Array 1 23230-25738 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNXF01000030.1 Halanaerobium congolense strain MSL44.2 Ga0213560_130, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 23230 37 100.0 36 ..................................... TATATATTATCTATTGCTAAAAGATTGAATTATTCT 23303 37 100.0 35 ..................................... AATGGTCTGAAGTTGATGAACCAGACATATTAGGT 23375 37 100.0 36 ..................................... TGTAAAATTTTCTGATGATAACATAGACTGGTCTGA 23448 37 100.0 36 ..................................... GATGCTGAAAAACTAGAGACATCAGGCACTCCAACT 23521 37 100.0 35 ..................................... CTGCATATCAGCTTCAGGACAAGCTGAGAATAATG 23593 37 100.0 38 ..................................... TTCTAACATTTCACCACCTCAATTAAAAAGGGCCAGCA 23668 37 100.0 36 ..................................... CAAAAGCTGCTGAAAAAGGGCTTTGGAAAGGCATGG 23741 37 100.0 34 ..................................... GGAGATATGGCTTATCAAGATGTTGTTGAACTAG 23812 37 100.0 39 ..................................... TGGTGACGGATTATTGGCCGGAGAGGCAGGGGCTGAACA 23888 37 100.0 35 ..................................... GTTTCTTCTTTTTGTTCTCTGATGAATTGTTCTTT 23960 37 100.0 36 ..................................... TCTTTTATTAATTGTTTCATAAACTCCTGAAATTTA 24033 37 100.0 34 ..................................... AAATTGCCATCAACTTGACCTGTCATAAAGCTAT 24104 37 100.0 36 ..................................... TTAAATGCACTTTGCAAGTGGTTATTATGATGACAA 24177 37 100.0 35 ..................................... CCCTTTAGCATTAAGTATCTTCTTCATAGGATTGA 24249 37 100.0 36 ..................................... AGCAAGCCAGATGATTGGCAAGTATATGAAGTAGAT 24322 37 100.0 37 ..................................... TTTTCAGACTAACAAAAATCCATTTGAAATAGCTAGG 24396 37 100.0 35 ..................................... TCCATCTTCTTCACCTTCAACTTTTCTCACAATTG 24468 37 100.0 36 ..................................... AATAGTATAGGGTATGCGATAAATAAACAAGAGGGT 24541 37 100.0 37 ..................................... TAATATTTAATATCATTCCCATTAAAACTTTTGAAAT 24615 37 100.0 36 ..................................... AGTCGAATATAGTGAAATGGAGGGATAAGATGAAAA 24688 37 100.0 34 ..................................... TTGAAGAAACTGGTAGGTATAGAAAATATGAGAG 24759 37 100.0 34 ..................................... CTGCTAAAAAAGCTAAATATTGGACATCAACATT 24830 37 100.0 36 ..................................... TTGTGGGAAATGTAGCGGACAACTATTCCGAAAATT 24903 37 100.0 35 ..................................... GGTGATGGCGCTTATGGCCCGCAATACGGTGATGA 24975 37 100.0 36 ..................................... GTTTCGCAGTCTAACCTAAGTTTCTTAGGTTTCCCT 25048 37 100.0 35 ..................................... ATTCATCTACCATAGCATATATACTCATTGCTTTG 25120 37 100.0 36 ..................................... TTTTCAGCAAACATGGTGCTAGAGGTTCAAAACGAT 25193 37 100.0 36 ..................................... ATTATCAGTATATTTCAAAAAGGAGATGAAAATTTT 25266 37 100.0 35 ..................................... TAATGTCATTATTCTACCACTATCATCCAAATAAA 25338 37 100.0 35 ..................................... GCTTCTAGTTTAGCAATTGGACTTCCTAATTCTGT 25410 37 100.0 35 ..................................... TACCAGATGAACCTATTATACCACCACTATCTCCT 25482 37 100.0 36 ..................................... CCTTTTCAACTTCTCCCTGCTCATTTTCTTCTTCAA 25555 37 100.0 36 ..................................... TCTCAGGGCTATCTTTTGAACAGGCTGTAAAGCATA 25628 37 100.0 37 ..................................... ATAATGTTAGACCAAAGGGAGAGAGATTAAAGACTTT 25702 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 35 37 100.0 36 GTTCCAGTGACTGATCCACTAAAATAAGGATTGAAAC # Left flank : TTCTTAAAACGGTTAATCATTGGTAATATACTTAGCTTTGCAAAAGGAATAGACTGGTGGATTGAAGAAGAAATAGTTATAGAAGCAAAATTAGAGGAGATTTCAGTTAAATTCAAAAATGAAGCAATGATTGGTTTTAAAGGTTACTTTTACAGCAATATTTATTTACCTGAATTTATAGGATTAGGAAAATCGACTAGTAGAGGTTTTGGGACAATAAGTAGAGAAGAAATTCTTGATTGAGCTTGTTTTAAGACTGAAAATTTTATAAAATATAACTAAGAAAGAGAAAAAATTATAAATTCTGAGGCAAAATTATTTTGCTTGAGAATATTGAACCTTGACAATCCAATAGATGCCAGTTTGGTCAGGATAGTCAAAGTCGCGGCATTTGGTGTTAATTTAACTATTTTTTTAGATTTAGTTGGGAAAATGGTTAGAAAAAAATCTAGAAGAATTGCTATAATGACTGTTATAAAAGTTAATTTGAATTATATCGG # Right flank : CTAATTTATGATAACGTCAAATAAAATATGATAGTTACCATAAAATGTAAGTAAATAGTAATAGATCACCACTAATTTTAATTATAATAAAAATCTTCAGAATGTCAAAAGTTTGAAGATGTAAATTATGCTAAAAAATGGAATTAGATAAATATAGAACTCTAAAAGAATTAAGCAAGATTTTTTGAAAAGTTACTCAGTAAAGATATTTAGTTACTTATCAGTTTTGTTGATCCACCTGATAAGTTGAGCCCAGGATTCAATGGGCTGACCTCTTGAATCTTCAACTACTAGAGGAGCTTTGTTATCAAAAGAGCTATGAGGTTTTATATAGTTAAAATATAGCTGATATAAAGTTATATGAGCAAGAGCACCATCAAAGGAACTAAAGCTTTTATGACGCTTGTAATGAGCTTTATAGGTGCCAAAGAAACGCTCAATGATGTTTTTATAGGGTCTGTAAACCTCATCTGAATTATCATCATCAGTAAAAAGTCCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGTGACTGATCCACTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 2321-2503 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNXF01000032.1 Halanaerobium congolense strain MSL44.2 Ga0213560_132, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2321 37 100.0 35 ..................................... GTAGTTTTGCCAGCTTAGAAGGAATTGCAACCACC 2393 37 100.0 37 ..................................... AACTAACATCTGAAACTAATCCCTGCATCGTTTCGGG 2467 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 3 37 100.0 36 GTTCCAGTGACTGATCCACTAAAATAAGGATTGAAAC # Left flank : GACATTCACAGAGCTCCACATTTAGAGCATCCATCAACATCTACAGTTAGTGGTTTGCGGCGATTAACAGCTTTAATTGGTTCACCATTTTCTTTAGCTTCAGCCAGAATCTCCTGGTAATCAGGATTATTGTGTTCAATATCAGGCAGTGGATCATCAAAACTGTTAAATTTAGTATAGCTGTCATCAAGTTTTTCTTTGGGTTCAAAATCAACATGGAAAAGTTTTGAGAAAAAGAGATAAACCAAAAGAACAAAATTCATAAGAGGTTTAAGCAGGAAATTAGGTAAATTTCGAGAAATCATAACTTAGGATCCCTTCCTTTCTGGGTTAGTAAGTTGTGGTTCTCTCAATTACTATTTACGAGCTCAGGGGAGGGGATTCCTGCATTTTATGCAAATTCCTAACCTGACAACTATGATAACTATTAATATTTTTGAAAAAACTATTAGATTTGACGTAACGTAATTTATAAAGGGGGTGAAATTATGAAAGGTCTT # Right flank : CTATCTACGCAAGCGCAGGAGAATCCAAAAGAATCTGTTCCAGTTGTATATGATAATATACAGAGTTTAGAATTTGGTTGACATTGAATTCTAAAAGAACTGTAAAATTTTAAGAAAATAAAGGAAGACTACGGGATATCTATACCCAATTTTAATAGTGATTTTTACCATAATAACAAAAAATAGATTTTTTAAAAAATTAAACTCAAAAATCTATTTTAAAATCTTAAATCAGATAATTTTAGAGTTAAATCAAAGGAGAATTATATTTTGTGGCTGCTATGAATAATTTAGGATTATGACTTTTAATTAATGAAAGGAGCAGAAAAATGAGTATTGGAATTATAACTGATAGTACCTGTGATCTAAATCAAAAATTAATAGAAAAATATAATATTGAGGTTATCCCTCTATCAGTACATTTTGGAGAAAAAGAATTTAAAGATGGTGTTGATATCAATCCAAAAAGTTTTTTTAAAAAGCTGAATAAAAATAAAGAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGTGACTGATCCACTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA //