Array 1 32463-28958 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSSL01000012.1 Eggerthella lenta strain TF05-26B-4 TF05-26B-4.Scaf12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 32462 32 100.0 36 ................................ TTGAAGGATATGGAGAAGCGGGGAGCCGACTTCGAC 32394 32 100.0 33 ................................ AACCGTACGATGACGTTAAGTGCGCCGGTATGC 32329 32 100.0 35 ................................ ACCACCGAAGCTGGTACCAGCGTGAGTGTTCCGGC 32262 32 100.0 33 ................................ ACCGATGGCGACACCTACGGCTTCGTCACCAAC 32197 32 100.0 35 ................................ TCCACGGCTGCGCGGAAGCGTACGCCGAGCGCGAG 32130 32 100.0 34 ................................ ATCGGCGGCTTGAAGGCTGCCAAGAAGGAGGCGA 32064 32 100.0 34 ................................ TTATCGTTGATGGAGTTGCGCGGGTTCTCCCACC 31998 32 100.0 35 ................................ TCCGTAATTGCAAAACCAATCATCGAAAACGATCG 31931 32 100.0 33 ................................ ATGAACGCCAGTTCCTCAGAGGTGGCCTTTCCT 31866 32 100.0 34 ................................ CTTGTAGGAGCGGAGGAACCGGTGCGCCCATCCG 31800 32 100.0 34 ................................ AAGCCAGTCGCGCTCTACACGGTTGACGGCGAGA 31734 32 100.0 34 ................................ ACCGATGGCGACACCTACGGCTTCGTCACCAACG 31668 32 100.0 33 ................................ ACGGTGCTAAACTGGTCGCGCTTGACAACCGCA 31603 32 100.0 35 ................................ GCGAGAGGTTAGCAGTTTGAGCTAAGCCATTCATG 31536 32 100.0 36 ................................ CTTTTAACTCACCTCTTTGGTTTGTCTAAAAGCTCC 31468 32 100.0 34 ................................ AATGAGCTTATTTTTTATGATCCAGTTTGAATCA 31402 32 100.0 35 ................................ GACAATGCCACCCATATGAGCTGGGCTTTATTTTG 31335 32 100.0 38 ................................ ATCGGCGGCTTGAAGGCTGCCAAGAAGGAGGCGAAGGC 31265 32 100.0 35 ................................ TTGCTCATCAAGCCGTATCGGCGCTCCAAAAACGA 31198 32 100.0 38 ................................ TGAACCGTACGTGGTCGTTGTCGATGTTTGCCGCCAGC 31128 32 100.0 33 ................................ TTGAACCCCTTCGCCGTCGCCGGGTTCTTAGCT 31063 32 100.0 37 ................................ AGGAACATGGACGACGCAGCCGTGACCGTTTCTGGGC 30994 32 100.0 33 ................................ GCCCGATGATCGACATCTCGTCGGCTTTCGGGT 30929 32 100.0 33 ................................ CTCTTCGCGCATGCGAAGTAGCTGGCCTTCAGC 30864 32 100.0 33 ................................ CTTTCTGGTCAGTACAACGCCGCTGGCGCTCCT 30799 32 100.0 33 ................................ TTTTAAGGAGGTGAGCCGATGACGAAGGCTAAC 30734 32 100.0 34 ................................ ATGTGCGCGGACACGCTGATTGACTTTGAGAGCA 30668 32 100.0 36 ................................ GCACACACGGTTGATGATTGAATCGGCCCTGCCTTT 30600 32 100.0 36 ................................ TTCTCGTTGATGGAGTTGCGCGGGTTCTCCCACCTC 30532 32 100.0 33 ................................ CAGTTGGACTTGCCGGTGTCGTACTCCGGAAGC 30467 32 100.0 34 ................................ ATAGCAGCGCCCTGGTACTTGCTGCTGCGGCACG 30401 32 100.0 35 ................................ CGTGCAGGACGGACGGAATCGGGGAGTTCTGCGCC 30334 32 100.0 38 ................................ TCCAAACGACGCGGAGTGCAACGGCAAGGCAGCGGGTC 30264 32 100.0 33 ................................ CTTGGAGGCGATCGTAGCCGCCTGCATCACGGG 30199 32 100.0 35 ................................ GTGAATTTCGTCGAACCAGCTACCCCCTAGCAGTA 30132 32 100.0 34 ................................ AAGATTCCCGCTCCGCGGGACGACCGCGAGAAGG 30066 32 100.0 36 ................................ ACGAAAGGAGGTGATGTTCGTCTTGAACGGATTATG 29998 32 100.0 38 ................................ TCCTTTGATAGCGGAACCCGCACCCTCCCGTCGATCAC 29928 32 100.0 35 ................................ TTCGGTCTTGCTCTCCTGTACCTTCTCGACTTTTC 29861 32 100.0 33 ................................ TCCACCTGGGCGGCGGTAACTCCCGACGGCAAG 29796 32 100.0 35 ................................ ATGCGGGCGCATCCACGACAGCCGCGTCAAGTGCG 29729 32 100.0 34 ................................ CCTGGTTCGGTATCGTCCTATCAAGTCTCGAAGC 29663 32 100.0 36 ................................ CACGGGAGACGCGCCACCTACGTCGAAGTTCACCCA 29595 32 100.0 37 ................................ TTTCCGCTTCGCGATTTCGGCAAGCTCGTCTTCGGTG 29526 32 100.0 35 ................................ GCTTCTACGACGCGCTCCCAGAAATCAATCGCTTC 29459 32 100.0 33 ................................ TGCTTCGCCTTGGCGAACGAATCGAAAGCCATG 29394 32 100.0 36 ................................ AACCTCTGCGGTCGTGAGCGCCTGGATGTTGTTCTG 29326 32 100.0 35 ................................ ACCGAGTCGATGCGGCAATAAACACGCCGCCCGGT 29259 32 100.0 34 ................................ CCGGGATCACGGCGAGTGGTGCGTCCTCGATGTT 29193 32 100.0 35 ................................ ACTTCGGCCTCGACCTCGTATCGGTTCTTCCCGAC 29126 32 100.0 38 ................................ CAGCAGCTGGGAGAATGGCTGCGATCCTGCGAGAGCGA 29056 32 100.0 35 ................................ TCGGCGATGTATCGTTCGGCTTCCTCGCTGTCGGG 28989 32 96.9 0 ...............................A | ========== ====== ====== ====== ================================ ====================================== ================== 53 32 99.9 35 GTCGCGCCCCTCGCGGGCGCGCGGGTTGAAAC # Left flank : GCTCGGTTCTTGCGTGGGGATTTGAAGGGCTACCCGCCTTACGTATGGAGGTGATTCATGTATGTGCTCGTGACGTACGATGTGGCGACTTCCGACATCGGAGGCGATCGTCGCTTGAGACGCGTTGCCAAAGTGTGCATGCAGTACGGCCAGCGCGTTCAGAACTCGGTTTTTGAATGCTCGGTCGACCCTGCTCGGTTTGAGATGATGAAGCACGAGCTGATGGATCGTATCGATCCGGAGAAAGACAGCTTGAGGTTTTACCATCTGGGGAAGGGTTGGAGGAGTAAAGTAGAGCATATCGGCGTTAAACCTAGTTACGATCCCGAGGGCTTCTTATGCGTTTAGCGATGCGCGAACCCAAAGCGATGGCGCTCTATTCGTGAGGTTCGCAGACATAGGAACCGGTTTTTAGGCGATCTAAGGTGGAATTGCGTTTAATGTACCTTGATAATCGCATAAAACGAATTCGAATATGCTGAATATTGCATATTTCGACA # Right flank : GGCGACGAGCACACCTAAGAGGGTACTGCGGCACGGTCGCGTCCAGGTTAGCTCTTTGCGCGAGGGTGCGAATTGAAGTTTGGATCCCTAAATGGGCATGCCGCCCTTCGAGGCGTCTGGGTTGAAATCGAGCAGCGTTTCGGCGGGTTCTGTCGCTTTCAAACGAGGGGATAACCGATCCTTGCCGTCGCTTCCTATCGAGAACCCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCCACCAGCCCGCGGTTCGTCAGCCGCAGCTCGGGCAGGCATGCCAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAGGCATGCACCTTCTCGCTCATCGTCACAGCGTCGAGCGAGTCCATCAACCCGGCGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCTCGCGGGCGCGCGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.00,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //