Array 1 438131-436248 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047026.1 Polaribacter sp. L3A8 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 438130 36 100.0 30 .................................... TGGCAAATTGGCGGGTACTGGTTACGAGTT 438064 36 100.0 30 .................................... GGAAAATCGGAATATTGTACCGCATTTTCT 437998 36 100.0 29 .................................... AAGGTATAATAGATATTGAACACTTAATA 437933 36 100.0 30 .................................... GGTATTTCGTGTATTTGTAATTGCTTATAT 437867 36 100.0 30 .................................... CGAATTAGAGGTAATTGCCTGCGGCGAAGT 437801 36 100.0 30 .................................... TTTGCTGTAATAAGTGAGCCAGATTCAGAA 437735 36 100.0 30 .................................... TGCCTTAAAACCAACCATACAAGATGCATT 437669 36 100.0 30 .................................... AGTTTTAGTTCAGCTTCTTGTCTTTTTGTT 437603 36 100.0 30 .................................... TCTGCCAAGAATAGATTGTTGTAAATCATG 437537 36 100.0 30 .................................... AAAAGGCTACATCTATGGTGGTACTTACAG 437471 36 100.0 30 .................................... TGTAGATCCTTTAGGTAAGCGTAGAAGCAA 437405 36 100.0 30 .................................... ACAGCAGAACCAGTTAAGGAAGCTTTAACA 437339 36 100.0 30 .................................... GTGAGTGGTTCTACGTCTGCTAAAGGCACT 437273 36 100.0 30 .................................... TGTTTTGATGGAATGAGCTGTTTACAAATT 437207 36 100.0 30 .................................... CATATCGAAGAAGTATTTGGTCGTGGTAAA 437141 36 100.0 30 .................................... TATCTGCGATGATGGGCAGAATGTTTCAAA 437075 36 100.0 30 .................................... AGTAGCAGTTTTTCTATTGCAGCATCTAAA 437009 36 100.0 30 .................................... TAAACAGTAACCAATATCCAGATAGAAACG 436943 36 100.0 30 .................................... AAAGCACCAGTACAGACAATGTTATGGCAT 436877 36 100.0 30 .................................... AGCGGTTTGGTTGACGGTTGAAATGTACGA 436811 36 100.0 30 .................................... TGAGCGTATAAAATTAGAAACTGGTTTCAT 436745 36 100.0 30 .................................... ATTAAACGCTGTTTAAAACACTATTAAATG 436679 36 100.0 30 .................................... TTGGTTAATTTTTCTTTCGTTGCAAGAGCT 436613 36 100.0 30 .................................... CTTTGAGGTTGATGAATATGATGGTGCTGA 436547 36 100.0 30 .................................... GATTGCACTTCTGCTGATAAATCTATCCTA 436481 36 100.0 30 .................................... TAAAGTTTCAGATTCTTTTGATTTGTAGTT 436415 36 100.0 30 .................................... GAGTTCCAAGAGATAATTGAAATACATAAG 436349 36 100.0 30 .................................... ATCAGTATGTGTCAGTATCAGTATGTGTCA 436283 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 29 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Left flank : AAACAAATTCATCCACATGAACAATACCGGTCATAGGACTATTTCCACTACTTTCCATAGCTTCTCTAATTTTGAGCATAAATAAACGTGCAGTCTTTTCTGTTACACTAAAACGAACTGCAACATAACTAGCAGAAAGGCTTTTAGTACTCGTACTCATTTCAAAAACAATAAAGAAAGCTTTTCTAACACCAAACTTTACTTTATGAAAAAGTGTGTTTGATGTAGATGATTCTTGATGAGAGCAAATATTACATGTCCGTGAAAAATCTTTTCTTATTTGAGCCTTTTTATGTCCACATTTAACACATTGAAATCCATCTTTCCACTTAATATCTGCCAAGTATTTCTTGCAATCTTCATCCGTTTTAAACCGATCAGCAAACTCTAGAAGGTTTTGTCCTTTAAATATATTCATAATATTACTGTATTTGTTGTTTTTAAAGATATGAATTTAAATACTGACCTCTAAAATTTTTAATATAAAACAGTAAAATTAT # Right flank : AGTTGTGCTGTTAACTTCTAATTATCATAGTTTTAAAGTAAATATCGTAAATAAAAAATGCTTCTTATAAAGACCTAATTGCTTTATTTGAAGCATTTTTTGTTTTCTAAGAAGCAACCTCTAGGAAAAAACTAAATAATGAAGTTATCGGTTATTACCCTGCTATTAAAAAAGTTCTAATTGCATTGGAGGCGGTTCTTTTGGGGTTGGTACTTTCCCCCAAAAGTTCATAATATTGCCATATTGTTTATCTGTAATTCTTAAAATACTTACTTTTCCGTAAGGTGGTAACAAAGCTTTTATCCTTTTTTCATGAGCATCTGCACTTTCGCTACTCGCACAATGCCGCATATAAACAGAAAATTGCATCATTGTAAAACCATCTTTTAATAAGTTTTTTCTAAACAATTGTGCATTTCTGCGGTCTTTTTTAGTATCGGTAGGTAAATCAAAAAAAACAAATAACCACATAATTCTATACCCATTTAAATCCATAGTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 440745-439128 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047026.1 Polaribacter sp. L3A8 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 440744 35 94.4 29 A..-................................ CTCCTGGTTTAGAAAACGCTGCTAAAACT 440680 36 100.0 30 .................................... AGATTTACAATAATGGAAAAGCACTACAGA 440614 36 100.0 30 .................................... AAATTAATTTTTAATTGGTAGTATTACCAA 440548 36 100.0 30 .................................... TTTTGGAGATTTAAGAAACCCAACCGGTAA 440482 36 100.0 30 .................................... ATCAATTCTTTTTTTCCATTCACCTCCACT 440416 36 100.0 30 .................................... TTTAGTTTTGTTTTGTGATTTCCAATTCCA 440350 36 100.0 30 .................................... AAAGATAGATTTACTTATGTCTAATAATAA 440284 36 100.0 30 .................................... GGCATAGAAAACGGCGGTAGTAATGATGCG 440218 36 100.0 30 .................................... GAATGTAAGAACCAGAGCGATTCTTTGAGA 440152 36 100.0 30 .................................... TTCTATTCTCCAACCAACTAATGTATTAAA 440086 36 100.0 30 .................................... CTTACAAGCCTTATTACGATAGGTTATATA 440020 36 100.0 30 .................................... GCGTCAGAACCAAAAGGACCAGGAAAAAAA 439954 36 100.0 30 .................................... TTCAGAATCAGATGAAAGCGACTTCATATA 439888 36 100.0 30 .................................... CGTCAATGTTAGTGTAATCAAATGTTTTTT 439822 36 100.0 30 .................................... ACTATATTATACTTCATAATCTATTCTTAA 439756 36 100.0 30 .................................... AAAAATGCAAAAATTAACAATTCCTTCAAT 439690 36 100.0 30 .................................... CTAACACCTGAGAAAGTAATGTTTTACCAA 439624 36 100.0 30 .................................... ATATTCTTCATAATCCCACTTAGATAGCCA 439558 36 100.0 30 .................................... GTAGGTGGTTCTCAAGAAACAAGCGCACCA 439492 36 100.0 30 .................................... AGAAGACTCTGATAAAGAGTTATACGAATA 439426 36 100.0 29 .................................... TTATTATAATCTTTTGGAGAAGTTGGATA 439361 36 100.0 30 .................................... TAAAACTATTATTGATAAAATAGTTTTAAG 439295 36 100.0 30 .................................... AAATAAAGAGCAGCAATATGATGTGTTTAT 439229 36 100.0 30 .................................... TTAATATACTTCTTGAAACTTTTGCCATTA 439163 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.8 30 GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Left flank : AGTTACAAGATCTAATTTATTAATTAATAATTTAGAGGCAGGTAGCTATTTTAAAAAGAGTAATGTTAATAATCAACTCTATCCAATTGCTCCAGAAAAAGATAAGAATAATAATCCGTTAAAATATATTTTAATAAAGGGAAAAATGGTTTTGGTTTATGATAAGAATCCTGAAGAATTATTTGAAATGGATGAACAACAATTACTGGAACGTTTATTTCAAATAACACAATTGGATGTTGAAAAATCTGCAGAAATAAAGTTATTACATCATACTGAAGCTCGAGAAAAGAAAACTCTAACATCTATTATGGGACTAAAAAGTGGTATGAAAGGAGGGAAAAATATTGGCGAGCACAAAAAATATCCATGGATAAAGGTAGGTGTTAATAGTTTTGATTGCCTTGTAGAAGGTTATGATTTTAAGATAAATTCAATTGGAAAACTAGAAATAATATAACAATTTGACTCTTCGAGACAAATAATAAGTTCCTTGACAT # Right flank : AAATTTTTTAGAGGTCAGTAGTTAGTTACATATAATTTTGTGCTGCTCTACTTTATCCTTTTGAACCATTTTTGTTATTAAGTTATTGAATATTGTTGCTTTACTTTGTGATCGATTAATTCTAAAACAAAATTCATTAAAATATCTATTTAGATTAAAGTCACTTACCCAAGAATACGTTGTTCTTATCCAAGATTTCACCTGATGAATCATTGTATGAAGTGCTTTAAAATTCATACCTCCATTACTTTCTATTTGAGTAATATTATAAGCTTTCGCAATAGGTCTGTAACCTCTCCATTTGTCGGTTATCACTTTAGCTTCTCGACTGATATGATTCACAAAAATATATTGCAAAGAACTAGCTGAAAAATCTTCGATTCTCATGGCATACATTCTTTTAACTTTTCCATCTTCAGTTAGTTCAACAGCAGTTATAGCTTTCTTTTTCTTAGCATTATAACTTCTTCCTACTTTATCTTTTTCTCGTCCACCCAAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //