCTCCAAGCAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGAGCCCGGTCATGAAGACCGGGAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.80,-13.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 3 1767666-1767922 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033719.1 Propionibacterium acidifaciens strain FDAARGOS_576 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1767666 29 79.3 21 ..A.GGG...................CG. ATCTTCCGGAGGGACGAGGGT 1767716 28 89.7 29 ...T..G.-.................... CCAGCTCCTGAAGCGCCGGCCCCGCCTGC 1767773 29 89.7 32 ..........................CCG ATCTGAAAGCGATGGTGTAGCCGTGTGGCCGT 1767834 29 100.0 32 ............................. GCCGCTGATCTGGGAGCAGGGCATTGACCGGT 1767895 28 75.9 0 ........-...C....A..A.....CGT | ========== ====== ====== ====== ============================= ================================ ================== 5 29 86.9 29 GCTCCCCCCGGGTGGACGGGGATGCCTAC # Left flank : CTACCCCATCGACTTCCTGCCCAACGGGGTGCGGCTCACCGCCTACTCGGGCGAGGCCGCCGACCTGCCCGCCGAGGTGCTCCAGCGCTTCCTCGATGACGTCGCGGCGGGCCGGGTGCGCGTGCCGATCGGGCGGGTCATGGGGTTGGACGAGGTGCCGGCGGCCCACCAGCTGCTCGAGGACGGCGCCGCCGGCGGGAAGATCGTCATCGTCGTCTGACCCCGGCCCGCCGCGCCTCCCTCCGCGATCACGGCTCTCCCGTCTCCCGGTCCCGGCGTCCCCTTCTCGCCCCGTTCTCCCGCCCCGTTCGCACCGCACCTCCCGTCCTCCCGCTCCCGCCTCACTTTCGGTCCCCTGCGTTCGCACCGCACTTTTACGCCGACACCCGGGATATGTCCGAGGTGCGAGCGCAAGAGTGAGGCGGGGGCACGAATGTAGAGGTGCGAGCGGCAGGGCGACGTGCATCGCGCCTCCAGGCCGAACGCTCCGCAGACGACCG # Right flank : TGCCTGCCGAACGGCCCCGGGCCCGTAGGCTTGGGCCATGAGTGAGCGCAAGAGTGTTCTGGTCACCGGTGCGACCCGCGGCATCGGCCGCGCGATCGCCGAGGAGCTGGCCGGCGACTGGCACGTCGTCGTCGGCGGGAGGCGCCCCGATGCGGTGCACGCCCTGGTCGAGTCCCTGCCCAGCGCCGAACCCTTCATCGCCGACGTGCTCGACGGCGACGCCCTCGTCGCGGCCGCCGCGCCCATCACCGAGCTCGATGCCCTCGTCCCGTGCGCCGGGCAGACCACGCTCGGGCGCATCGCCGAGCTCACCCCCGAGCAGTGGCGCGCCGAGTTCGAGCTCAACGTCATCGCCCCGGCCCAGCTGACCCGCCTCCTCCTGCCGGCCCTGCGCGCCCGCAGCGGCCACGTCGTCTTCATCAACTCCGGCGGCGGCTTCCACACCCGCGGCAACGACGCCTGCTACTCGGCGTCCAAGCGCGCCCTCATCGCCGTCGCCG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.35, 5:-1.5, 6:0.25, 7:-0.22, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCCCCCCGGGTGGACGGGGATGCCTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [2,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGGGCGGGGATGAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [3-3] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [25.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //