Array 1 92902-90008 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUNO01000023.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_123, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================================================================== ================== 92901 29 100.0 32 ............................. TCCTGCCGCAGGTCGGCCCAGCACTGCGTGCA 92840 29 100.0 32 ............................. CTCGGCTACACCTTCGACGTCGGCGCCACCGC 92779 29 96.6 32 ............................A CTCACGACGGCGATCCGGCTGCAGTAGTGGCT 92718 29 96.6 32 ...............A............. TCATCGTGTCGCAGGACGATCTCGCGCCCGAG 92657 29 96.6 32 ............................C ACGTTGATCGCGGCCTCGACCTCGGCCATGTC 92596 29 96.6 32 .........A................... GCGTTCTCTTCCGCGGTCGGCCCTGTCACCGA 92535 29 100.0 33 ............................. GTGCGGCCGTTGTTGCCGAACGAGTTGAAGTTG 92473 29 96.6 91 ............................C AACGACCTTCAGGTGCTGAAGGTGCCGACGTTGTGCTCCCCGCGCGCGGGGTGGTCCGGCCAACTACACCTGCCCGTCGGTGTGGGAGGAC 92353 29 100.0 32 ............................. GAAGGCACGACGGCGCAGGCGTGGCCGAGCGG 92292 29 89.7 26 .......................A.AT.. TCGTCTCGGCCAGTAGCCGGTCCGAG CCC [92267] 92234 29 100.0 32 ............................. GATCCGGCCGAGCCGTCGGTCATCCTTCCCCT 92173 29 100.0 32 ............................. CTGCTGATCGCGATCCCGGCGCGGATAGGTCT 92112 29 93.1 32 ..A.........................C TACGTGCAGGGCGACTACTCGCTGGACGGCAT 92051 29 93.1 32 .....................A..T.... CGGAAGATGATGCCGACGGCGGTGTTCGCGAC 91990 29 100.0 32 ............................. TACGCCGCCGACGCGTTGACCTCGGCCTGCGT 91929 29 93.1 32 ......T.....................C AACACCTACGTGCAGATCCGCACTGAGGTCAT 91868 29 96.6 32 ............................C TACGAGGCGACCGGGGTCGTCGTGCACCCGTA 91807 29 93.1 32 ...T.......A................. TAGCTGCTCTGGTGGCCGTCCGTCGCGGTGAC 91746 29 96.6 32 ...........A................. TCGATGCCGGTCTGGTGCCGCAGAGAGGCCGC 91685 27 93.1 32 ............--............... ATCTGGAGGATGCCGCCGCCGGCGCCCTGGAT 91626 29 89.7 32 ......T...........C.........T CATCGGGGTGCCCGGCGCCGCATTCAAGCTCT 91565 29 96.6 32 ............................C GTCTTGGTGACGGCCGATGTGGTGCGGAAAAT 91504 29 96.6 32 ............................C TGGGCCGCGCCGGTCGGCGCGAAGTCGCAGCA 91443 29 96.6 32 A............................ GCGGGGGCGTCAATGAGGCTCCGCTACGCGGA 91382 29 86.2 32 ...T.....T...............C..C TCGGCGATGACCCTGGCGCACGCGTTCGGCTA 91321 29 93.1 33 ...T.......................G. GCATCGCGCAGCGGCGAGTGTGGTTGCGGCATC 91259 29 96.6 33 ............................C GGTTCCACCTACGCGATCGCCACACGCCTCGGG 91197 29 96.6 32 ............................T GAGGGATACGTGCCGTATGACAAGGGGATCGA 91136 29 89.7 33 ............T........A......C TGGCGCCGATCGAGGTCCCCGTTGATGTCGAAC 91074 29 89.7 33 .........A.A................C ATGTTGTCGTTCTTGACGTCGATGGTGTCCCAG 91012 29 100.0 32 ............................. GGCTGGTGGGAGGGCAACGTTCCGGTGCCCGG 90951 29 89.7 32 ...G.................A......T CTCAGCCGGCATGACGTTGTGCACCACGTTCG 90890 29 93.1 32 ...G.....A................... TACGGGCGGGGCGTTCCCGGCGTGAAGCTGTT 90829 29 100.0 30 ............................. TTGTCCAGGTCGGTCTGTCCACCCTCAACG 90770 29 82.8 32 .C.TG.T..C................... GATCAGGCTGACGCGACACCGGGTGCGGTCAA 90709 29 96.6 32 ............T................ GGCGGACCGGCGAACATCCCGGCCTGCCGCAA 90648 29 89.7 32 A....T...............A....... GTCACGACGCACTGTGCTCCGGCCGCCGGGCC 90587 29 96.6 32 ........................A.... CGCTGGTCGCTGCGCTACCACCTGGCTGGCGC 90526 29 93.1 32 ........................A...C TACGGCGACAACATCTACTACCTGGAAACTCA 90465 29 100.0 32 ............................. ACCTACGGCATCACCGAAGAGCAGTACTGGGC 90404 28 93.1 32 ........-..A................. GGCTCCGCCGTCATCCAGGTGGTCCTCGCGGA 90344 29 96.6 32 .....................A....... GCCGGCCCTTCGATGATGCGCTCGGCGGCCTC 90283 29 100.0 32 ............................. GTTCCGATTCCGGCGGTCGACGAGACGTCGCG 90222 29 96.6 32 .............A............... TAGCTGCTCTGGGGGCCGTCCGTCGCGGTGAC 90161 29 96.6 32 .......T..................... TTCCCGTGCGGAATCGCTTGGTTCGAGGACAT 90100 29 93.1 36 .C.T......................... CTGGCGAACCCGTGAGGGAGAGGCCCCGCCACGTGT 90035 28 79.3 0 T.TT......-.T............C... | ========== ====== ====== ====== ============================= =========================================================================================== ================== 47 29 94.9 33 GTGCTCCCCGCGCGAGCGGGGGTGGTCCG # Left flank : AGGTCGGGAGCGTGAGGTAGCTGACCTGCTCGTGTCGGACGTAGTCGGCGCTGCCCGGCGGTGGCCACTCGTCCTGGAAACAGGGGCACGCCTTGCCGACGTCATGGAGGCCGGCGAGGAACGCGACGAAGCGGCGGGCGTCCTGGTCATCGAGGCCGAGTTGCGCCACCAACCAGGCCCGCACACCGGGCGCGAGATGCTTGTCCCACAACACATACGCGGCGGCAGCCGTGTCGATCAGGTGGTGCAGCAACGGGTAGTCGCTAGGCAAGTCTTTCCGCTTCCCCCACAGCTTCGGCACCCGGCCTATTCAAGCACGATGTTCATCGGCTCGTCGCTGAGGTGGGTACCGTCGTGTCCTGCCGGCCCGCACCTCTCGGCTAGTTGTTTGACAACTCAACAGAAGGCGTGAAATCCGGGGCGGGCAGTGCTTGGGGACGTGGCTGTATGAAGTGATGCTGTTTGATGGTCGAGCACTGCAAAATCGCAGGTCAGAAAGC # Right flank : TGCGCGCCGGCCACCAGGTTCACCGCGAACGGCGTGTTCCGGGTTCCCGTGACACTATGCGTGACGCGAAACGGGGTCAACAGGGGGCATGGCATACCGAAGAGCTTGATCATGTTGAAAAGTTGCAGGTAGTTGGTGGTGCCGATGACAACAGTCCGACTTTTAATCTGTCGGTCCAAGGACATGAAGACCCGCAAGGGTCGGCCGGCTTCCTATAACATCGAGTACTTCCTGGTGCACGCGCCGGTGGCCTAGACGATTCCCATGAGCGTGTCAACGGATCGCCGATCTTGGTTCTGGCACGCTTTCCGGTCTTACCCTGCTCGGGCTTGTCCGGGCGGACCAGGTCCGGCTCACCAGCCGGGGAGCGGACCTCAACGTTATCGAACCACGACGCGGCAACGGGGGGGCAATGCGGGGCGGACCCGGACCGACTCGTTCTTACCCCGCCTGACCAGACGAGACAGATCCCAGTCCTCGTCTTCACTGAGGCGGCGGGC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.09, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 552094-550153 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUNO01000006.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =================================================================================================================================================================================================================== ================== 552093 26 100.0 51 .......................... ATGGCACCGCCCTGCCCCAGACGCATCAGGATCAGGTCAAGTCCAGAATCA 552016 26 100.0 49 .......................... AGGACGGTGACGCCTGCGCCGATCTCCAGCAGCATCATGTCCAGAATCA 551941 26 100.0 49 .......................... TTGATGGCCATGATGAGGCGGGTGAGCGCCGAGCGCTGGCCCAGAAGAA 551866 26 88.5 47 .....T..................CT GAACCGGCCGGTGGGCAGAATCTCGAAGACGGGGCGGCCCGGAAGGA 551793 26 84.6 47 .C........G....T....G..... GGTGACGATGGAGGGCGGCGTGCCGTCCATGAGGAGTCCAGATGGGC 551720 24 80.8 46 --C.C...................G. GGGTGAGCGTTGAAGGGCGCGTAGTAGACCTGGCGGTCCAGATGGG 551650 25 92.3 47 ...........-........G..... CTCCGCACCCATGGGTAACGGAGCGATCGCCGCGTCGTCCAGATGGG 551578 26 92.3 49 ...............T....T..... CAGAGGCGGCCGGTCGAACCGCCGGCTCAGCGGTTCGAGTGCAGAAGCG 551503 26 88.5 54 .....A.T............G..... TCCTGCTCGAGGCTGTCGAGCACGCCGGCGGCAAAAGTCTTGCGTTCGGAAGTG 551423 26 88.5 50 ............A.......G..C.. TGGCTCCGGGATGGGGTTCAGTAGCTTGAAAGTCCTTCAAGTCAGAATGG 551347 26 96.2 50 .......................G.. CCGAGCTTTCCGTCGTGGTTCTGACGCTTGGCGAGGATAGTTGAGATGGG 551271 26 76.9 33 T.....A........T....C...TT CCGCCTGTTGGAACTCGGCTGAGTAGAAGTCGA Deletion [551213] 551212 26 76.9 45 GT......A.....A.C.....G... GTCAGAAGATGTGCCATCGGGACTTGAACCAGCCGTCAAGATGGA 551141 26 76.9 211 ...........CT.....GCC..G.. CGGAGGATGACTCGAACCGGAGGATGACCTGTCGACGGCGGTGTTGCGTGTGAGTGGAGACGCCGGCCGGCCGTCTCGCAGCGATAATCAAGGCGTCAGCGGATGCTGTGCACGTCCTGTCGGTGTGTGGGACGTGCTGGTCCAAGCTCGTCGCGATCGGCCAGGCCGAACGCGAGCCGGACAAGCCGTACTGGGCGGCGCTGTGACGCTA CT [551117] 550902 26 50.0 125 .T...TT.A.GGA..G..C.GTG..G ATCGAACACTGGTCTTGCGTGCAACGCCTGGGCCTGCGGCGATACGGTCCTCAGCGGCGAGAAACGATCATTCATGGCGTGGGTTGCAGGTCCGCGCGCCGCAGGCCTTCATTGCCGCTGGATGG 550751 26 69.2 1 A.G.T........A.G..CC....G. A TGGAT [550734] Deletion [550725] 550719 26 96.2 53 ..C....................... GTGAAGGTGATCATCCAGCCCTTGTCGCCATCCGGCCGGCGGGTTCAGAAGCA 550640 26 100.0 52 .......................... GCGTCAGTGCCGGCCCTGTGGATCGCATTGCCATCGAAGATGTCCAGAAGGA 550562 26 96.2 54 ............A............. GGTCAGGCCACCTTTCGGTGTCGTGCAGGAGAAGAAGACAAAGGTCCAGAAGCG 550482 26 100.0 50 .......................... CGTCACGTACTGACGCCAGCGACGCTCCGCGGAATTTCGGTCCATAAGCA 550406 26 96.2 50 ......A................... GAGCTTGGGTTGGCAGGAGGTTTCCTGCGATGGCCGCCCGTCCAGAAGCA 550330 26 100.0 50 .......................... GCACAGCTGCATGTTGCCCGTGTGGAACGTGACAGTCACGTTCAGAAGCA 550254 26 96.2 50 ...............T.......... GTGATGCACGTGGTGTCGCCACTGCCGTCGTTGCCGGCCGTCCAGAAGCG 550178 26 61.5 0 .A.............T.ACATTTG.A | ========== ====== ====== ====== ========================== =================================================================================================================================================================================================================== ================== 24 26 87.8 57 CGTCACGCCGAAGGGCGTATAGAAAC # Left flank : AATCGGGCCGCTGCCGGTGGGGCTGTCATGGCGCTGACTGTGCTGGTGTGTTACGACATTTCCGCCGATGGTGCCCGCGCTCGCGTCGCCGCCTATCTGCAACAGTGGGGCGATCGCCTGCAGCGCAGTGTGTTCGTCTGCGCGGTGGCGTCGGATGAGTTGGCAGAGGTGACCGGCCGTCTCGCGGCGATGATCGAGCCGTCCACCGATGCCGTGCACGTCCTGCCGGTGTGTGGGACGTGCTGGTCCAAGCTCGTCGCGATCGGCCAGGCCGAACGCGAGCCGGACAAGCCGTACTGGGCGGCGCTGTGACGCTACTCCATTCAGGGAGGGGGCTGTGAAGATCGAACACTGGTCTCGCGCGCAGTGCCTGGAGCTGCGGCGATACGGTCCTCAGCGGCGAGAAACGATCATCGATGGCGTGGAGTGCAGGTCCGCGTGTAGCAGGCCTTCATTGCTGCTGGTTGGAGGCTCGTCGAAGTAGGTAGGGTCCAGAAGCA # Right flank : TAATTCGGAACGCCACCGGTGCGGCACTTCGGTGCTGGCATCGAATGTACGGGTGACCAGGCGGGCTCCGCTGGACGACTGCAGGGCGACGATGGGAGACGGCATCTGGGCCGAGCCGGAACGGCCATGACTTCCGGTGATCGATCCGCCGGCACTATCAGTCCCCAATGGAACATTCGCTCGCTGTTGGAACGTGATCGTAAAGCGCATGGCGCACGCAACTGACCGGCGCCACCGCGGTAGCTGCGTCTGACAATAGCCTTCTGTGTGCCCGCTGGTCCGACCGTGTAGCGGTAGCGCCGAAGGATCACGATCACCACCGAGATACTGGATACTGACCTCGTGGCCGACCATTCGGACTCACACAACGATCTTTCCGGCGAAGTGCACGGTGCCGTCGTGCAGGCGGGCAGGATCGACCGCGTCGTCGTAACCGGTGCTGCACCGGCCGCGCGCCTGACTCCACGGCTGTTGCCACCGGCGATCCGCGACTTCGCGGG # Questionable array : NO Score: 3.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.39, 5:0, 6:0.25, 7:-1.39, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCACGCCGAAGGGCGTATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.70,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [14-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 2 555347-554635 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUNO01000006.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 555346 36 91.9 42 ....G...............G....-........... GCCCCCATCTCGGCGCTCATGATGAGCGTGCTGGCGGTGGCG 555268 37 94.6 43 ..T.................G................ TCCATATTGCGCGAAACCTGATGAATCGGAATACGAGCCGAAT 555188 37 100.0 36 ..................................... CCGAACGCCATCTGTACCAGTTTGCCCACTTCGTGG 555115 37 100.0 35 ..................................... GGGTAGGCGACGGCGATGCGAGCCAGGATGGTCTC 555043 37 100.0 39 ..................................... TCTCCGGCCAGTTCGTCGACGATGCGGGCGAGGTCGGGC 554967 37 97.3 37 ....................G................ TCTGCAGATGCCAGGTCATCAACAGGAACGGCCCCGC 554893 37 91.9 36 ...........T........G.....T.......... CGGCCAAGCGCTGTAATGGCGTAGCCTGCACTGAAG 554820 37 91.9 37 ...................TG..A............. CCGAGGTGAGTTGTGGCGCCGATCCAGTGAAGGGCCG 554746 37 94.6 38 ..T.................G................ CCGTTGTATGAGGCCAGCAGGTAGTGGCTGTTGGGATC 554671 37 91.9 0 ...A.....C..........G................ | ========== ====== ====== ====== ===================================== =========================================== ================== 10 37 95.4 38 GTCGATACGGGAGTCACGCCAGAGGGCGTATTGAAAC # Left flank : AGCCGGGCGCGGCGATGAGGTTGATACGGGAGTCACGGCGGAGGGCGTATTGAAACTAGCACTTGGCTCCGGCCAGCGTGCGGGCATAGTGAAGGCGATACGGGAGTCACGCCGCAGGGCGTATTGGAACGTCTTGCTGGCCAGCGGGGCGGGACGACGTCCTCGGCAAAGCTAGTCGAGATGGGCTCACGCCGACTGGCGTACCGGTCATGGTGAAGGGTGAGCTGTAGGTGGTCGACTGTTAGGGGCATTCGGGTGAGCGGGGTGTTCAGGCCGGTCGTGCCGTGTGAACCGGGCAAGCCGTAGCTAAACTGCACTGTCGGGTCTGCTCCCTTCGGAGAGGGGGTTGTGAAGATCGGATGCTGTTCTGGCGTGCATCGCCTGGGGCTGCGGCGATATGGTCTGAGGTGGCGGGAAGCGATCATCGACGGCTGTGGTTGTGGGTCCGCGTGCGGCGGGTTTTCGTTGTCGCTGGTTGGGGGCTCGCTGAAGTAGATAGG # Right flank : GTCATCGGGGTCTTGAACGGCGCCCGGTGTCGGTCGCGGTCGGCGGTTTCCGCGGACAGGTCCGCTTCGCCCTCGACGCGCCGGGCTTCGACCCAGCCGGAGTCAGCGCGCTGGCTCGGCTGGCCCCGTTCAGCGGGATCGGCGCCTACACCACCCGCGGCTTCGGCGGGGCGCGCCTGCTGCGACCCGACGGGCAGGCGGCACGCGTTGGGTGACCTGCTCGCCGCGGCCAGCGACCCAGGCTGCCTCGCCGAGGCGTGGCAGCAGGCCCTGGACGCCGACGCCGCGGACGAGCGGCTATCGGCGGGCGTGCGCCGGTTCGCCGCCGACGCCGACTAGAGTCTGGCCGAGCTAGCCGACCAACTCGCCACCGGGGCCTACCAGCCGGGTGTGCTCACCGAGCTGATGATCCCCAAGGCCGAAGGCGGCCACCGGGTCCTGCGTGTGCCGACCGTCCGGGACCGGATCGTGGAGCGTGCCGTGCTGTCGCAGCTGCGTCC # Questionable array : NO Score: 5.54 # Score Detail : 1:0, 2:0, 3:3, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGATACGGGAGTCACGCCAGAGGGCGTATTGAAAC # Alternate repeat : GTTGATACGGGAGTCACGCCGGAGGGCGTATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.30,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 3 555981-555717 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUNO01000006.1 Kutzneria buriramensis strain DSM 45791 Ga0104555_106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 555980 37 100.0 35 ..................................... GGTCAGGAAAACACGATTGCGAGCCCGTTCAGCAC 555908 37 94.6 44 ......T.G............................ GTCATCGGGGTCTTGAACCCGATGAAGCCGGGCGCGGCGATGAG 555827 37 91.9 37 ..T.....G.........G.................. TAGCACTTGGCTCCGGCCAGCGTGCGGGCATAGTGAA 555753 37 89.2 0 .G......G............C...........G... | ========== ====== ====== ====== ===================================== ============================================ ================== 4 37 93.9 39 GTCGATACTGGAGTCACGCCGGAGGGCGTATTGAAAC # Left flank : ACAAGCTGCATGATGGCTGTCGATACGGGAGTCACGCCGGAGGGTGTATTGAAACGTTGAAGGCGTTTCCGATGAACACGGACAACGCTCCCTGGCGATACGGGAGTCACGGAGGATGGCGTATAGGAACGTCTTGCTGGCCAGCGGGGCGGGACGACGTGCTCGGCAAAGCTAGTCGAGATGGGCTTCACGGCGGCGGGTGTGCTGGTCGAGGTGAAGGGTGAGTTGTAGGTGGTCGACTGTTAGGGTCATTCGGGTGAGCGGGGTGTTCAGGCCGGTCATGTCGTGTGGACCGGGCAAGCCATAGCTAAGCTGCACCGTCGGGGCTGCTCCGCTCGGGGAGGGTCTGTGAAGATCGGATACTGTTCTCGCGTGCATCGCCTGGGGCTGCGGCGATATGGTCTGAGGTGACGGGAAGCGATCATCGACGGCTGTGGTTGTGGGTCCTCGTGCGGCGGGTTTTCGTTGTCGCTGGTTGGGGGCTCGCTGAAGTAGATAGG # Right flank : GTCTTGCTGGCCAGCGGGGCGGGACGACGTCCTCGGCAAAGCTAGTCGAGATGGGCTCACGCCGACTGGCGTACCGGTCATGGTGAAGGGTGAGCTGTAGGTGGTCGACTGTTAGGGGCATTCGGGTGAGCGGGGTGTTCAGGCCGGTCGTGCCGTGTGAACCGGGCAAGCCGTAGCTAAACTGCACTGTCGGGTCTGCTCCCTTCGGAGAGGGGGTTGTGAAGATCGGATGCTGTTCTGGCGTGCATCGCCTGGGGCTGCGGCGATATGGTCTGAGGTGGCGGGAAGCGATCATCGACGGCTGTGGTTGTGGGTCCGCGTGCGGCGGGTTTTCGTTGTCGCTGGTTGGGGGCTCGCTGAAGTAGATAGGGTCGGTACGGGAGTCACGCCGGAGGCGTATTGAAACGCCCCCATCTCGGCGCTCATGATGAGCGTGCTGGCGGTGGCGGTTGATACGGGAGTCACGCCGGAGGGCGTATTGAAACTCCATATTGCGCGAA # Questionable array : NO Score: 3.75 # Score Detail : 1:0, 2:0, 3:3, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGATACTGGAGTCACGCCGGAGGGCGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA //