Array 1 77058-76890 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNJK010000005.1 Eggerthella lenta strain J1101437_171009_A1 NODE_5_length_211713_cov_57.4263, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================= ================== 77057 34 100.0 33 .................................. AGCTGCATCTGGGGGTACATGAGGCATGCCGAC 76990 34 97.1 33 ............C..................... CTCGAAACCTCCGCCCGATCTCTAGGGGCCGGC 76923 34 97.1 0 ......T........................... | ========== ====== ====== ====== ================================== ================================= ================== 3 34 98.1 34 GTCGCACCCTCATGCAGGGCGCGGGGATTGAAAT # Left flank : GAGGGTCGCGGCAAGCTCAAGATGATGCGCATCTGGAACATCTACTGCTTCCTGTGCTGGTACGAAGTGTTCTTCGGGAAATCGAGCGAGCAGCTGAAGCCGAAGACGCAGGTGGCGTAAAGCGAGTACGTTGGGATGCGCGAACGCTCGCGCTCCTTCCTGCCTGCTCGTTCATCGGCTTTTTCCCTGCTCGTTGATTGCGGGGGAAGCTTTGGCTCTGGCGATGGTCGGGCAAAGTATCAAACGTCGACAATCTTTGTTCAGTAGGCACCCTTTTCGTTGCATTCGTGATGACGGCGGGGGCCTTCTTTGCGAAGAGCGGCGGCGAAGGATGCTGCAAGTTTGGCCGAGCGCGAATCGAAAGCGAACATGATCGATGCGGGAGGTTCGCACCCGATGCGGGATCGATTCGATCGTCGAGGTTAAGGCAGTGCGGTTGGCTACTTGCGCGGAATGCAAGATATTGTGCTCGATTCCTTCTCTATGCCATAATCATTGCG # Right flank : ATCGACTCGTAGTTGAGAACCTCCGTCGGCATCGGCCGGAGCGCGCGCTTCGCTGTGGGTGTACGGTTTCCACTCTTCGTGTGCAGCAAAAACGAGGTTTTGGCTGTCTTGACCGCTTGGGACGACGTGTTTTCGAGGTCGGGTGCCGTGTTTCCGGGGCGCGGTCGAGTGTCATCTGGGGTTTTGCCGCGGTGCCGTCTCGGGTGCGAGGACTCCTCGTGCCAAAACCTCGTTTTTGCTGCACATCGCCTTGTGAAAACGTGCGGCGGGGCATTTTTCAGGCAGCTGTGGGGGCGGGTTGGGCGCGAAACGGCTCCCATGACAATCGCAAGGCGGCTTCGACCTGCTTTGACGCGCCTTATCGCCTCATGCGGTCGTATGATCCCAGGTGACGAAATCCACGTGCGACCGTCGATACCCGACTCGACCGCCGAAACTGTCATAGGAGCCGTTTCGCGTCCAACCCGCCAACCGCCCGCCAACCCGCCAACCCGTCGACG # Questionable array : NO Score: 8.57 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTCATGCAGGGCGCGGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCATGCAGGGCGCGGGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.10,-7.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 72811-76399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNJK010000013.1 Eggerthella lenta strain J1101437_171009_A1 NODE_13_length_100126_cov_54.2144, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 72811 33 100.0 36 ................................. GAGCGGGACTGCGCCGAGGCTGTCTACGACGCCAAC 72880 33 100.0 32 ................................. CCAAGCAACAGGTCTCCCAAGCCGAGATCGAC 72945 33 100.0 36 ................................. CAGCGGCGCTGGCATGGATTATTGCGACTTGGGCAC 73014 33 100.0 33 ................................. CGAGGAGTTTCGCCCCTATCGCGATCCGTCCGC 73080 33 100.0 35 ................................. TTCCTGCACGCAGAGGGCGGGCCGCGCACGTGGTG 73148 33 100.0 33 ................................. TGCACACCCTTGCCGAAGATGCTCAGCATCGGG 73214 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 73282 33 100.0 34 ................................. TCGGCAAATCTGGGACGCTGGAAGCCGCTGAGGC 73349 33 100.0 35 ................................. GAGCTCAAGCTCAAGAAGTGGCGCAAGCAGACCTC 73417 33 100.0 36 ................................. CGGATCGTACAACACGGCAAGCGCGCTGTGGGGCGC 73486 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 73556 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 73622 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 73688 33 100.0 32 ................................. GAGTTCGTTACCGACACGACCGGCCTCATCGG 73753 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 73820 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 73887 33 100.0 34 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATT 73954 33 100.0 32 ................................. AGCCCTCGCTCGCAGCCTCGTAGCGAAGCCTG 74019 33 100.0 34 ................................. AGCATCTCGAATTTCGCGGCGAGCGATTCGTTGC 74086 33 100.0 35 ................................. AAGGCCGCCAACGCCAAGTACAGCCTGGAGGAGAC 74154 33 97.0 33 ........T........................ AAAGCAGTCATCACAACGAGAGAAAGGGGCATC 74220 33 100.0 34 ................................. ACGTCGTGTCTGAGCATCGACATCACAACGTCTT 74287 33 100.0 32 ................................. ATTGCCGTTTTTCAAGGCTGGTAGCAAGCAAG 74352 33 100.0 34 ................................. GTGCCGGCAGCTCCCGCAGCAGCGGCCCCTGCGG 74419 33 100.0 33 ................................. AGGTACGCGCGCGCCCTTCTCGGTCTTGTAGTC 74485 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 74553 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 74620 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 74687 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 74754 33 100.0 35 ................................. GACTTGGCGTCGGCCGCGGCGCCGGACAGCGCCTC 74822 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 74888 33 100.0 35 ................................. CGCTCGCAGCATAACGAAACGTTGGCTACAGCCGC 74956 33 100.0 35 ................................. ACGCACTCGTAGACGTCGGCCGGGGTGTAGCAGTC 75024 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 75093 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 75160 33 100.0 33 ................................. CGCGCCACAGAAGGCGCACCTTGCGGGTATCGG 75226 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 75292 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 75360 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 75427 33 100.0 25 ................................. AGGCCCTGTCGGCCCGGTCGGCCCT Deletion [75485] 75485 33 90.9 34 ...GGC........................... ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 75552 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 75618 33 100.0 35 ................................. TAACAGACCGAAGCCCGTCCGGGCGGGTCGAATAC 75686 33 100.0 35 ................................. CATGTGTTGCGTCCTACCGCGTCACTGATGATGCC 75754 33 100.0 34 ................................. ATCGTGTGCGGGACGAACGACGACAAGCTGGACG 75821 33 100.0 34 ................................. GAGGACGGTGTGGATCCATTACGACATCACCGGG 75888 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 75958 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 76027 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 76093 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 76159 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 76230 33 90.9 36 ..T...T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 76299 32 93.9 34 ..............-.................C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 76365 33 75.8 0 .....GTT.A..T.....C.C..........G. | T,C [76369,76381] ========== ====== ====== ====== ================================= ====================================== ================== 54 33 99.0 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCGGCGATCTAGATGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCG # Right flank : TCGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //