Array 1 25811-24653 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZUC01000025.1 Neisseria meningitidis strain Neisseria meningitidis isolate B189, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 25810 36 97.2 30 ........G........................... GTTTCTTCCCATATACTGCTGTTCAAACCG 25744 36 100.0 30 .................................... TCATCAATCGCCCACTCAAACCCAAGCATA 25678 36 100.0 30 .................................... ACGGCGGTGGAAACGGTTTTCATAAAATTT 25612 36 100.0 30 .................................... GCCTCACAAATATCGTCAATGCTTGCGCGA 25546 36 100.0 30 .................................... TGCCACTTGATGTTTTAGCCATAGTGTTCT 25480 36 100.0 30 .................................... TGCGAAGCGAACACCCTGAACAATGCCGAC 25414 36 100.0 30 .................................... CATGCCGTCGGGCGGTGTTGTAAATTTTAA 25348 36 100.0 30 .................................... TGACAAATAAAGCACGATTGTTGCAAAAGG 25282 36 100.0 30 .................................... CCAACGGATAAAATTACGCCCAAGCACCTG 25216 36 100.0 30 .................................... GTATTGAGCGTCAAGTACTCGCCATTCGAG 25150 36 100.0 30 .................................... TGAAGGTTCGATAATTCGACCTGAAAAACG 25084 36 100.0 30 .................................... TCACTCTAAAAATCCGATTCTACCACCGCT 25018 36 100.0 30 .................................... TTGGCTCGTCTGCTGCCGTCAATCGTGCGC 24952 36 100.0 30 .................................... TAGATTGCCTCATATACGCCGAGCGGGTAG 24886 36 100.0 30 .................................... CAGGTCGTGCTGGAGCAGGCCGACGATTTT 24820 36 100.0 30 .................................... TAAAGGCGAAAACATCGCCGCCTTCTTCTT 24754 36 100.0 30 .................................... TGCCGAAGCCGACATCGCCGCACACAAGGC 24688 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 99.8 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : CCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCT # Right flank : ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGCTGGAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATCGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACACCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //