Array 1 285909-288779 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNI01000004.1 Deinococcus sp. YIM 77859 EI73DRAFT_scf7180000000011_quiver_dupTrim_4943.4_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 285909 37 100.0 35 ..................................... GTCAGACCCTCAAAGGCCCGCTCCCACGCGGCCCG 285981 37 100.0 35 ..................................... GCGACCTGCTCGCGGCCCTGATGGCGCATGCCCAG 286053 37 100.0 35 ..................................... TGGAGGTTGGCACAGATGGCGGTGAGCACGTCAGA 286125 37 100.0 34 ..................................... AGAGGCGAGGAATCAGCGTGGTGGCGGTTGACCC 286196 37 100.0 37 ..................................... TGAGCAACTCGACCGGGTACGCCCTGTACGTGGAGAC 286270 37 100.0 35 ..................................... AGCCCCGACTGGAGCGCGGTGAGGTCGGCCACCTC 286342 37 100.0 35 ..................................... GCTGAGACGGACCTGCACAAGGTGACGGGCGCGGT 286414 37 100.0 37 ..................................... GGCCTCAGCACACTGCGGAGGGTTTGCGCGACCATGC 286488 37 100.0 34 ..................................... CGGAGGATGGTTTTAGGTGGGCAGTGCCTCACCG 286559 37 100.0 35 ..................................... GCTGCTCGGGCAGCAGCACGGGCGCGGCGAGGGCG 286631 37 100.0 36 ..................................... TGGTAGACAGCACCCGCTGCCTCTTCCGCCACAGCG 286704 37 100.0 35 ..................................... GCCTGAACGAACACGACCGCGCGCTGACCCAGCGC 286776 37 100.0 36 ..................................... AGCCCGTACTCGATGAGCTGCTGCGGGCTGGGAAAA 286849 37 100.0 38 ..................................... AACCGGCTGATCAAGGAGCTGCTGAAGGCAGAGGACAC 286924 37 100.0 35 ..................................... TGGGAAGCTGGCGGGACTGCGCGGCGTTGGCGAGC 286996 37 100.0 36 ..................................... CTGTCCTGGGAGGCGGTGCCCGGCGCCAGTCAGTAC 287069 37 100.0 38 ..................................... CCGACGCCACGCTGCTGCGGCGGGTGGAGACCTCGCAG 287144 37 100.0 35 ..................................... GCCTGGCCGTACTGGATGGCAGCGGAGCAGCGGGT 287216 37 100.0 36 ..................................... ATAGTTAAGCACAGCGGGCGCAATATGTCACGCAAT 287289 37 100.0 35 ..................................... TGGCTACGGCTGGGGCGGGCACTCGCCGGGCAGCG 287361 37 100.0 36 ..................................... CGGCCCAGTCGGTCGCACCCTGCGGCGGGCTTGTCG 287434 37 100.0 35 ..................................... GTGCTGGAGCGGGAAGGCTGACCCGTGCAGGCGGC 287506 37 100.0 37 ..................................... TCCCGTGCCGTGTCGCCGCTGGAAACTGCACCAGCAG 287580 37 100.0 33 ..................................... CCGACCGGCGCGCGCGGGGGCAGGTGGGGGGGG 287650 37 100.0 38 ..................................... GCTAGGCTGCCCCTCAGCCCGGCGGATTTCCTCGCCGC 287725 37 100.0 37 ..................................... ACACTCACACCGATGTTTTGGGGGCCTGGGGACAGAA 287799 37 100.0 36 ..................................... CATCGCGGGCTTTGCGCGCCTCACCACGACCTTCAG 287872 37 100.0 36 ..................................... GTATGGGGCCGCTTGTCAAAGAGCTTATGTTGGCGT 287945 37 100.0 36 ..................................... CATCGCGGGCTTTGCGCGCCTCACCACGACCTTCAG 288018 37 100.0 37 ..................................... AGGTTTCCTCCTAGCGTCACCGCCTCGGTGAGGAGCC 288092 37 100.0 38 ..................................... AGGCGCGGCTTTACCCAGGCCTGATACGCGTATTCCAG 288167 37 100.0 35 ..................................... CCGGAAAGCGTGCGCTGAAGAGGCGCGCGCGGCGG 288239 37 100.0 35 ..................................... ACCGTTCGCGCGCAGAGCACGCCCGCCCCGACGGT 288311 37 100.0 34 ..................................... GCGCGGCCTGTGCTTGGCGCGCGAAAAAAGTGAA 288382 37 100.0 34 ..................................... GCGCTGGTCACCTACAACGCGCGTCTCGGTCTGA 288453 37 100.0 36 ..................................... TAGCTCAACGCCAAGGGTACAGGCGGGGGGGAGGCG 288526 37 100.0 35 ..................................... GCCCCTGAATCATGCTCTGCTCGTCAATGGGCAGG 288598 37 100.0 37 ..................................... TGAGCAGGTCGTCCCGCATCGCGGCATCCACGCCGCT 288672 37 97.3 34 ....................................T CCATCGCGCAGGAGTTCGGGTTGCTGGGGACTGG 288743 37 97.3 0 .................C................... | ========== ====== ====== ====== ===================================== ====================================== ================== 40 37 99.9 36 GCTTCAATGACTTCCCCAAGCGATAGGGGACTGAAAG # Left flank : CCTGCTGGTGGAGGCTGAGCTGCACCTCACCTGTCCGCACGGCTACTGGCACAGCAGCCGCACACGCCAGACGCACACCATCCCCTTCGACACGCGTCTGCGCAACCGAACGCGGGCGACCATCGAGACGGTACGCCGCTTCATTCTGGACGAGCGCTGCCCGCCGCCCACAACCCAGACAGTAAAATGCCTGGAATGCGAGCTGCGGAACTTCTGCGGGGATACCCTATGACGCCGCAAGAGGCTGATCTGCTTCCAAAAGCCGCCGATTTGCGAGACGTGTGGGCGGCGCTTTCCGGGGCTTTCCAGGCAGTGGCTGATGCGTGTACCCCGCTCGGCAGAGGAAGAGGCGCTGGGAGCGGCTCGCAAACGGTGGGAATCGCAGCCGGGACCAGCGATTTGCGAAGCTGCCCGGCAAGCTATCCTGAATGCCGTAGCCACCGTGCTGCGCGACCCATGACAACCGATATGCCGAACGGCTCAGCCACCTGAAATAAGCA # Right flank : GAGCCGCAGCAGCGACGGCACGCGTGTGGCGCTGCAATATCTGTCCTCCTTCGCAGTGGGCTTTGACAAGGGTGCTGTCCACCGCCACCCCGTCCCAACCTGGCTTTCCCTCAGCATCAGCTTTCAGTTGTAGGACGACCAGAATCTCCGCTCCGTCCGTCCCATCCCCCAGCCTGCCAAATTCAGACAGATAGACCCTAGCTCACGTAAATGGCTCGGTAGTCGTTGAGGTTGTGCCCGCTGGGGCCGGTCACCAGGGCGTCACCCAGCGCGGCGAAGAAGGTGCCCGAGTCGTTGCGGGCCAGGAAGTCGCGCGGGTCGAGGCCCAGGGCACGGGCGCGTGCGAGCGAGTCCGGCGTGAGGAACGCCCCGGCGGCGTCGCTGTTGCCATCGATGCCGTCCGAACCCGCGCAGAGGGCATAGACGCCCCGTTCTCCCAGGTGCTGAAGGAGCCAGAGCGCAAACTCTTGGTTGCGCCCGCCGCGCCCCTCGCCGCGCAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGACTTCCCCAAGCGATAGGGGACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 415957-413610 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNI01000004.1 Deinococcus sp. YIM 77859 EI73DRAFT_scf7180000000011_quiver_dupTrim_4943.4_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 415956 29 100.0 32 ............................. AGGGCGGGGAGGTGGTGACGCTCATCCGACAC 415895 29 100.0 32 ............................. TCAATCGCCGCGCCGTAGGCGTGAACGCTCAC 415834 29 100.0 32 ............................. GTGACGGCCTGTGAGTTGTTCGGGCACGGCGG 415773 29 100.0 32 ............................. CTAAACGAGCAATGCCCCCACGCGGCTGGAAC 415712 29 100.0 32 ............................. GCGCCCGGCAACTCGGTTACTACGCGGTGCCC 415651 29 100.0 32 ............................. GCAGGGAGCGGGCATTTCCCGCTCCCTGCCGC 415590 29 100.0 32 ............................. GCGGTGCTGGCTGCCGAAACCGCCGCCTACCG 415529 29 100.0 32 ............................. GTGAAGAGCCTCTCCGATTTCCCTGCCCGCCA 415468 29 100.0 32 ............................. CCGCGATTCTCGCGGGCTACGCACCGAAAAAC 415407 29 100.0 32 ............................. GCGGTGCTGGCTGCCGAAACCGCCGCCTACCG 415346 29 100.0 32 ............................. GTGAAGAGCCTCTCCGATTTCCCTGCCCGCCA 415285 29 100.0 32 ............................. CCGCGATTCTCGCGGGCTACGCACCGAAAAAC 415224 29 100.0 32 ............................. GGGGTCTCCTCTCCGTGCGCCGCCCGTGGCGT 415163 29 100.0 32 ............................. ACGCGGCGGGCCGAGCCATTTCGGACGGCCTC 415102 29 100.0 32 ............................. GCCACGCAGCAGCTCCTGGGTGCGCTGGTAGG 415041 29 100.0 32 ............................. CGGCGCGCATCCGCGCCTGCTACCTGTCCAGC 414980 29 100.0 32 ............................. AGTCAGGAACAGGTGGCACTAGACAGCGGAAT 414919 29 100.0 32 ............................. TGAAATAATTTTCGGAACTTCCCCCAGAACGT 414858 29 100.0 32 ............................. CCGCTCAGCAGGTCGGCGCGGCTGTACTGGGC 414797 29 100.0 32 ............................. CACCGCACCCGCCCCAGCCTCCTCACGCCCCG 414736 29 100.0 32 ............................. CCAATGGTGCTGTAGCCAATCTCCAGTATGTT 414675 29 100.0 32 ............................. GGCATTAACCTCCAGCAGCACGTACGTTCCCG 414614 29 100.0 32 ............................. TACATCGCGGACGGGGCCGGGATCACCGTCGT 414553 29 100.0 32 ............................. AACAACACCACCCTGGGCATTTTCAACGGACA 414492 29 100.0 32 ............................. CAGGTCGAAAATCGGAACTGGGACGAGAGCAC 414431 29 96.6 32 ............................T GCCCGTGTCGCGGAACGCGTTTTCCTCGACCG 414370 29 100.0 32 ............................. GCCGAGGCGTGGGCGCGCTATCAGGGGATTGC 414309 29 100.0 32 ............................. GCCCACCCCCACCGGGCGAGACCATGCGTAGG 414248 29 100.0 32 ............................. AGCCCGCAGGTCGGTGGCCCCGCCGCGCACCA 414187 29 100.0 32 ............................. TATAACCTCCCTATTCCCTCCGCGCAAGAGGC 414126 29 100.0 32 ............................. CCCTTCTACGTGGGGGGGCGGTTGCTCGACCC 414065 29 100.0 32 ............................. CTCAGCCGCCGTCTCTGGGCGGGGCGGCGGCC 414004 29 100.0 32 ............................. TCGTCATCATCTCCGAGGTTCCCCAACATGAA 413943 29 100.0 32 ............................. CGAGTCGGCCAGCACGGTCGAACAGGCCGCGA 413882 29 100.0 32 ............................. AAAAAGAAGAAAAAGAAAAAATACATACCTAC 413821 29 100.0 32 ............................. CAGCGCCCCCTGCCCGTGCGGGTTGTGTGGGA 413760 29 100.0 32 ............................. AAGCAGAAGGGCCGCTGGCTGTGGCACCGCTT 413699 29 100.0 32 ............................. CGTGTTTTGGAAACGCGTGGGCGAAATCGCGG 413638 29 93.1 0 ..........................G.A | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.7 32 GTGTTCCCCACGCGGGTGGGGATGAACCG # Left flank : CCGTATGAGACAACAAAAGGCCAGGACAGGGGCTAGGCAGCCAGAGGGACGGATCATGGTGTCTCTCCCAGGCCGGGTCGGGCCGCGAAACAGGACATGACGGTCTGTCAGCGCCCAGGGACTGGGCACCGCAGGCATCAGATCCGGGGGGTGCGCTCGCCTCCAATTGGGATGGAGCGCGTGGCAGTGTCTGCATCGCGCTTTTTCGGCGCGACACCCAGATGCTGCCCGGCCGGAACGTCAAATTCGGTCGTTCCCTGAGCGTGAGGTATGGCCCTCACACGTCATCGGCACCAGGCTCGTTTTTCCCCACAGATCAGACGCTCCTGGGTTCAGCCCTTCGCGAGCCACCAAGACACCCCGCTGGCTGTACGTCACAAAGCTGGCGCGCTAGCTTGAAGCTGGTGTCACGCCGCGCTGCATGAAAAGTAAGCCAAGTAACATAGAGCCAAGGACCCTTCCGGGCTCATCAGGGGTGTAAAACAATGTGTTTCTGAAGT # Right flank : GGAGCTGATCAACCGCAGGGAACGAGGCACTCAGCGGTTGTACAAGGAGGCGCGCAGGATATCGGTGAGGTCCTCCGCGGTGGGCATTTTCGGCGCAACGGCAAGGAGCCGCTGCTGCTTTTGTGCTCCTGCCACCAGAGCAGGAAGGTCAGCCTCGCTGTAGCCAAGCTCGGCCACGCCGCTTGGTGCGCCCACATCCCGCATCAGGTCAAGCAGGGCGTTGGGGAGGGCCTCTCGATCTTCTGGAGTGTCATTCTGGCCAGTCAGCAACCTTGCAGCCTCTACATGCTTGGCAGGATGAGCGTCAAACGTGAAGCGGAAGGCGGCGGGAGCCGTGACGATCACACTGAAGCCGTGCGGCACAAACGCATGATCCTCCGGGTAGCCGGGCGCATGATAGGTGTGGCGTAACCCTGCGATGGGGTAGGCGCAGGCATGCGGAATGTGGACACCCGCCGAGCCGAAGCCCACCCCAGCCATCGTGGCTGACAGCATCATGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCGGGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 429104-430718 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNI01000004.1 Deinococcus sp. YIM 77859 EI73DRAFT_scf7180000000011_quiver_dupTrim_4943.4_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 429104 29 100.0 32 ............................. ACGGTGTCCCCCTCGCGTACTGGCGCGCCTAC 429165 29 100.0 32 ............................. GATGTGCGGGACTTCGAGCCACGCCCCTGGAT 429226 29 100.0 32 ............................. CCAAACGAAGATTGAGCCACCAGCCATTAGAT 429287 29 100.0 32 ............................. ACGCTCAGGTCCAGGTCCCGTTCCAGCAGGGA 429348 29 100.0 32 ............................. CACGCCGAACAGCCCGCGCGAGGAAACGAGGT 429409 29 100.0 32 ............................. GTAGCGGGCTGCCTTAGTGTCCCAGATGCTGC 429470 29 100.0 32 ............................. CATCGGTACGTCACGGGCGGCGACGAGGTGAC 429531 29 100.0 32 ............................. GCCCTCCGCGCGCTGCAGGCCCTCGACCCGGC 429592 29 100.0 32 ............................. ATGCTCCGCATTCAACCCGGGCACGCCATCAC 429653 29 100.0 32 ............................. CTCAGAGAGGCGCGGGACGGGTTTGTTCGGGC 429714 29 100.0 32 ............................. CACACACACGCGTGTGCATACACCCACATCTC 429775 29 100.0 32 ............................. AAAAGAGGTGCCCCCGGGTCAACCCCCACCGC 429836 29 100.0 32 ............................. CTCAGGGGCAAACCTTCCTGTCGCTTGCGGGC 429897 29 100.0 32 ............................. GTCCGCCGGGTGACCACCAGCGCGGGCAACAT 429958 29 100.0 32 ............................. CTTCGGCGCGGACGACGTTTTGTCCAGCTTGA 430019 29 93.1 32 ..A.....................A.... GCGGAGGAAATGGCCGTTTTGCCGCTTGTTTC 430080 29 93.1 32 ..A.....................A.... GCCCCGGCGATTTGCGCCGACGCCTCAAAGGC 430141 29 93.1 32 ..A.....................A.... GCGGTGTGGCTCAGCACGTAGCCCGGCGAGAG 430202 29 89.7 32 ..A.....................A...T GCGGGCGCTTTCCCGGCTGAGTGGCGTGCCCC 430263 29 93.1 32 ..A.....................A.... CACAGCGCGGCCCCCACGATTAGCCCCCACCG 430324 29 96.6 32 ........................A.... GCACAGGAGGTCGATGGCGATTCCGTCGACGT 430385 29 96.6 32 ........................A.... AGCGGCCAGAGCAGCGCGGAGGCCGCCAACGT 430446 29 96.6 32 ..A.......................... CCTGCCCCGGTGCTCCCCACCGGACAACGCGG 430507 29 100.0 32 ............................. TTGGGCGTCGCCCCGGAGATCATCCGCGAGGG 430568 29 96.6 32 ....G........................ GATGAATAAACGATAGGCGGATTAGGCAGAGG 430629 29 100.0 32 ............................. TTGGGCGTCGCCCCGGAGATCATCCGCGAGGG 430690 29 96.6 0 ....G........................ | ========== ====== ====== ====== ============================= ================================ ================== 27 29 98.0 32 GTGTTCCCCACACGGGTGGGGATGGACCG # Left flank : TCACGCTCCTTGACGACTGTGGCCCAGAAGACGACCCAGACAGCAACGATCCGGGCGACCTCTGGGATCCGGAGGGAAACGTTCAGGGCGGGGTGAACCATGCTCGTGATGACGCTTGAACGTGTCCCGCCCTCCCTGCGCGGCGAGCTTACCCGCTGGCTGATCGAGGTACAAACCGGCGTGTATGTCGGCCAAGTGAGTGCGCTTGTCCGCGACCTTCTGTGGGACAAATGCGTCCAGCATGCCCGCGCAGGCCGCTGCACGCAGGTCTACCGAGCCAACAACGAACAGGGCTTTGCTATCCGCATTCACGGTGAACAGGACCGCACGCTCGTTCACCTGGACGGCTACACCCTGGTTGCTGTCCGGGACGCTCGCCACGCGCAGTTGAGCCAGGAGTATGGCCCTCCCGAGGAGCTTGAAACTTTGTGACTAAAATTACGCTCCTCGTTGGAGACTTGAGGGGGATGGACCGCCCCTCGATAGCGTGATTCCAAAGT # Right flank : GGATGAATAAACGATAGGCGGATTAGGCAGAGGGTGTTCCCCACACGGGGCTACGACAAGGTTCGGAAATCCTACTACGCTAAGGAAAAAGCTCGTCCTGCACGAGCTTTACTCGCGCAGTGCCCGATATGCCCCCTCCACGGGGACCCCTTCGGGGCGCCACACGTAGTCGCCCGTCAGCCCGATGTGCTCCCATCCCAAGGGCGACACATGCGCCAGCAGTTCGTCGGGCACGTCCGTGCCCTCCGCGCGCAGGGCCTCCACCGCGCGACCCAGGTACACCGTGTTCCAGACAGCGATGGCCGTCGTCACGAGATTCAGGCCACTGGCCCGGTTGCTCTGAGCCTCGAACGACCGATCCCGAATCTCCCCGCTGCGGTGAAAGGCCACCGCCCGCTTCAGCGCGTGCAGGGCTTCCCCCTTGTTCAAGCCCGCGAGCACACGACGGCGCAACTCAGGGTCGCGCAGCCACTCCAGCGTGAACAATGTCCGCTGGACGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACACGGGTGGGGATGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.10,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 451914-451580 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNI01000004.1 Deinococcus sp. YIM 77859 EI73DRAFT_scf7180000000011_quiver_dupTrim_4943.4_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 451913 28 100.0 33 ............................ CGCCATGAGGTACGCCTCCTCGATCCTCTCCGC 451852 28 100.0 33 ............................ CATTTTTCTAGGTTGGTTGGCCGGTGCAATTGC 451791 28 89.3 33 ..AT............C........... ACCCGAATGCGCCCCGCGCCCACCGTCGTCCCC 451730 27 89.3 33 ...T..........-.C........... AGGTGGGCGCCGAGCTGGTCGGCGAGCGTGAGC 451670 28 100.0 33 ............................ TGAATCCGCGTGTTTGGGACCCTAACCGTCCCC 451609 28 96.4 0 .......................C.... | G,T [451582,451585] ========== ====== ====== ====== ============================ ================================= ================== 6 28 95.8 33 GGTCCATCCCCACCCGTGTGGGGAACAC # Left flank : CCAACAACCAAGCGATTCAGATCCTCCTTGTCGAGGACAACCCCGCCGATATTCTCCTGACGGAAGAAGCCTTTAGCGAAGCGCACTTCCCCCATGACCTCCACATAGCCAAAGACGGTGTCGAGGCGCTCACCTTCTTGCGAAAAGAAGGGAGCCATCAGGACAAGCCCACGCCTGACGTGATCCTGCTTGACCTCAATATGCCCCGCATGAGTGGCCTAGAGCTCCTCGATGTTCTCAAAGCCGACGAGGCCCTGCGCAGCATTCCAGTGATTGTCCTCACCACTTCTCGCGCCGAGAGCGATATCTGGCGCAGCTATAACCTGCACGCCAATGCCTATATTCCCAAACCCGTCACCATCAGTGAATTTGTAGATGTCATCAAATCCTTTGAGAACTTTTGGTTCTCCATCGTGGCTCTGCCGCCCAAGCAGCGTCCTTGAAAACCATAGGGCCATAGGGAAATACTCGGTACCGAGTTCGGCATGCACGGCGCCTAA # Right flank : AAGATTGAGCAACGGTACTACGCTAAGGAAAAAAGCGTGTCCAGGTCGCTCCTTCTGGGAGCAGTCATCCGATACCCAGAAGAGGTTGCCGGGCGGAGGTCAGTTGAACGGGCGTTTCCGAATGTCTTCGCCCAGCGCTTGCAAGCGCGGCGGCACTTCATCCACTTCACGGCGGAAGGTCTCGGCGCTGTTCAAGTACGACTGGTAGGCGGCAGCGCGGCCACGTGTTTCCAGGGTGGCCTGGATCAGGAATTCGTGCAGGGCCTCATCCAGGGGGTCGAGCGGCAACAGCCGCTCGGCCAGGCTCACGCACTTCTCGAACTGGCCGGTACGGTACCAGCCATCCATCGTCTCCAACGCCACCTGTGTTACCCATCTTCGCAACCGTTCACGCTCCTCCGTCGCCCAGACGCTGTCTGCGTCCTTCAAAAAGTCCAGCTCGTACCGCTCCAGAATCTTTAAAAGCGAATCTTGCGGTCGAGCCAATTCTGCCGTCAATA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCCATCCCCACCCGTGTGGGGAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.10,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 416078-413506 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNI01000002.1 Deinococcus sp. YIM 77859 EI73DRAFT_scf7180000000008_quiver.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 416077 37 100.0 37 ..................................... CGCACCATCCGGCTGCACCGCCTGGTCGCGCCCGTGT 416003 37 100.0 37 ..................................... CGAGCGCTGCGGCTGGGAGTGGGGCGGGCGCTGGGGT 415929 37 100.0 36 ..................................... CACATCTGGCAGCAACGAACCCAAGAACAACGCCCC 415856 37 100.0 35 ..................................... AGCTGCGGTGGCTCTTTGCCCGGGGCATTCTCAGG 415784 37 100.0 36 ..................................... CGCGTCATCGGTAAGGGGGACAAAGAAAGGCGCGTG 415711 37 100.0 35 ..................................... CACATCTGGCAGCAACGAACCCAAGAACAACGCCC 415639 37 100.0 36 ..................................... CCTCGCCTGCGCCGCCTTCAGCACGTCCACGCCCGT 415566 37 100.0 35 ..................................... GCTGAACTTCTTGCCGTAGGGCACCCTCTCCCCAG 415494 37 100.0 31 ..................................... AACAGGAGGAGCTGGACCTCGCGGGCGACAA 415426 37 100.0 38 ..................................... AGGCTGGTCCGGCGCGCCATCAGCGGGCCTCCTGCATG 415351 37 100.0 37 ..................................... TGCATCACCCAGCCTGGATGGTGCTGAACCACCTCGC 415277 37 100.0 35 ..................................... ATTTTGGTTTCGACGGCCCGCGCCTGCGCCTGTGC 415205 37 100.0 34 ..................................... ATCCTGCGTGAGCGCGCTCAGAAAAATGTCACCA 415134 37 100.0 37 ..................................... CATTGTCTACGACGAGAATCAGGTGAAGATTCGCCGG 415060 37 100.0 36 ..................................... CGCGCCCACCATGGCCCGTCCCTCGCCGTCCACCAC 414987 37 100.0 35 ..................................... TCGTACCCGGCGAGCCCGAAGGCGCGAATCAGCCA 414915 37 100.0 35 ..................................... GACCTCGATCATGCCCGTGCTCCTCCCATCGCCTG 414843 37 100.0 33 ..................................... CTGGCGGCTCGTGCACGCCTCGCTGGACGGCTG 414773 37 100.0 33 ..................................... CTGGCGGCTCGTGCACGCCTCGCTGGACGGCTG 414703 37 100.0 35 ..................................... AGCATCAACCACACCACGAACGGCACGAGCACCAC 414631 37 100.0 35 ..................................... CAGGAGCCAGGGGACCTCCTGGTCCGCCGCGAGGA 414559 37 100.0 37 ..................................... GATCAGTACTACACCCCGGCTTCCGTCGCCTCGTTGA 414485 37 100.0 34 ..................................... GCTACTGGCTGCCTCAGTTGCAACCGTTCTTCGG 414414 37 100.0 33 ..................................... TGGCGCGGTGGCGGAATCGCGCGGCGTGGTGAC 414344 37 100.0 33 ..................................... TGGCGCGGTGGCGGAATCGCGCGGCGTGGTGAC 414274 37 100.0 35 ..................................... TGCTCAGCGGAGTTCCTGCCGACCGAGCAGCTCCT 414202 37 100.0 38 ..................................... ACGGCCATCGCCAACGAGACGGTGACCTGGAGCCAGGC 414127 37 100.0 35 ..................................... CAACCGCCAGGCGGTGCTCGTGCACGACCAGGACC 414055 37 100.0 35 ..................................... CTTACCCTGCGGCATGACTCCACTCTAAGCACGGC 413983 37 100.0 36 ..................................... GGCCCTATGGAGCTCGACGTGACCTACTCCCACAAG 413910 37 100.0 40 ..................................... AAGTCGGCGGAGGGAAGGGTGAGGCCAAAACCACGAAGAA 413833 37 100.0 36 ..................................... CTGGTGTTGTACTCCGGCTGGAAGGACGACAGACCG 413760 37 100.0 36 ..................................... CTGACACCCTAAACGCGAGTTGGGGAACCCAATCAT 413687 37 100.0 37 ..................................... CGAGATCTTCTTAAAGTCGTGCGTTCGGCCATTCAAT 413613 37 100.0 34 ..................................... CTACGGCCGGATTAATGGAAAGAGACTTCGAACC 413542 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 36 37 100.0 35 GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC # Left flank : GCTCTCGGCCAGTGCCCGGCGAACCCTAGACGCCCTGGACTTCAGCACCCAGAGCGCCTACCGCCAGTTGCTCGAACGCCTGCGCCACGGCGGGGCGGGCGACTGGCGGCGCAGCGCGGAACTCGTGCGGGGCGACGTGTTCAAGTTTCCCAAGGGCCACAGCGTGCACCGCGCCTTTGTGCGCGAGGACGACGCCGGATTGTGGGTCCTCGAGCTGTGCGGCCATGAGGACGAGCGGCGCTACCAGGAGTTGATACGAACCATTCGCTGGAGCCACTACCAGGAAGACGAGTTCTCCGCCTTGCCCTAAAGCCTCCGTTTCTGCGCGAACCCCACGTGACGAAAAAACCCCGGGGGGTTCGCGCAAAGCAAAAAGTCCCTCTGGGACGGGATCTTTGACAACTGACCCTCAAGGCCACCTCCAAAAACTGGACAGCTCTGGGGAGGTTCGCGCAAACTGATGGCGGGGAGCCGTCTGGGACGCATCCGGATGGCGAACC # Right flank : CTAGCTGCTCGCGCTGGTATAGCTGGCCAAAGCCCTCAGCCAAAAGAGGCGCGTCAGAAGCAGCAGAACTCCTGCCACCACGGGCGCGGCCACAGCCAGTGCTGTCGGCAGGGTACCGGTCATGGCCTGAGCCGGCACAGTGGTGATAAAAGCCACGGGCACCACAAAGGTCAGCAGGGCACGGATGGGCAAAGGAAAGGCTGTGACTGGAAAGCGGGCTGCACCAAAGACACCGTTAAAGAGCTCGGCAGCGTTTTGGGTCTTTACAAACCAGAAGGCAGTGGTCGAGAGCGCAAGCCAGATACAGTACACGATGACAACAGCGCAGAGATAGAGCAGGGCAGAGAGCAGGATTCCTGGCCAAGTCACCTCAAGTTGGGAGGCAGCATAAACGATGAGAGCCGCACCTATACAAAGATCAGTTGCACGCAGTGCATTCAGATGCCGAGTGGAGACGTTGAATTGGGCATCTATGGGCTTCAGCAGGACAAAGTCCATGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.50,-15.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 2 470059-472123 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNI01000002.1 Deinococcus sp. YIM 77859 EI73DRAFT_scf7180000000008_quiver.2_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 470059 37 100.0 35 ..................................... CCAAATATTTGGTGACCATGAACACCGCCCCGCCC 470131 37 100.0 35 ..................................... TCTGCGGGTGGGCATTAGAACCCTCCTTGTGTGGG 470203 37 100.0 36 ..................................... TCCAACGTCCGCGCCGCCGCCGAGCTGTTTGCCCAG 470276 37 100.0 37 ..................................... TGCAGAGAATCAAGTGGAAGCCTTCGCGCACTACCTC 470350 37 100.0 37 ..................................... TACATCACCGAGTTCGTGAAGACGGTCCTGGCCCGGC 470424 37 100.0 31 ..................................... ATGCAGCCGGGCAAGGTGCGGGACGACACGG 470492 37 100.0 40 ..................................... TCTATTTCCGACAACCCCGTCGTGCTGCGCGGCCAACCGT 470569 37 100.0 36 ..................................... CGTGACGCCGCCCAGCAGGTCCAGGCTGGGGAACGT 470642 37 100.0 35 ..................................... ACGCCAAGATCTTCGAGAGGGATAGAGAACTCTTT 470714 37 100.0 34 ..................................... TTATACCCGCTTTCAATCGCCTTCAACTTCTCGG 470785 37 100.0 33 ..................................... GTTGTCAATTCCCCACTTGTCTACGAATTCGAT 470855 37 100.0 34 ..................................... GATAGGTGAGCGTTCCCGCCAGCCCCACACTCAC 470926 37 100.0 32 ..................................... TTTCCTGAGAGGGACCAGGGAAATGGGGAGGG 470995 37 100.0 36 ..................................... GCCGAGTGCGAGATGCTCTCCGCTCAAGTGGCGGCG 471068 37 100.0 36 ..................................... CGGGGCGGCTGAGGATGGACGCCTCGGCTCCGCGCG 471141 37 100.0 32 ..................................... ACGCTTGCCCGCCAAGTGGCGGCTATCGTAGC 471210 37 100.0 35 ..................................... GCGCCGTCCCGCTCAACCTCGTAGGCCTCGCCCGG 471282 37 100.0 34 ..................................... GCCTGAGAATCCAACCGCTTTAGCGGTTGGAGTT 471353 37 100.0 34 ..................................... TGAGATAATTATGCCAGATATGGCAGAGTATGTC 471424 37 100.0 35 ..................................... AAAATTGAAAACACGGGTATGCACCCTTCCACCAG 471496 37 100.0 36 ..................................... GAACTGTTCCCCGTACAGCGAGACTTCGACTCCCAT 471569 37 100.0 44 ..................................... GTGCCTTTGAGCTAGCGCATGTCGCGCACGACGGCATCAATCAC 471650 37 100.0 35 ..................................... CATACTTCTCCCAACGAAAGGCGCTGAATTCGCAC 471722 37 100.0 38 ..................................... CGGGAACTATCCGGCGCGGCAATGGCAGATTCTCGCGC 471797 37 100.0 36 ..................................... CAGTGAGGCAGCAGGCGTCCAGTGAGGCAGCAGGCG 471870 37 100.0 36 ..................................... GTAATGACCCCGTTCCTGCGGCGAACCATGATGCCC 471943 37 100.0 36 ..................................... GACGGTGCCCCAGAACGTATCGCCCCAGGTGTTGCC 472016 37 100.0 34 ..................................... CACCTGGCCAACCGCGTGCGCCCCACCCCGGCGG 472087 37 83.8 0 ..........................C..CCCT.C.. | ========== ====== ====== ====== ===================================== ============================================ ================== 29 37 99.4 35 GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC # Left flank : CCCCAAAGGGTGAGCTGATTGAATTCAGCCTAGGCAGTGATCCCGACGTTCGCTACACGCGAACCGTCCAGCTTCTGAGCAGCGACCGGAACCCCCAGGGCAACGTCCTGAGAAGCACCTACCGAGTGACCTATGCCTTCGAGAACAGCAAAGACCGCCCTGTCCGTGCCGAAGTCACCGAACGGGTCAACGGTCGCCGCATTCTGATCGACGGCGTGACCAAGGGCCAGAATGCTTCCGCCGAGCTGCGTGTAGATGTGCCCGCCAACGGCAAGGTGACAAAGAGCCTGACACTGGTCATCGACAACAGCGAGCAGTAGACTGCGCGAACCCCACGTGACGAAAAAACCCCGGGGGGTTCGCGCAAAGCAAAAAGTCCCCCTGGGACGGGATCTTTGACAACTGACCCTCAAGGCCACCTCCAAAAACTGGACAGCTCTGGGGAGGTTCGCGCAAACTGATGGCGGGGAGCCGTCTGGGACGCATCCGGATGGCGAACC # Right flank : CAATGCCCTCGAGGTACGCCCGTACGTCGGCCTTCACGGGCATAAAGTACATGTGCTGGCCGCGCTCGCGGGCGAAGGCAAGCGCTTGGGCGGCAAAGGCGCGGTTCCATTCCAAGGTGGGCTGGAACTGGCGGGGGAAAACGGCGTGGTTGCGGGCACGCCAGTAGTTCAGGGTGGCTTCGCTGGTGACGGTGGTGGCGCCCCACCAGACTTCGGCACCTTCTGGGATGAGGTCGGCGTAGGCGTCCATCAGGCGCAGGTCAAAAAAGGGCTGGGTAAAAAACCCGCACGCGCCCGCGTCAAGCTTGCGCTCCAGGTAGTCGCGTTCGCGGGCGAAGCTGTGACGGTAGGGGTCTAGGCCCGCGTAGACCCGGAGGTGTGGGAGCTCGCGCCGAAAGCGGCGGATCGCCCGCACGGCGTCCACGTCGTAGACCTGGGCGCTCATGTCGGCTGGGGCGTCGCCGGTGATGATAAGCACCTCGTCGATGCCCGCTGCCTCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.10,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 3 938008-938278 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNI01000002.1 Deinococcus sp. YIM 77859 EI73DRAFT_scf7180000000008_quiver.2_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 938008 26 92.3 35 ................T.G....... CCTTTTTTGGTGGCGAATCAGTGGCGACTGGCGAC C [938014] 938070 25 96.2 36 ......................-... GAGGACTCGGTCCCATCTTGAAAACTTTTCAAGATG 938131 26 100.0 35 .......................... CCGGCGAGGTCTTCAAAAATAACAATTTGTTAGAT 938192 26 100.0 35 .......................... CCTCCGCGTTTGCCGCAGAATTGCTTGAGGGTTGC 938253 26 80.8 0 C...............T.G.....CA | ========== ====== ====== ====== ========================== ==================================== ================== 5 26 93.9 36 GTCTCGCCCGCGTGCGCGTGGGCGGC # Left flank : GTGGGCGCTCTTTTTTTAGTAGGAAAATGTCGGAAAATGTGCGCCCATCGCGGCCTACGCGCTCGGTTGACTGGGCAATTTGCCCAGTAGAGGTGAGGAGCTTGAGTCCACTTCGCAAATTGCGAAGTCAGCTGCGCGCTCGTTTGACTTGCTAATTTCGCAAGTCGCCTCTAGCTCAGCCCCGCGCGCACACGGGCGAGAGAGCGGGCGCGTCTGTCATCGAATGACAGATAGCGCGGCCCCCATGCGGGCGAGAGCGACCTTAACATTTATTAACAGCCGAGCGCCGACGGCGAGCCGGTAGCGGTTTGATGGCGAACGCGCTGTTCGGGTTCCTCCTGGCGCTGCTGGGCGCGCGGCGAGCTGGTAGCGGTTAGGTAGCGAGCGCGCTATCCGCAGTCTTTTTTGGGGTGGCAATTACGGGGGATAAGTGCGTGAAAGCCACCACCTGGGCGGATAGGCCGCGCTGAGCCTATCTGCGTTTTTCTCGCAGATAGCAG # Right flank : AGACACCGCATTTTTGCGGGCATCGGTGGGGGCATGACGCGGCGAAGAGAAAGCCCCCCGGTGGCAGGTCCGGGGGGCCTTGATGGGGCAGGTCAGTTGGGCAGGTGGGGCACGGGCTGGGCTTCCTTCTTCGCCGTCACGCGGCCCCCGCGCCCTCACCCGCGAAGACCTGCCGGGCCTCTTCCCACGTCTGCCGGGCATGGGCATACGTCCCCAGGGCCTCTATCAGCTCACGGGCCGCCCGGACCGCGTGCAGGGCAAGGCGCTGCCCCTGGCCCCCTTCGCCCTCAAAGGTCACGCCGGACCTGGCGGGCAGAAAGACGCGGCGCTTGCCTTCGGGCAGCGGGTGGGGCACTTCCACGGTCACGCCCACCCCTTCAGGCACCCGGAAGACCTGCGGATGCCCCCCGGCGGTCAGTGTCCCCAGGTACAGGGCGGGCCGCCCGTCCCCCTCGAAGATCACAGCGGCGGTGCTGACGGCCACAGCCCCCGGAAAGAGG # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGCCCGCGTGCGCGTGGGCGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 4 2151589-2150038 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQNI01000002.1 Deinococcus sp. YIM 77859 EI73DRAFT_scf7180000000008_quiver.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2151588 37 100.0 35 ..................................... CCGTCGCACCCGGCCCGGCGGCACACCTCGCACAC 2151516 37 100.0 37 ..................................... ACTAATGTCCGGGGCGACCCCCAGGGGGATAAAGCGC 2151442 37 100.0 35 ..................................... GGTCACGTAGTCCGTGATCGTGTAGCCCAGATCAC 2151370 37 100.0 34 ..................................... TTCATCAAAAATACCCCGACTGAGCCGGTTTGGT 2151299 37 100.0 34 ..................................... ATGGAGCATCCTCCGGGTCCGCTCACCGTGTCTC 2151228 37 100.0 33 ..................................... GGCGAGAGGAACCACACGGGCGCACACACCGCC 2151158 37 100.0 35 ..................................... GAGGGGTTCGAGGTCCACCCGGTCGCACAGTTGCC 2151086 37 100.0 34 ..................................... TCCCATCTGGTCATTCCCGGTGGCTACGTTGATC 2151015 37 100.0 34 ..................................... GTTGTTTCGGCAATCAAGGCTTATTCGGCGGATA 2150944 37 100.0 36 ..................................... GATATGGTATAATAATCCTAGGCGGAAATGCCTATG 2150871 37 100.0 38 ..................................... GTGTTGGTATACCAAACCATTGCCAATGTACAGCGCGA 2150796 37 100.0 36 ..................................... CTTGTTGCGGGAGGCCAAGCTCATCTCCGCCGAGAC 2150723 37 100.0 37 ..................................... CTCGTCGTAATAATCGAAGCCTCCCCCGAAGCTCGGG 2150649 37 100.0 35 ..................................... TGCAGCCTACGCTGCGCCGCGCCTCACTGAAAAGC 2150577 37 100.0 33 ..................................... TCTCTCTTCATATCGCACCCCGCGTGGGGAATT 2150507 37 100.0 36 ..................................... CGGTAGCGCGCGGCCAGCAGCAAGGCCGGTAGCGAG 2150434 37 100.0 36 ..................................... TGCGGCGGATAGAACTTTAATCGCCTGATTCCGCGA 2150361 37 100.0 33 ..................................... CATGAACCCCATGAGTCTAGTGAAATATGCGGT 2150291 37 100.0 37 ..................................... TCGGGCGGGGCATAGAGGGATGGCGGCTGGTCGAGAT 2150217 37 100.0 35 ..................................... CGTTGGACGGGAAGCGCCCGGTCAGCCGCCACCAT 2150145 37 100.0 34 ..................................... GCCAAGGGTGAGGACCCCCCGCGCCCGCCCGGCC 2150074 37 81.1 0 ..............................CACTGCG | ========== ====== ====== ====== ===================================== ====================================== ================== 22 37 99.1 35 GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC # Left flank : GCACTACCCTCCATACCTCCACCGATGATTGACCTGCTGATCTGCTACGACGTCGCCACCCAGACCGAGGCGGGCCGCAAGCGCCTGCGCCGCGTTGCCAAAGTCTGCGTCGCCCACGGCCAACGGGTACAAAACAGCGTCTTTGAAGTCAGCGTGAGCGAAGAACAACTCCTCACCCTACGTCAGAAGCTGCTGAGTATCCTCGACCCTACTGAAGACAGCATCCGCATCTACCGCCTGCGGCAGCCCCGTCAGCACTTTGTGGAAGCCTACGGCCTGGACCACTACCGCGACTTCAGCGAGCCACTCATCTTGTAAGCTTTGCGCGAACCCCACGTGACGAAAAAACCCCGGGGGGTTCGCGCAGAGCAAAAAGTCCCTCTGGGACGGGATCTTTGACAACTGACCCTCAAGGCCACCTCCAAAAACTGGACAGCTCTGAGGAGGTTCGCGCAAACTGATGGCGGGGAGCCGTATGGGACGCATCCGGATGGCGAACC # Right flank : CTTCAGCCCAGGTCCAATTCGCGCAGGATGTCCTGCATGCGGGCACGTTCTTGCTGAGCGCTCTCGGTGTCGCCTTGCCCCAGGTGCCAGTCCACCAGGTGCGTGCGGGCCTCGATGTTGAGGGGGTCAGCAGCGATCAGGTTCCGTAGGGCGTCACGCCGCTCCAAGCTACCCTCGGGCTGGGCGTCGGCATAAACCCGCAGGGCGTCGTGCAGGAGCCGCTCGGCCAGCTCGCATTCCTCGTGCAGCTCGGCAGCCAGATCAGGCAGGACAGCCGGGGGCGTGGTCTCTTGGCGAATCAGGGCCGCAATCCGGTCCGGATCGCGGGCAGCCAGGGCCTCTTGCAGGTCCGCCAGGTCACTGTGTACCGGAAAAGTCAGGGTCAGGCGGCCCCGCGCGCTGCGAATGAGGTTTACGCCGAAGGTGCTGCGCAGGTGATACACAGCTGTTTGCAAGCTTGCCAACGGGTTCTTGGCGTCTGGCCAAAACCGCTCGGCGAG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.50,-15.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //