Array 1 715684-718463 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017708.1 Moorea producens JHB chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================== ================== 715684 37 100.0 38 ..................................... AAAATAGTATGGAATGCGAGCCCTGGAGATAATAAAAA 715759 37 100.0 35 ..................................... GGTGTTCAAACCCAATAGGCTGCTCTAAAACCACG 715831 37 100.0 38 ..................................... TGTCGGAGAGGTCATGAGTCTTTCCAAGGTCAATTAAC 715906 37 100.0 38 ..................................... AGAAGGTGGCACGACAAGATGAGTCCCATCCATGGTTT 715981 37 100.0 40 ..................................... TGAAGATTCTATATGGTGATATTCCAACGCAAAGGCAAGT 716058 37 100.0 41 ..................................... TTCAAACCAATTGATTTTATCCAAATCATCAGAGGAGGCAA 716136 37 100.0 37 ..................................... GTCCAAGTGATACGGAATAATCAATCAGTTCTGGTTC 716210 37 100.0 36 ..................................... GAAAGTTTGCTGACTCAAAAAAGCCTTGGTTTCCAT 716283 37 100.0 37 ..................................... ATCCAAGTAGCGGGATAAGAAAAATCGAGAATACAAA 716357 37 100.0 35 ..................................... CCTAGATTGTCAGGGTCAGTGTATTCAGAAGACCA 716429 37 100.0 40 ..................................... CAGATAGTTCGCGAACTTACCCCTATTCTTTCTGCTGTTA 716506 37 100.0 40 ..................................... TTTCATCGAATTGATAATAGTTTTGCTTGAAGATTTCAGT 716583 37 100.0 34 ..................................... TTTCCATGGGTGCTCATACTTGATGTATTTCCCA 716654 37 100.0 34 ..................................... GAGACTCAAAAAGCCTTCCTAGTTTTTCCCGGGC 716725 37 100.0 35 ..................................... AACTGTTTAGGAATTGGGTGCTCATAATCAGGAGT 716797 37 100.0 37 ..................................... GGGATAGCTACGCAAAACCTAGACAGCAGCCCATTGC 716871 37 100.0 38 ..................................... TTTTACTCAGAATTTTGTTTACAAATTGACCAGTAACT 716946 37 100.0 36 ..................................... ATACAGTTGCACGTACTTGTCCAAAGTGTTGGCATC 717019 37 100.0 35 ..................................... GAATACTCCAGGAAACAAAGACATCTTAAACGGAC 717091 37 100.0 34 ..................................... AGGCATATCTCCGCCTTTTCAGCCATTTGGATGA 717162 37 100.0 37 ..................................... TGGGTTGTCAGTGTCATTACATGAGATCCGTACTTAC 717236 37 100.0 36 ..................................... GGTAGGTGTATTTGAGGGCAACGTATCCACCACTAG 717309 37 100.0 35 ..................................... CCAGTCGAACGAATGCAGAGGCAACTTGTCTTTGA 717381 37 100.0 36 ..................................... TTTTGGGTATGCCGTCACTGATTATTTGCCATTCCC 717454 37 100.0 35 ..................................... ATGTAGAGAAAAGGTAGGCAAAATCACACACGAAG 717526 37 100.0 37 ..................................... TGGGTTGTCAGTGTCATTACATGAGATCCGTACTTAC 717600 37 100.0 36 ..................................... GGTAGGTGTATTTGAGGGCAACGTATCCACCACTAG 717673 37 100.0 34 ..................................... TGAGTCTATCAACGAATTCACTCGTTCCATTTTT 717744 37 97.3 35 ............G........................ GTTTAAGACTTCAGACTCCAGCTCTGGATAGAAAG 717816 37 97.3 37 ............G........................ CATTGAGATCAGCGGCACCCCCAATCAATAAAAATGT 717890 37 97.3 33 ............G........................ CTCGGACAGCCTCAGAATATGTGTCGATCGCGT 717960 37 97.3 40 ............G........................ AAACAGAAAACCCCCGGTCACTCTACAGGTGACCGGGGGT 718037 37 97.3 43 ............G........................ ACTCCCGCTTCGATACTGAGTTAACAGAGCGTCTGCTACCGAG 718117 37 97.3 34 ............G........................ TCGCGCTACAGTACCGATAACGCCATTTTTTACA 718188 37 97.3 35 ............G........................ GGTTGGTGGGATAGTGTTCATTCCGTGAACAGCTA 718260 37 97.3 40 ............G........................ TCCAGTATTTGTCGAACTTTGCGTCATGTTTACCAGACAC 718337 37 94.6 53 ............C..................C..... CGCAGATAATTTATAATGCAGAATGCAGAATGTATAATTGAGAATCTAGACTT 718427 37 75.7 0 .....C......C.A..AA.A..........CT...A | ========== ====== ====== ====== ===================================== ===================================================== ================== 38 37 98.7 37 GTTACAATCTCCATTAAGGAGATGAATTAATGGAAAC # Left flank : ATTAAAAGGTTGCTCTAATTGTCTATAATAGTAGTGCGAATGAGGAATTATAGCGCTACGCGCAATGGCATTGGCAAGAGGCAAGAGGCAAAAGTTGACTACAACAGGTTTTGCTGCTTGTATCAATTTCCTAACTTTAATAGGTAGTGCTATAGTATAATGTCAGGAGAATTCTTGCCATTTTCCGGTTCTGACGATTCCCGACTCCCGATTCCCGATTCCCGAGCCAAATGTAAAAAACCTACCCCTGTGAGCCCATCTCACCACTGTCTTGGCGAGGAGAGGTTGGTATGGAAGGTTACTGATTAGTCGATGATGGATGAAAGGTAGGCGGGATGGGGATTTGAGGGGCATGGTTGAGAGAAAGTGCTCTCGCAGTATACAGGGTGAGGGTTTTATGGATTTTGATGTTGACAAGGGGACAAGTGGAGGGGGAAAATGAAGGGGTTCTCGCAATTGTACCTGGAAAACTTTGGTATACAAGGTTTTTGAGGGTCGGA # Right flank : ATTACTCACCCTTAAATACAAAAAAAGTAGGCAATGCCTACCTTTAAAATTAACCGTAACTATAGCGTTGATTATGTCTATTTTAACAATTGATCAATAACCCATTTCCGAATCGGCGTATACAGATAATAATCCGCCTTATCACCAACAAACTTTTGCCGATTATGTTTGTGAACAATACCCAAGTCACTATTACAAATATCTGCCATCACCTCACAGATTTTATCGGCGGGACAAGCATCAGGATTCTCTTCTTTATCGTTTTCATATACATCCTTCATCGTGTTAACAGACATGCCCTGGTTTTGATGAATCATCCGATTACGTTTCTGCGCCCAATAGTCTAGACGTTTCAGTGACGCTAAAAGCTTTTGTCCATGAGTCTGTTTATGGGTGTCTTGGTAGTAACTGACTAAAACCTCAAGGAAATTACTCTTACTGGGACGACCAGTTAACTGAAACAATGGGTCTTTCTTAACCTGATCGGATGTTAACCTTGA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAATCTCCATTAAGGAGATGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.70,-7.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 6386088-6383193 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017708.1 Moorea producens JHB chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 6386087 37 100.0 35 ..................................... CCCTGACGCTTCTTCAACCAAGCTTGGCGTTCCTC 6386015 37 100.0 34 ..................................... CAACAGCGAATATATAGTAGAATCTCTTCAGGAG 6385944 37 100.0 39 ..................................... TGTTTTTTCGTTGATTCTTTGTCGAGAATGAGTAAGGAA 6385868 37 100.0 38 ..................................... TTGCGTTAAATCTGACTCAAAGGAAACTTCTGAAGAGT 6385793 37 100.0 37 ..................................... GTTCTTGCATCTGATGGCGCGTTCGCTGTATAATATA 6385719 37 100.0 34 ..................................... CAGTCGGTGCAGATGGAGGTTTTTCTTTATCTCA 6385648 37 100.0 36 ..................................... ATATCACTTGTTGGGCGGCAAGGCATTAATAAGGGC 6385575 37 100.0 37 ..................................... GTACGACAACCATTGAGCGAGTGTTGATTTTCCGGAG 6385501 37 100.0 36 ..................................... GACTTTGGGATTTGGTTTAGCCATAGAGCTTCTCCC 6385428 37 100.0 37 ..................................... GATTTCTATATCGTACAAATCAATTACCTTCATCTTT 6385354 37 100.0 34 ..................................... TTATGTCAATGCTCACCCCGGTTTCTATGGATGG 6385283 37 100.0 36 ..................................... TGGGACGTTCCACTGCAATACGTGGAGGAAAAAAAA 6385210 37 100.0 43 ..................................... AAAGCTTCTAATTTAGTCTCAGAAATTCCTTTTTTTGCGCTAG 6385130 37 100.0 34 ..................................... AAGCAAAGTCAGACTTAGAATTATTAGCTGACGA 6385059 37 100.0 38 ..................................... CTTGATCGACCGGCATCGACTTTAACATAATCAAACAG 6384984 37 100.0 34 ..................................... GAGACTTCTTTAGATGACTCTGTAGCGATAGCTT 6384913 37 100.0 40 ..................................... ATAAAAAATTGATAAAGTAGTTGATTAATTTTTAAAGAAC 6384836 37 100.0 35 ..................................... CAGTAATCAAAATGTCCACCGCTGGGTTATCTATG 6384764 37 100.0 35 ..................................... TAAGGTATTAAAGTCTGAATCCTCTCGGATGTAAG 6384692 37 100.0 36 ..................................... TAGTCAATCCAGATCTTTCTGTTATATAACGCTTAG 6384619 37 100.0 37 ..................................... ATCCTACGACTTTAATCAAAGTTGTTCTTCAAAAAGA 6384545 37 100.0 37 ..................................... ATGTCATTTTTAGATACGGCCATTTCTTTTTTTTTTA 6384471 37 100.0 35 ..................................... TGCCAAAGGCTGTGCTTCCCAGCGTCAACAGAGAT 6384399 37 100.0 34 ..................................... CAGTTACAACCCCGATAAGTTGAGCTGTTAAGGA 6384328 37 100.0 36 ..................................... TGGCTTTATTCCATTTCGCTAATAATAGCGATTAGA 6384255 37 100.0 36 ..................................... TCTAGGACTAGATCCGAATTTCAACAAAGCCAGGGA 6384182 37 100.0 36 ..................................... GGATGGTGTCCGATCCGTTTTCCCCAGATCGCAAAA 6384109 37 100.0 35 ..................................... GATGACTACTAACCTCAGCGATAAACGATAAAAAG 6384037 37 100.0 37 ..................................... CAGCTCAGCTGAATCATCTGAGTCAGCTTTCTCGTTA 6383963 37 100.0 40 ..................................... TGGTGCTGTTACTGTCACGTTTATCCGGTGGCGCTTTGGT 6383886 37 100.0 35 ..................................... AATACCCAGTCAGATTCGCCTACAGGTGTTCAAAC 6383814 37 100.0 35 ..................................... ACGACAGAGAAAGATGCATATATAGATGTGTCTAC 6383742 37 100.0 38 ..................................... GAAAGAAATCAAACGGGTAGGACCAACTCCCAAATCAA 6383667 37 100.0 34 ..................................... TACTATCTTCTCAGCTCGTTCTGTTTTCAAGTAA 6383596 37 100.0 35 ..................................... CTCGTTAGAAAGACCACTTATTAACAGTTTGGAAA 6383524 37 100.0 38 ..................................... ACTAACTTAAGACCGATATTATTGAGCATGGTGTTAAA 6383449 37 100.0 37 ..................................... CAATGGGATAGGGGATTCCTATTTCCCAGGCTTTTGC 6383375 37 100.0 36 ..................................... TTTGGTAATACTACCTGATTCTATTTGTTCATTTAT 6383302 37 100.0 36 ..................................... TGTCTGCGGAACTCTTAAGTGCCGTAGCGGCAGCTA 6383229 37 97.3 0 ...........T......................... | ========== ====== ====== ====== ===================================== =========================================== ================== 40 37 99.9 36 GTTACAATCTCCCTCAAAGAGATGAATTAATGGAAAC # Left flank : CATCGTTCGCGTAGCGTCTCCAAAGGAGAAGCCTCTCAATTTACTTGGGGAGTCCATGTATCCCGACGCTGAATTAAAAATTACAGCGCGGGACTTATAGCTCCCCAAACCCCACGCCAGTTAAGACCATTTTTTATGATTTTTCGGGGATTTCAGGGTGCCTTGCGTAAGTCCTGACTGGATTGAACACTTCTGGTATAGTATTATAGGTTACTTATGACTGTATATAATTGTAATGATAATCATAAATTAACAGGTTTGGCTTCCTGCTTTGTTGGCGAGGAAGAGTTGGTATGGAACGTTACTGGTGAGTAGAAATGGCTCAAGGGTAGGGAGGATGGGGATTTGAGGGAATGGTTGATAAAAATTCCTCTCGCAGTATACAGGGTAAGGGTTTGAGGTATTTTTAGGTTGACAAAGCGGCAAGTTGAGGGGAAAATTAAGGGGTTCTCGCAATTGTACCTGGAAAAGCTTGGTATACAAGCCTTTGAAGGGTCGCA # Right flank : AAGTACTGCGCCTTTACTTGCCAGTAGAAGGTGATGGACTTGCACGACACCAGGAAGTTCACTCAGATAAGTCCGGACAGCCACAGGATCGATCTGTTTTGGCACAGCATCAAGGGGTAAGTTGAGGGAGTCTTGTAGCAGTTGCCAAGTCCCAAAGACCACTACAATCACAATAATCAAGCTAACCACTGGGTCAAACCAAAGCCAGCCGGTTGTGAGAATAGCAATGCCAGCCAGGACAACACCAACAGACACCAATGCAAAATGCAATATTCAAGAGTGGTTTAAGCGATGCATCGCTTAGTCTATCAATCCTATGTTTACATCTCAAATAAAAATGCTATTGTGTTTTTCATAGCTATGAGGTACACATAATTTTTGCCCTATTCCCTATTCCCTGTTCCCTATTCCCTACCTATTTCGTGAGCGCTGCCCTATAACCCGTCGCCGAGTCTGAAACCACATAGAAATACCTGTAATTGCTAAGGTTAATAAACCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAATCTCCCTCAAAGAGATGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //