Array 1 1288471-1288956 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP032699.1 Streptococcus pyogenes strain TSPY155 chromosome, complete genome		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence          	Spacer_Sequence                           	Insertion/Deletion
==========	======	======	======	=========================	==========================================	==================
   1288471	    25	 100.0	    40	.........................	GATGTTAAAGATTTAAAAGATATGATGAGAGGTATTTCAA  	
   1288536	    25	 100.0	    42	.........................	GTGAGGTAAGAGAACTTAAAGATATTATGAGAGGTATTTCAA	
   1288603	    25	 100.0	    41	.........................	TTAAGCTTGATTATATTATAATCCGTTTTAAAACATTTCAA 	
   1288669	    25	 100.0	    41	.........................	GCAGATATTGTTACAAGTCAAGTCTATTGATGATATTTCAA 	
   1288735	    25	 100.0	    40	.........................	TTTATTGACTTTTTAAACTTTTTAGAAGAGTGTATTTCAA  	
   1288800	    25	 100.0	    40	.........................	TTTAAAAGTTATTTCAGATTTAAAAATCAGATAATTTCAA  	
   1288865	    25	 100.0	    42	.........................	GAGGATGCAAAATCAAAATTAGATACTAAATTTAAATTTCAA	
   1288932	    25	 100.0	     0	.........................	|                                         	
==========	======	======	======	=========================	==========================================	==================
         8	    25	 100.0	    41	TCCACTCACCCATGAAGGGTGAGAC	                                          	       

# Left flank :   TCTTAATGGTAATGAGGCCCATCTGATGAATCCCCAAGATAATGACCAAGGCTCCCAGGAAGGACCGAAACCATACCGCATAAAGGATATTTCCCAAAAAACCAGCCCCATAACCTAAAATCACAAAGATAGTGGATAACCCAAAAATGAAGGCTAAGGTCTTGACAATGCCATACCAATAGAGTTTTTTACCAAATATAGTAATCGTCTTTGAATCATCTGCATCCAGTAAAATACCTAAATAAACAGGAAGGACCGGAAAGATACACGGAGAGAAAAAGGATAACAAGCCTGCCCCAAAAACCGATACCATTAATACAAGTGATAGTGTCATAAATAACTCCTCTCTTAAGTTACCCTTAGTTTACCGAAAGCTAGTGGCGCAAACCATAGACTAGAACATGCAAAAACTTGAATTTGATACGCTATCAGATAAATGGTTGACTAAAGGCATGTAAAAACCCGACCTCATTAAAAGAGAGGTCGGATTCATCTTTCAA
# Right flank :  CTGCGCCAAATGACACAGTTTATAGAGAAACGGATGGCACACATAGAGGTGTTTTAAGCCTTTTTATCTCCATTTCGCTTCTTTTTTAAGTTATTTTTGCGCGAGCAAGCAAGGTTTTTCTGTGAAAGCTAGCTTCGCACAAGAGATTTTTACAATAATAAGACACCTTTATCTGGGTCATAGCTGTCTGAGCGACCAAGTGTTTCCACACGCCTCTGCCAATTTTTCCCCAATAAATAAAAGCGAATACTATCAGTTTTCTCATCAATGATTTGTGTTAAGCGGTGCTTTATATCCACAAATTCTGCGGGTGTCACAGAACATTCAAAAACAGAATTTTGAACACGTTGCCCATAGTCCACACAGAGTTTGGCAACATGACGCAATCTTTTTCTACCAGCAGGTGTTTCCGTATTTACATCATAAGTGACTAAAACCATCATATAACATCTCCTAAACCATAAAAGGTGGATAGCTTTCTAAATCTCCTCGTATGGCCT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCCACTCACCCATGAAGGGTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0.37,0.37   Confidence: NA] 

# Array family : NA
//