Array 1 231261-232742 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEQT010000002.1 Coprococcus sp. CLA-AA-H212 NODE_2_length_427351_cov_36.289770, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 231261 36 100.0 26 .................................... ATGTAGGCGATGCGCTGGATCGTGCC 231323 36 100.0 27 .................................... GAGACTGGAAAGTAGTTCATCATCTGT 231386 36 100.0 28 .................................... ATACAACAGATTATGTAAGTATTACAAG 231450 36 100.0 27 .................................... GAAATCACGGTAACGAACCTTGTGCAC 231513 36 100.0 27 .................................... CTGATGCTGACAAAGTGACAACCGATG 231576 36 100.0 26 .................................... GAAACGTCATACTGTGCCTTGTCAGG 231638 36 100.0 26 .................................... GTTACAGAGACGTCGTTGTTATTTGG 231700 36 100.0 27 .................................... TAATTGACTGCCATATAGTCCCTGTTA 231763 36 100.0 27 .................................... ACTTCAATGTTCGATAGTAAAGGCGAT 231826 36 100.0 26 .................................... CTTTAAATAAATATCTATCTTCCATA 231888 36 100.0 28 .................................... TGAACGCCAGCAATAGTAACACATAGTT 231952 36 100.0 27 .................................... TTTAAAAGAAAAAGGAACATTATGCTT 232015 36 100.0 26 .................................... CTCGTTCCACTATCACAAGCATAAGC 232077 36 100.0 30 .................................... CAAAGGGTAAGTACAACGGTACATCATGGG 232143 36 100.0 26 .................................... AAGTTGGCTTCTTGTGATCCTGCGGA 232205 36 100.0 27 .................................... CTCTCATATAAGGACATGATTATTTCG 232268 36 100.0 26 .................................... TTTACCCAAAAGATACAAACCACTAT 232330 36 100.0 26 .................................... GAAATGACATGGATGTGCTTGATTTT 232392 36 100.0 26 .................................... CAAGACAGAAGCCGGTAAATGGGATG 232454 36 100.0 27 .................................... TAAAGAAGGTTCCGAACCCTCCAAAGG 232517 36 100.0 27 .................................... CTAAATATTCCCACGACCATCAAAAAA 232580 36 100.0 28 .................................... GATACACTGCCTGTCACCTTACCGCCAC 232644 36 100.0 27 .................................... TCATATAACATAGACATATATATATAA 232707 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 100.0 27 GATTGAATAACCTTAAATAATTTCTACTATGTAGAT # Left flank : CTTTATGTTCAACAATATTATCGTTTCTTTATGAAGATGAAGAGTGTGGAAAATATGCCATTGTTTTTGTATGAATGAGAGGGGGGAGTAGTATGTTTATTGTTAGTTACGATATATCAAACGATAAGTTACGAACAAAGTTTGCAAAGTATCTTTCCAGATTCGGACATAGGTTACAATATTCGGTTTTTCAGATTGACAATAGTTCGAGAATCATTGATAATATTATACAGGATTTAAAAAATAATTTTGAAAAGAAATTCACACAGGAAGACAGTGTGATGATTTTTAAATTATCATCAAGTTGTGAGATTATCCGATTCGGTTATGCAAAGAATGATGAGAAAGACTTTTTCATTATCGAATAAGGGAAATTGCAAACCTTGGTCTTTATAAAGAATTATATTAAGGTTATTCAATGATAATGTACAGAATAAACAAAACAATAATTAAAAATAAGGTATTTAATCAGAAAATTTGTTGATAATGACAAAGTTAGG # Right flank : TACCTATAGAAATATCCATCTACAGAATCGCATACATCCCCATCAACTCAGCCAGAAACACCACATTGACAACCGTAAACCATAGAAAATATTTCCCCTTTTTGCCCGGATATTCCCGGGCAATTTGCTTGTAGGAGATCAGGCTTGCCATCGAAGCGATGAGCGTGCCAAGTCCACCGAGGTTGGTGCCGATGATAAGTGCCTTGTAATTCGTTGTAAATCCCGACAGCAAAAGGGCAGTTGGCACGTTGCTGATGATCTGGCTGGCACCGATTGCAATGTATGTTTCCCGTCCGGTAATGATGCTTTCTAGGAAAGATTGGAAAGCTGGGACGCGCTCCATATTTCCGATGAATACGAAGAATCCTATAAATGTGCCGAGCAGTGCGTAGTCCACGTGAAGCAGAGTTTTTCGCGACACAAGCAGGAACAGCACCAGAATGATTACGAACAGGATGCGGATGTCCAGAAGCTTTGCGACATTTAACAGGCATAGCACA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTGAATAACCTTAAATAATTTCTACTATGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 242880-243691 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEQT010000001.1 Coprococcus sp. CLA-AA-H212 NODE_1_length_736196_cov_33.767926, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 242880 30 100.0 36 .............................. TCAATACCGCATTATCAGCTACGAAGCTAACAACCC 242946 30 100.0 38 .............................. CTACACTTTTACCTTGTCAACTACTTTTTTCGCGTTTT 243014 30 100.0 34 .............................. TTTTGTTTCTTCATTGTATGTTTTTGCTTGTTGG 243078 30 100.0 36 .............................. CATTTAATTCCTCTGAAATATACGCCACTAAAACAA 243144 30 100.0 35 .............................. TCACTTGTCATAGTAGCTCCTTTCCCGGCTGTCTC 243209 30 100.0 35 .............................. ACTACAACCACAAAAACAAAAATATCCGCAAAACT 243274 30 100.0 36 .............................. GTAATTGCGGTAATCGTGGTTTTTATCTGCAGCTTT 243340 30 100.0 36 .............................. TCATTGTATATCCAAGCGGGTATGAGCAGCTTGAGA 243406 30 96.7 35 .................T............ ATCAGCGTGATCCAGTGACAGCCGCCTCCTGATAC 243471 30 96.7 36 .................T............ ACAGGAATCAGACCCGCAACGAAGAACACCATAAGC 243537 30 96.7 36 ...............C.............. AACAAAGCTGACATAGATGTGATTGATTATATCTTC A [243547] 243604 30 76.7 27 ..................AAT...A..GCT ACGGAAAGGGAATTTGAACCCTCGACA G [243626] Deletion [243662] 243662 29 76.7 0 C....A......T....T..A...-....T | T [243688] ========== ====== ====== ====== ============================== ====================================== ================== 13 30 95.7 35 GTATAGATTTAACCAGAATGGAATGTAAAG # Left flank : ACCGGATTTGAAATATGGTGGTAGGAAAGGAGCGATTGCTCATGTATGTTATTCTTGTTTATGATATTGTCACAGATGATGCAGGAAAAAAGATTCTCCCAAAAGTATTTAAGATATGCAAAAAATATCTGACGCATATCCAGCATTCGGTGTTTGAGGGCAATATCAGTACGCCTAAAATAACAGCTCTGAAGAATGAATTGAAGCAGTTTATCCGCAAAGATGTGGACTCCGTTATTCTCTTTTCCTCCCGTGATGAGCGATGGCTGAAAAAGGAATTTATTGGGCTTAATGATGATAAAACATCCCGTTTTATTTGATTTGTCGATCTGAAATATCGAAAAAAGTATTGCACATCGACAAAATACGTAATTACTTAGTAAATATAGAAATAACTCTGTATTTATAAAATTTTTTTGATATACTAAATATGTATAATATCGAGGTCGACAAAAAGGTGGTGTTTTAGCCGCTGATATTAAGATCTTGTGATTATACGG # Right flank : TAACACAAAAGGAGCCCCACCCATGAAACTTTTCCACAAAAAATCACACACCAACTACAACCCAACCGAGAAAACACCTGTCATCAAATGCAGCATCTGCACAGGAGAGCAGGTAGCTGGATTTCAGGACAATGCCACTAAGGCATTTGAGGACATTATGCTGATACAAGATGCATCGGATCTTGCACATTTCCGGGAGATGTATGGTATAATCGGAGATATTAAGAAAATCTATTAAGAGTATTACAGAAACCGAAAGGATACACTATGTCATACATAACTACTTACACTGGAAAACATTTTGATCCGGTCAATCCGGATGCATCCCTTCTTTGCATCGAAGATATCGCACATGCATTGTCGCTTCTGTGCCGCGGAAACGGGCACGTACAGACCTTTTTCTCGGTCGGACAGCATTGCATTGCCTGTGCGAAGGAAGCGCAGGCACGGGGACTGTCGGCACGTCTGGTTCTGGCATGTCTGCTACATGATGCAAGTGA # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATAGATTTAACCAGAATGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //