Array 1 190569-186507 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJNBJ010000018.1 Nitrospira defluvii isolate Candidatus Nitrospira sp. ZN2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 190568 29 100.0 32 ............................. ATGATGATACGGATCTGGATTTCAAAATCACA 190507 29 100.0 33 ............................. GGGCTGGATCTTCGTGGGGAGATTTCCCTACTG 190445 29 100.0 32 ............................. GCCTTGACCTATACCTTTTCATATACGCCGCC 190384 29 100.0 32 ............................. CATGAGGCGATCCGGTGGCAATCTGGCTATAT 190323 29 100.0 32 ............................. GCATTTACCGGATCAATGATGAAGGCAACGCC 190262 29 100.0 32 ............................. ATACCACCACGCATCTCGGCATCTATCACAAC 190201 29 100.0 32 ............................. CCGTTTGTTTTCTTTCCTGAGTGCGTCCGACT 190140 29 100.0 32 ............................. GTGCCAGCCGGGAAGCAAAGCATGTCGCCGAG 190079 29 100.0 32 ............................. CCGCCAGAAAAGAATCCCACGATGAAGCAGAC 190018 29 100.0 32 ............................. TTGCAGGCCCCCGGAATGTTAGGCCACGCAGA 189957 29 100.0 32 ............................. ACCGCCGTGGAACTGCCACGTGAGCCGTTATC 189896 29 100.0 33 ............................. GGCATCCACTCCGGCGCCATGCTGCCATCCGGC 189834 29 100.0 32 ............................. CCATCGACTACTTCTCGTCCATCTTCCGTCAA 189773 29 100.0 32 ............................. ATACCGGTTGAGTCGCTGGCAATGGTGACGCG 189712 29 100.0 32 ............................. TCCTGGTCGTCCACAATCCTCAACATAATGTC 189651 29 100.0 32 ............................. GTGGCTTCGAACTCGGCACGCCGGGTGATGGA 189590 29 100.0 32 ............................. GCACGTATGGCAGTGGGCACTCCGGCGCCATC 189529 29 100.0 32 ............................. GAGAGACCCTATGTTGTTAGAGCGATTACTGA 189468 29 100.0 32 ............................. TCTCACGATTTTGAGGTGTTTTGGGGGGATAC 189407 29 100.0 32 ............................. CCCTTCCTTGCCAAAGATGGGGCGTTTATCTA 189346 29 100.0 32 ............................. CCCCTCATGTTGCTGCGTTTTACGTGGAGCAC 189285 29 100.0 32 ............................. TATGCGGATGATCAATCGGTGTTTGGTTTAGG 189224 29 100.0 32 ............................. ACCCCATGGTGACCAGCACGCTCGTAGCCAAC 189163 29 100.0 32 ............................. GATCGCAGCCTGGAGCCAACGCTTGTGAAACA 189102 29 100.0 32 ............................. ATTTCCCCCATCGCTTCAGCGGAATAGCCCGC 189041 29 100.0 32 ............................. GTTGGCGCACGGTACGTATTAAAAATGGCCGC 188980 29 100.0 32 ............................. GCCACGGTCACTTCGGTTTTAATCAACCCACC 188919 29 100.0 32 ............................. GCGGTTGGCTGGGGTAGTGATGGCGCGATCCG 188858 29 100.0 33 ............................. TCCTTGATGAGCGAGTCGGAGATCGATTTATCC 188796 29 100.0 32 ............................. CGATGGATCAGTTCGAGAAGCGGCCAGCCAAC 188735 29 100.0 32 ............................. CGGCTTCATTTTCCATGGCGCCTCACTCATGC 188674 29 100.0 32 ............................. ACCGACCTGCTCCCCACAGGCTTTGAGGTAGA 188613 29 100.0 32 ............................. TCATGTTCTAGTTCAATGGCTTCCTGTGAGTA 188552 29 100.0 32 ............................. CCCACCTTCATTGACTGGAAGGTCAAGAACAA 188491 29 100.0 32 ............................. TTGTTCTCCGCTTTCCCGTTAGTCGTGTCCAC 188430 29 100.0 32 ............................. CGCACGACGACCACCGCACGGCGCTCGCCGAT 188369 29 100.0 32 ............................. TTGGTGAGTTGATCGATCAGCTGAAATATGAT 188308 29 100.0 32 ............................. GCGGCCTACAACTACCTAGCCGCCCACCCTGG 188247 29 100.0 32 ............................. ACAACTATCAGGGCATCCGCACCGGCCAGCGC 188186 29 100.0 32 ............................. CTGCAACGCGCTTCTGGCCCTCTTCTGGCTCG 188125 29 100.0 33 ............................. TGGACCTCCTCTGGAATCACGATCCGGTGGAAA 188063 29 100.0 32 ............................. GGCTGTGGGCTTATGATCGACCCACGCCACCC 188002 29 100.0 32 ............................. CGCACCGCCTTGATACGCCGACCGCGCGACGC 187941 29 100.0 33 ............................. CCAGCGGGATTATGGGACCGTCCGGCGTGTTGC 187879 29 100.0 32 ............................. GAGAATCGCCAGCTGATGTGCCTGCTCGACCA 187818 29 100.0 32 ............................. AGGTACTGCTCGGGCTCGATGACGCCACGCTC 187757 29 100.0 32 ............................. TCATCAACCTGAAATCGTAACCGAGGCACAGC 187696 29 100.0 32 ............................. CCGCAAATCGTCGGCCATGCCGCCGTGTTCAA 187635 29 96.6 32 ............................A GGTACATACACGGTGAGGTCAGGATTGAAGGC 187574 29 100.0 32 ............................. GAGGTCACCCGAACCGATGCGATGGTGAAGGT 187513 29 100.0 33 ............................. TCGCCATTCTTTCTTGCCTATCGTCATGGGTGC 187451 29 100.0 32 ............................. ATCCCCCCGCAGCTGTGTGATAGCCTGGTCGA 187390 29 100.0 32 ............................. TCCCGACCGCCCCATGCGACAGCGCCGGAGCG 187329 29 100.0 33 ............................. ACTCATGGGCACAGGACCCCGAGACGGGAGAGC 187267 29 100.0 32 ............................. CCGATCAGCGGCGCCGTCACCATCTCGGTGAT 187206 29 100.0 32 ............................. AGGGGTGGGCCGCTGTAGACGTTCCATTTCAT 187145 29 100.0 32 ............................. TATACCTCGGAGTGTAAAGAACGTCTACAGAA 187084 29 100.0 32 ............................. AGGCGATGCGCGAGTTCAAGCCAGGTCTTGCC 187023 29 100.0 32 ............................. GAGCAGCTCGACCTGCAGCGCGAGCGGTTGGA 186962 29 100.0 32 ............................. ATTCGTCATACATTATCAATGAACTGTATGCC 186901 29 100.0 32 ............................. GTGACGTCATGTGTCACGCCGACTAGATCCCC 186840 29 100.0 32 ............................. TCGACGATCTGGCGGTGCTTGGGATTCATGGC 186779 29 100.0 32 ............................. GTGATATTGCGATTCCCGAGAATATTGCCCTT 186718 29 100.0 32 ............................. TTGACCGTGTTCGCGCCAGTCGTCGCGATCGC 186657 29 100.0 32 ............................. GACCTGCAAATCGTTTCGCCTGAGTGGATCAC 186596 29 100.0 32 ............................. CTCAACGAGCCGATTACTGAGGCTGAGGCGAT 186535 29 96.6 0 .........................T... | ========== ====== ====== ====== ============================= ================================= ================== 67 29 99.9 32 GTGTTCCCCGCGCGAGTGGGGATGAACCG # Left flank : CATCATCCCGGGCATTGAGGAGATGCTGGCTGCGGGAGAAATTCCTCGCCCTACGCCGTTCGAAGAGCAAGTGCTTCCGGCTATTCCGAATCAGGACAACATCGGCGATGCTGGTCATCGTACTTGAGAATGCGCCGCCGCGGTTGCGCGGGCGACTGGCAGTCTGGCTCTTGGAAATCCGGGCAGGGGTGTACGTCGGTAACTATTCGGTTAAGGTGCGGGAGCATGTGTGGAGCCAAGTCGAAGCCGGAATTGGAGAAGGCAATGCTGTCATGGCCTGGCGTAGCAATAACGAAGCGGGATTTGATTTTGTGACGCTTGGCACGAATCGTCGAATTCCAGTGGAGCTGGACGGCGCAAAACTTGTTAGTTTCCTGCCTGAAAGTGGAAGCGCGCCGGAGTCCTCGCAGCCCTCTTCGTAAGATCTCCAGGTTGTGAATGTGGTCGGTAGATTTTAGGGACGTGAAATTGTCCTGGTGCATCAATATTTTGTAGGAAGT # Right flank : GAGACATTGGCTGATGATCTTAGAACCGCATTCTCGGATTTTGGGAGGCGAAACGCTTACTCCGGAATGGCTTAGCGAGGTCGCATCCAGCCTCGCTAGTGATAAGTAGCGTGCACATGGTCTTATGCTGCACCCAAGGAGTTCTAAAGGCGGCCGGACCAGCGTAGGTTGGTGTCAACCAAACCGGCCGAAGGCCAGCGAGGGGCTTCTACAGAGGGGATCTCAATTTCTTGAGGAGTGTTAGATCTTCGATGCTTGCGAGGTAGGTGCTGATCGCATCCTTGATATTCTCCAAGGCCTCCGCTTCGGTCTCGCCTTGTGAGACACATCCTTTTAAGGTTGAACAGGACACGACATATCCTCCTGCCTCGGGATCTGGTTCGATGACGATCGGATAGTCCATGCGGCCCTCCCTGATTCGGACAGTGCCGGTCATCATAACAGACTGCCTGATCCATGCAGGCGTTGATGGTACTGTGCCGGCCGCAATCACTTCATGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.40,-11.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //