Array 1 902037-900940 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ004561.1 Paenibacillus polymyxa strain EBL06 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 902036 30 100.0 36 .............................. TCGGGAACTGAAAGCTTCCAACTTTCAGAATCCCAT 901970 30 100.0 36 .............................. GCGTTTTTGCCCACATCGGTTGATAGAATCCCTTAA 901904 30 100.0 36 .............................. TTTTATAAATTGATTGCTAATAAAATCGAAATCCAT 901838 30 100.0 36 .............................. TATGGAAAACAGACAAATTTTTGCACCCGAGATACT 901772 30 100.0 36 .............................. CGGCTCAGGCTATTCTACTTCTACCACGGAAGGGAG 901706 30 100.0 36 .............................. ATTTAATCTTTGAGTTTGCTTTTCATATTTTGCTAA 901640 30 96.7 36 ............T................. CAGTGAGGAGGGGCAAAAGATGGCATTTGTAATAGG 901574 30 100.0 38 .............................. TCGACTAAATAGGTATTTATGACATACAGCCTGTACGC 901506 30 100.0 36 .............................. TGAAAACAGGTTCCAATTTCGTCATGGTCGTGGTTG 901440 30 100.0 44 .............................. TCCGTTACTCGGGAACTGAAAGCTTCCAACTTTCAGAATCCCAT 901366 30 100.0 35 .............................. TCCGTTACTGTAATCCTACCAGTCGCCCCGCCCGA 901301 30 100.0 37 .............................. TGCGGGAAGGTCGGTGGAGAATGGGTTTCGTGAGGCT 901234 30 100.0 37 .............................. GCGATGTAAAGCAAGTCCTGGCATTCATGAGTGACTA 901167 30 100.0 35 .............................. TTGAATTAGACCGCCTTTTCTATTTTTTCTTCTTC 901102 30 100.0 37 .............................. GCGTCTTGGTTCAAGTTCTTAACAAACTGCTGCATGA 901035 30 100.0 36 .............................. CGTGAATGCGCTGGGTTCTTTATCTCTGCTTTCTTG 900969 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================ ================== 17 30 99.8 37 CTTTAACCACAACATGAGGTGTATTGAAAT # Left flank : GCCCTTTGTCCCTTTCTTGGAAAAGGAGCATAGATAGAGTTATGGCGAAAAATTACAACTATGTTATCTTGGTCTATGATATCGGAGAAAAGCGAGTGGGTAAGGTATTTAAAATATGCAAGAAGTATCTCGTCCATTTTCAAAAATCAGTGTTTCGGGGTGAGATTACACCCGCAAATCTAATTCAATTACGGGCGGAGTTGAAAAAAATAATTGATGAGGGAACAGACTTTGTGGCTGTGTTTAAAATGACTGGCGATTATGTTTTCGATGAGGAAATCATCGGTGTCCGTTTGAATGATTCGGAGTCCTTATTGCTGTAATTTTCCCAACCGCCTTAATGGATAGATAGCCTCTACTTCTTACAGCCACAAGGGTTATCGGAGATTCTCTGTGCAATTAGCTGCATCCGTCTTCCGGTTGGGAAAAAATTTCGAAACCCTTGGTGCTGTAGTAAACTAAGCACGTTGCTGAAATAAAAAAAGCTTGATTTTACTAGC # Right flank : TATGATCCGGGTGCGGGTGTTCCAAAAGGCGACTTGTCTTTAAGCACAACATGTAATCAAATTACTGGCAGTTGAAATTCCCCTATCCTATACTGAAATAGTCTATAATCCGATGTTTGGAATACGGTGTTATAATTTCCGGGGCAAGCCTAGTGTGAGAGATTAGGGATGTCAGATCACGAGCTACGGTACAGAACCGTCAATAAAGGAGAGCAATGATGTTTGTTATACGGGGAACCCAAAAACTGCTGAAGGAATGGGAGACTGAACCACTTCAAGTTGATATTTATCCGCCTTTGAATAGTTGGCATGCCAGCTTGTTTTTATTGAACCGGAGAAAAAACATTGTGTTTATGCATGATATTTCCCGCTTAAGCGTCACGCTGTTTGGGATTAAAAAATCGCAGTACAAAAACCTGCCGTCTCTTTTTGTACAAACCTTGAAGGAATTAATGATCAGCGAAGGGTTTGATGAACAGATCGTTAAGGCATACATACAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCACAACATGAGGTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : NA // Array 2 913105-911752 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ004561.1 Paenibacillus polymyxa strain EBL06 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 913104 30 100.0 36 .............................. TGCCGGAAGCACCAGCGGTAACGAAAGATGTATACG 913038 30 100.0 36 .............................. AGATGCTGAATCGCATAAACGTCGTCAAGAACACTG 912972 30 100.0 36 .............................. ACATTACACCGACCTGATGCAACGGATGCAAGCGGA 912906 30 100.0 37 .............................. TTTATGATGCGGAAGGGGCCTGAACGCATGGGGAAAA 912839 30 100.0 37 .............................. GTCACACGTAACACCGGATACATCCTATAGCGGTACC 912772 30 100.0 36 .............................. AGGTTGCCATTACAGAAGGGCTAGTAGGGGATACAC 912706 30 100.0 37 .............................. GATAAGATTGATAGTTCCAGGTGATTGAACCCATCGT 912639 30 100.0 36 .............................. TGGAAGATGAATATCTGCGAATCGTTGAAGATATTT 912573 30 100.0 36 .............................. CCGATTCAACCGCCCGGATAAACTCAAGAGCCTTTT 912507 30 100.0 36 .............................. ATTGTAACGATCACTCTTTTTCACCCTTTATGCGAA 912441 30 100.0 36 .............................. GCATATGCTACCGCCTCAACACCAACCTTATGCAAA 912375 30 100.0 36 .............................. ACATAGTCAGGATCAAGCCCAGCGTTCTCCACTTCT 912309 30 100.0 35 .............................. GCCGATACACCCTGTATTGGCACATCCTGTATTGG 912244 30 100.0 36 .............................. AGAGTCCATCATTTTTGGTGGGCTTTTTCTTATTCC 912178 30 100.0 36 .............................. CGAACACCACCATAATTTTTGCTATGAAAATGTGAC 912112 30 100.0 36 .............................. TTGCGGTGATCGTTGCAAGCATGGTCTTGTACGTAA 912046 30 100.0 36 .............................. CGCATCAAGCTTCGACCTCCCCGCCGAGTAGCGCGA 911980 30 100.0 36 .............................. AACCCACCGTCTGGCACCTTTATATTTCCTTTCGGG 911914 30 100.0 36 .............................. TCATGTGCAATCATTCCCTGTTGATCAGCACGGAGC 911848 30 100.0 37 .............................. GGCTCCGTGGTGACTGATATGATCATGTTACCTCCGT 911781 30 93.3 0 ................AA............ | ========== ====== ====== ====== ============================== ===================================== ================== 21 30 99.7 36 CTTTAACCACAACATGTGATGTATTGAAAT # Left flank : TAAAATAAAGGCATCAGTTATCACTTATCACTTATGCTTTTGATAGATACGGTGATAGTTATCTTCATGTAATTTTAACTTACTGATCAATGATGTTTCATTAGATGTGGTCAACTTTAGTGGCTGCATCTTTTTTGGTAAGACTCACGAACAAGATGAGAGAAACATCCAATGTTAAGGTTTTAGTCTAGTTTGCAGTAGTTTTAAACTAGAATTAAAAATTTCAATACACCGAGTGTTTAGTTGAAATCATATTTTTTCTTCGATACACATTTTACATTATACTCTTGGGCAAGGGAACTCAACATAGACCGAAGGTCTATTTTTTCCCAACCTCATAGCTAGTGTGAAAGAGTGAATTCCTTAGAACCACAAGGGATATAACCGTTTTTCTATATATTTGGAAAGAAGGGACTAACGGCTGGGAAAAAATTGCGAAACCCTGGGTGCTGTAGTAGAATAAGCACATTGTTAAATCTCAAAAGCTTGATTTTACTAGG # Right flank : ATAAGGGGGATACACCTCCTACTACCTATACCAATAGCTTTAACCTCAACATAAATGTACGAAGTCTTAAGCAGCGGAGCGGGCAGAATTGTTCTGGAGAAGCGTAAGCGGTTGCCTTTATCCCCGAATTTTAACCTTTGAAGGGTTTATACAATCCTAAAAAATTTGGGAATAACAGCTATCGCAAGAACAATCTGCACGCGTAGCGGTCCAGGTATCATCTGAGCCGATTTTAAAACAGAAATAAAACGAGGTTTACAAATCATGGAGCGAGGTCTATACTCTATATCAGATCAGGAGGTGAACGTATTGTATTATGAAATTCACATAACAACGTTAATTAAACAATCATCTCATCATCTGGAGATACCGGAGCGTATCGGAGCCTGGATTGGTCGGGCTGGGTTGAAGGACGAAGCGTTGAAGCAGACGCACTACGACAAGGACTACAAGCATTATACATTCGGGGCGCCTTTTCCGCGTGAAAAGGAGGGGATGTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCACAACATGTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 3 915695-914150 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ004561.1 Paenibacillus polymyxa strain EBL06 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 915694 30 100.0 35 .............................. CGGGTATACTCAATCGCTCTACCATGTTCTTTATA 915629 30 100.0 35 .............................. AAGAAGTTATATACGTAAAAAATAGCCATTTGTAT 915564 30 100.0 36 .............................. TGACTTCTGACTCTATGACCTCACCAATCGTTCCCT 915498 30 100.0 36 .............................. AAGTTTATTTTTTCAGAGACTGCCATATCTAAGTCT 915432 30 100.0 37 .............................. ATTAGACCCCAATATCGGATCAGCATCTAATATATCT 915365 30 100.0 36 .............................. ACTTTAATCACATAAAAGTTTAGTAGTTAGGAGGTA 915299 30 100.0 36 .............................. CTCTTTTCCCACCTTTTATACGAACAAGTATTTGCT 915233 30 100.0 35 .............................. CAGCGTAAAAAAACAATCTCCTTATATATTAAAAA 915168 30 100.0 36 .............................. GTATGTAAATCGGGTATACATTCGTGCATCCACAAA 915102 30 100.0 35 .............................. TTAGTTTCTAGCAATTCAGCAATCATGGCTTCTTG 915037 30 100.0 36 .............................. GGGTGTTGGTCAAAAGTATGAGTTTAAACACGATGG 914971 30 100.0 36 .............................. GTTTTAGAAGGCGAAGAGAAGAATTCACTTTCTCAC 914905 30 100.0 36 .............................. AGGTATTTTACGCATTTACTGAAATAATATCCTCCA 914839 30 100.0 36 .............................. ATATCTGCGTCCTCGCGTATCGTAGTACCGTACATA 914773 30 100.0 36 .............................. TCCGTACCGCCCTGCGCCTTGACCGCTGTCCGCATT 914707 30 100.0 36 .............................. TCAGAAAGCTAATAGACGTTTTAAGCATTTCAGGAA 914641 30 100.0 36 .............................. TTACAAACGGCGAAACCGTACCCATCATGTTACGGT 914575 30 96.7 36 ..........................T... TGTGTAAAGAGAGTTCACCTCATTGGATTTCGTATT 914509 30 100.0 35 .............................. CAATACAATGTGATGTTAAGAAGTGAGCAATTGGA 914444 30 96.7 37 .........T.................... TTGATTTCTGAAGTTTCTTGAAGCTGAAAAATTTCAG 914377 30 100.0 36 .............................. GGTGCTCAAAATCCGAGAGAATGCGAGATTGGACGC 914311 30 100.0 36 .............................. ATGGATAACTTGTCATACACCACGCTTTTTTCATCA 914245 30 93.3 36 ................AT............ AACATACGTTCTCCGCGCTTCGATCTCTCTAAATAA 914179 30 86.7 0 .........A......AA.......A.... | ========== ====== ====== ====== ============================== ===================================== ================== 24 30 98.9 36 CTTTAACCACAACATGTGATGTATTGAAAT # Left flank : ATTGTAGCCCTCCTTGGTGAGTGCTTTGAGCAGCATTTCAGCAATGGATAGATCGTCTTCAATAAGTAAAATATGCTGTGACATAGGTGTGAAACACCCCTAATTTTTAGATTAGCTCGTGTGACGAACTGTACCTGAATTATATAGAGCAGTGGAGGGGATTTCCATAAAAAATATTCATTGAAGTTGAGTGGGGAATGTTCGTAGGAGATTTAAAGGGGCGTTTTTCCCGATGCATTGGCTTTATTTCAAGAATGATTCTCAACGGTGTACATCCAGTGATGTTCCTAATAAATTAGGGTATTTCATTAAGCGATGTAGGTGATTTTTTCCCAACCTCTTAAAAGGGTGAAACGCGGAATTTCTTAGAGGTGCAAGGATTTAGACGTTTTCCTCTACAATTTGAGGGGAGGGGTCTACGGTTGGGAAAAAATTGCGAAACCCTTGTGGCTGTAGTAAAATAAGCACATTATTAAAACTAAAAGCTTGATTCTACTAGC # Right flank : GCGTGAGTGTGTTACTAATCCAATCATGGGAATTCAAAACAGCATCCAGAGTAGCCTCATGAACATGTTTTTGAATGGAAAGAAGATGGGACATTTAAAAGAGTCAATAAAAAGTAGGGGGATAGTTTTGGAGTACACTGAACTGGTAGAACGTTTTGAAATGGGAGAAGAGTTTCAGTTCTGCTATAAAAACGATAGCTACTGGATTAGCAAGAATGAAGAAGAATACTTTCTTACTCGGGTAAGAGACAGTTTTTCGCAGTCGTTTGAATCAGCACGAGAGCTGTTTGCTAATGGGAAGATTGACGATAAGACTATTTTAGAATTGTGGGATAACATAGAAATTTGAAAAAGTATATTTTGAGCTTGCTCCTTTAACAATAAAATGGGAGTGAGCTTTTTTGTATAGTATGCTAAAAAGAAGGTTGTACTCGTAGAAAATCAAGGCAAGGCGTTTGTCTTGAATGTTTCAGGGAAAGCATTAGTTCCTTCAAGTAACG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACCACAACATGTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA //