Array 1 336995-334952 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKMC01000003.1 Actinomyces sp. UMB0138 ERR1203646.17957_1_58.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 336994 29 100.0 32 ............................. TGCGATTCGTAAATAGGAATCGGGCGCGGCAC 336933 29 100.0 32 ............................. AATGCAAACCTGGCCAATACCAACCCAAACCG 336872 29 96.6 32 ............................T TCACAAAAGGGGAATGATGTCGGAACAGTATT 336811 29 100.0 32 ............................. ACTGGAGATTACCCCCGGCGACTATGAGATTG 336750 29 100.0 32 ............................. TACTTTCAAATCTCAAGCCTATACATCACATG 336689 29 100.0 32 ............................. CATGCTGCCCCAATACCGACCACAGGCACCCA 336628 29 100.0 32 ............................. AAAAATAATATTATAAAAAAGAAGGGGTTGAA 336567 29 100.0 32 ............................. ATTTTATTATGGGATACGCGTATAACACTAAA 336506 29 100.0 32 ............................. TATCGCGCAGATTATTGCCGCCCTTTTAGGCT 336445 29 100.0 32 ............................. ACTCGAATACGAAGTCATTGATGAGGCCGCGT 336384 29 100.0 32 ............................. AGGCAAGAACAGGCAACCCAAATAGGTTCACT 336323 29 100.0 32 ............................. GAAACGCTACCCCATCGTTGACAGTCTCGGCC 336262 29 100.0 32 ............................. AATGTGAGGGTGGCACAATCCCCGCCCCCGTG 336201 29 100.0 32 ............................. CCCCTTCCGCCGATACGCAGAAGCACGCTATG 336140 29 100.0 32 ............................. GGGGTCGACATTCCCGGCCGCAAGGCGAGGCC 336079 29 100.0 32 ............................. TTCCGTGGCATAGATGGAGTGATGAATGCCTT 336018 29 96.6 32 ............................T ATCGCCGACTTGGACGAGGGTACTGCGTTGAG 335957 29 100.0 32 ............................. CGGGTGCAGGCGGGCGAAAAAATAGTTGTGGA 335896 29 96.6 32 ............................T GGTAAATGCCTTGGATGCTTAAAAAGTTTATG 335835 29 100.0 32 ............................. GCTGCCTCGCAACGGTTGAGCAGCTGCTCGAG 335774 29 96.6 32 ............................T GTTGCTAATTCCAGGCCCTGTACAGGCAGGAA 335713 29 100.0 32 ............................. ACATGCTCATGTCACCGGCGCGAGCATACATA 335652 29 100.0 33 ............................. GCACATTCACGCACATTCGGCTTTCGGGCTTTT 335590 29 96.6 32 ............................T GTTTATTTCTATGCCGTTTTGCTCATACCAGT 335529 29 100.0 32 ............................. CTCCATGCCACGCTACCCGCAGCTAGGATTTG 335468 29 100.0 32 ............................. AACTACAACAACGGCACCCCGCCTTTGGCCCA 335407 29 100.0 32 ............................. ACAACAACACCAACAGCAACGACGCAACCGAG 335346 29 100.0 32 ............................. TATTAATTTGCTGCCCTGCCTCATTAGCGTTT 335285 29 100.0 32 ............................. CCAGCAAGCGGGAGGGGGGCATTTATGGGCAG 335224 29 96.6 32 ......................G...... CCAGCCCCTCAACCCCTCCTGGTAATCAAGGA 335163 29 100.0 32 ............................. CAAACCCTCATCCTCTCATTCAGCAGAGGCAA 335102 29 100.0 32 ............................. TTCCGCCCAAACTTCTCTACCGTGCAAGTAAT 335041 29 100.0 32 ............................. GCTTCTTCGCGCCAATCACGCCGCGCCCCTTC 334980 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.4 32 CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Left flank : GGTGAGGGCGCCTCCGGCAGCAAGGACGGTTCCACCGGTACTGACGAGGGCGACAACACTAGCGATCCCGGCGCGCAACCCGGCACCGAGCCTGGAACGCAGCCTGGGGCAAAGCCTGGAAGCCAACCCGGTGCAAAGCCTAGTTCGCAACCAGGTGCTCAGCCCAGCGGCGAAGGCAAAAACGCTGGGGGCAAAAACGGCGGCAAGTCTGATGCGGAACGGCAAGCGAGTGAGCCAAAAACAGTCGGCTCGTTCATAGCGACAACTGGAGCGACAGCTTTAGTACCCACTCTGCTAGGAGCCATGGCAATGATTAGCCTGGGCGCAGTTGCAAAACTAAGCCGCAAAAAGAACTGACCGAGGCTAGCGTCAGGGGCTGAGTTGGAGAACTCAGATGGTGCGTTACTAGGCATAGATACGCACCTTGCAGGCGGCAGACTGTAAGATAGCTACCAGCATGGAAGAATGATACAGACGCCCAAAAGCGCAGGTCATTTAGA # Right flank : TGAGCTCAGAGCAGTCTCGCCAGCAGGTCCTTCTATTCCCCGTGAGAATGGAACAGGGAGAAATTCGATAAATGTTACTCGACCACTGTCGAGTGGCGTGTCACGTGCAGCTCAGATACGTGTAGGAATAATCGTTTAATATGTCATAGCCGTTTCTGTAGCTGTTGCATTTAGTTGCAGTAGCGGCCATTCTTATCTACACCTAACCCTATTGGTTTCAGGCTATTTAAGGACGCTCCCTGCCGTAAGTAGCATGCCCCGTGATTGATTAACGTAGGGGACGCGTCAGCAATCATTCCCGAGTCTTTTAGGCGTTAGAGCTGCAGTTTTTCCTTCACACTTGCGTACCATTGTTCTCGTGTGCCAACAGTGGTGAATTGCTGGCGTCTAGGTGCTAATTCCTGTCCGGGAACATAGTCCTTTATAGTGGCGAACCGTTCTTTAAAGTTGCTGTTCGTTACGAATAGTGGCAATTTCGCGAAATCTTTTGTGGGCCCTAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //