Array 1 1047-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZRI01000001.1 Petrotoga sp. 9T1HF07.CasAA.8.2 HF07.CasAA.8.2_contig_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ============================================= ================== 1046 26 96.2 45 ...........C.............. GACTTATCCAAAACCCTAGAGTTACCATGAAACTTTATGATGTGT 975 26 96.2 44 ...........C.............. CCTTGTTGAAACTCATAATTTTCCCTCCTCTAAAAATTCCGTGT 905 26 100.0 45 .......................... AAATCATCTTCAGTAAATACCCCATTGATGAGATCTTCCGGGTGT 834 26 100.0 44 .......................... AATCTTTCTTTTACCTTTGGATTTCTCCATATTAAATCTAGTGC 764 26 100.0 39 .......................... AAGCTTCTTCTCTGGCTAACACTGGGTCTGTTTTGGTGC 699 26 100.0 43 .......................... ATTTCTCATCCCACTAATGATTCTATATAGTGGAAATGGGTGC 630 26 100.0 41 .......................... TTATACAGTTCTATTGTTCTTTTCTTTCTTCTTACTCGTGT 563 26 96.2 41 ...........C.............. TTGGATAATAGCAGCTACAATTAGTGGATCTATTCGGGTGT 496 26 92.3 41 A..........C.............. TCCTCACTTACCTCTGTATAATATTGAGTCACCCTCTGTGT 429 26 96.2 43 ...........C.............. TTTTTTAAAACTGTGATTATAATATTTAGTTCCTCACTTGTAT 360 26 100.0 43 .......................... CGGGAATCTCTTCCCTGTCTACTGGTGTTACTTTTATGGGTAT 291 26 100.0 41 .......................... TAAGCAACAACCATAGCATATACAACGCTTCCTAATTGTAT 224 26 100.0 41 .......................... AAGACTGAACGCATTTCCCAAATACAACATACTATAAGTAT 157 26 100.0 39 .......................... TGAGATAAACTTCTTCTACTTCATAGTTTCCGAAAGTAT 92 26 100.0 39 .......................... TGAGATAAACTTCTTCTACTTCATAGTTTCCGAAAGTAT 27 26 84.6 0 ......................TTTT | ========== ====== ====== ====== ========================== ============================================= ================== 16 26 97.6 42 CTATCCTACCTTTAAGGAATAAAAAC # Left flank : AATAATTTTGTTGATCTGTGCAAAAAGACTTTTCGTAATGCTTCTGAAAAAACTTCCAAATTCTCATTTGCGTAGCAAATGACGTTTGTGTATTAGCCTACCTCTAAGGAATAAGTTTTGCCGACTTGTGCAAAACGTTTTTTGCTGTTTCTTGCAAAGCGTTTTATTTGTAATGCTCTAAAAACTCTTTCCTTATTCTCGTTTGCCCCACAAACGACGTTCCACGCAAATGACGATCAACCTCAAGTTAAACGAGAAGATCGCCTAGATTAACTTCCGATAAACTAACTTTCATCTATTTAACCTATAACAGAAAATGATATAAAAAAACGTCTGTCGACCTCCAATAAGGTAAAAAACCCAGGGGATCGACAGACAAGTGTTAAAAGTCACAAGGCTTGTTCCATAAGCCTTTGAATTGATTTTTAACATTTCCTCAAAGTTTTGCTTGACAAATGTAATTTTTTATGATACACTTTTTATCGTGAACCTATGGGTGT # Right flank : TG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATCCTACCTTTAAGGAATAAAAAC # Alternate repeat : CTATCCTACCTCTAAGGAATAAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.23%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 12109-11807 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZRI01000040.1 Petrotoga sp. 9T1HF07.CasAA.8.2 HF07.CasAA.8.2_contig_55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 12108 30 100.0 38 .............................. TTCTATGCTCTTGAACTTCCACTCCCACACATCATAAC 12040 30 100.0 36 .............................. TGATACCAATGGTAATAATAGAATATTCGATTTTTA 11974 30 100.0 38 .............................. AGACCTAGATTTTTCATAATAGCTAATCTAGTTCTTAC 11906 30 96.7 40 ...............C.............. AATAACTTAGTTGGGCTTTATACGCAATTACGTGATGCTG 11836 30 80.0 0 ...T...........C..........TTTT | ========== ====== ====== ====== ============================== ======================================== ================== 5 30 95.3 38 GTGCCTATCCTACCTTTAAGGAATAAAAAC # Left flank : AGTTTCCGAAAGTATCTATCCTACCTTTAAGGAATAATTTTGCTGCTTTGTGCAAAAGCTCTTTCATAGTGCTTTAGAAACTATTTCTTATCCTCGTTTGCCCCGCAAACGACGTTCGTGCCTTAGCTTACCTTTAAGGAATAAATTTTGCTGTTCTGTGCAAAACGTTTTTTTCATAATGCTTTAGAAACAATTTCCATCTCCTCATTTACGAAGTAAATAAACAATTCTTCGGTCCCTATAACTTCACTTTAAAAAAATAAGCAAATCAGTTTAACTTCCAACTAACTAATATTTATATATTTAACCTGAAATAGAAAAAGATATAAAAAAATGTCTGTCGACCTCCAATAAGGTAAAAACTCCAGGGGATCGACAGACAAGTGCTAAAAAGCACAAGGCTTATTCAATAGGTATTTAAATCGATTTTTAACAATTTCTCAAAGTTTTGCTTGACAAATGTAATTTTTTATGATACACTTTTTATCGTGAACCTATGG # Right flank : GCTGCCTTTTGCAAAACGCTTTTCATAATGCTTTAGAAACTCTTCCCTGACCTCGTTTGCTTTGCAAACGATGTTCTACGTAAATGACTTATAAAGCCGAACCAAAGATAAGTGAATAGGACAACCAGCATAAAATTCTTTCTCCTAAAGAAATTTGAGAGTTGTTAGGAATATTGAAGCAATCCCTCTTTTTTGCTAAAAAAGAGGGTTGATTTAATGTTTATTTAATTCATGCATGCTGTATTCAATTTACACAAGAGGCGATATTAAGATAGGGAAGATTAGGGAAGAAGCAAAAAAAGTAATGGATGAAACGGCAGAATTAGTAATATCGATCGCTAAGAAGCTGAATAATAAGGGAATGGGAAAGGTGATTGGCGATATAGGGTGGAGCTCTCCCCATTCCTTGAGGGATAAGATGTTGGAGAAAAAATTTTTTATCCTTGTTAAATTCCTCTTATATTTTCTGGTAGTAATATTGATTGTTTTTTAATAACGCA # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCTATCCTACCTTTAAGGAATAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 39592-38917 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZRI01000027.1 Petrotoga sp. 9T1HF07.CasAA.8.2 HF07.CasAA.8.2_contig_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================================================== ================== 39591 30 100.0 37 .............................. TCGTTGAAAAGAGTTAAAAAGTGATTTCTTCAATACC 39524 30 100.0 38 .............................. TCTTTCAGGCATGTTCATTTCGTTTATTTTTAATTCCA 39456 30 100.0 36 .............................. AATTTTCTTATAAAACTTTTCAATAGTCTTAGATTC 39390 30 100.0 37 .............................. AATTTACTTTCAGTACATATTTCGTAGCTTCAATATC 39323 30 100.0 36 .............................. CTGTGTTTTGAAGGTCAAGAAGAAAACTCCCGATAA 39257 30 100.0 39 .............................. CCAAATTTCCCCATCATCGACACATGTATAGTTGCATCG 39188 30 100.0 36 .............................. CATGCTGGAGCCACCAATCCTAATGGGTTGTTCTTT 39122 30 86.7 79 .........................G.TTT TGTTAGTTTGTGCAAAGAGCGTTTTCGTAATGCTTTTTAATAAATTTCCTAATTCTCATTTGCGAAGCAAATGACGTCT 39013 30 93.3 35 ....T..G...................... AACCTGAAACCTTCAGGTAATGTTACACAACCTTC T [39007] 38947 30 96.7 0 .......G...................... | T [38941] ========== ====== ====== ====== ============================== =============================================================================== ================== 10 30 97.7 42 GTGTCTATCCTACCTTTAAGGAATAAAAAC # Left flank : TCAAGAGTATTTAAAAGAGTATGTTAAGTCTTACAAAGAGTTTGAAGACCCAAATTTTTTTGATACTCTACCTAAAGAAATTAAAAGCTACGCATATTGGAATATTTTCAATCGTTTAACTTATGAGTTTTACAAAGAAAATAATTTAGAATATAATTGGGACCTTGAGGCAGAACTTGAGGATGGAGGTTATATTTCTGATACACCAGTTGTATATGATATCAATGAAGATTATCAAGATCTTGAAGACTCAAATTTTGATGGTCTAATCAACGATGAGGAAGATTTTTAAGGGGTTTATTTAACCTAAAACAGAAAGTGATATAAAAAAAACGTCTGTCGACCTCCAATAGGGTAAAAAACCCAGGGGATCGACAGACATGTGTTAAAAGTCACAAGCATTATTCCATGAGCTTTTGAATTGATTTTTAACATTTCCTCAAAGTTTTGCTTGACAATTGTAATTTTTTATGATACACTTTTTATCGTGAACCTATGGG # Right flank : TTTCCATGGGTTAATGAAAAAAGTTCGAATAAGCAAAAACTTTCGAAAATTTACAGTTTTTTTGGAAATGGTGTTTTTGATATATAATATTTTGTTGTTAATTCAAAAATCCTTTATTTTTAAAGATTTTCTTTGTTTTTTGAATTATGTAAATAAAAAAATTTGGAATATTTTATTTTAAAATAACTAATTTTAATGTATATTTTAACCTTCAAAACGAGTTTAATTTAAGGGTTTCAGGTGATCGCTGAAGCCTTTTTTTCTACATTTAACAATATTGTGAAGAATTGAATTAAACTTGTTTACAAGCACAAATATTTCAGGTTATAAAATGTATAAATAGTTTTTTTGGGCAAAAGTAGCGCAAAATTAATTATTTATCTAAAAAAGGAGATGAAATTATGGCAAATAAGAAACACCCATTCAAAACTTTTGGTTCAACTATTGTAACAATATTAGAATTTATAGGAATAATGTTTGTTTTTCAATTAATAAGAGTT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.38, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCTATCCTACCTTTAAGGAATAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 53844-53276 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZRI01000027.1 Petrotoga sp. 9T1HF07.CasAA.8.2 HF07.CasAA.8.2_contig_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 53843 30 100.0 36 .............................. CAAAATAAAAAAAGAGAGCTGTGTTTCTAGCTCTCT 53777 30 96.7 37 ...........................G.. TTCTTACTTCTTCGTTGGGCTGGATCGTTTCTAGGAA 53710 30 100.0 35 .............................. TAATCCTTTCTCTATCACCCCATTGGATATACTCC 53645 30 100.0 37 .............................. TCATCACGGATGGATACAGAGAATTAAAATCATGATA 53578 30 100.0 38 .............................. ACATATAGTTGCCAAATTGTTCAAACGTCGCAAAATTT 53510 30 100.0 41 .............................. GTTCTATATTTAATTTTTCTAACAAACCTGAACTTTCTCCA 53439 30 100.0 36 .............................. ATCGTCCTACCTCTTAATGCTTCCTGCTCTGTTTCA 53373 30 93.3 38 .......CT..................... GAGAACGACTGCCAGTTCCCATAGAGTGTATAACCTAA 53305 30 80.0 0 .......CT.......C..........TTT | ========== ====== ====== ====== ============================== ========================================= ================== 9 30 96.7 37 GTGTCTATCCTACCTTTAAGGAATAAAAAC # Left flank : TTTATCGTAAAAGAATAGATTTCGAAGAACAGAGTTCATCCTTACAAAAGACAACTCAAACAAAAGATCGAATTGTTGAAGAAAACATAATAAAACCCAATCAGACATCTAATCAAAAAGATCCAACACCAAGCAAAATAAAAGATATATTAGGAAATAATAGAATTCCTTGCCCCAAGATCTGCATCATATCCAATTTCTAACAAATATGGAACCTAAATATCCATCAATTTTGCTTATATAACTTTAAGTTAAGCGAAAACACTGTTTAACTTAACTTCTAATAAACAAATATTTATCTATTTAACCTAAAAAAGAAAATGATATAAAAAAATGTCTGTCGACCTCCAATAGGATAAAAAACCCAGGGGATCGACAGACAAGTGTTAAAAGTCACAAGGCTTATTCCATAAGCCTTTGAATTGATTTTTAACATTTTCTCAAAGTTTTGCTTGACAATTGTAATTTTTTATGATACACTTTTTATCGTGAACCTATGG # Right flank : TGCCGACTTGTGCAAAAAGATTTTTCAAAACGCCTTTATTAGGCGTTTTTTTATTTTAGGCATTAGCAAATTGATAAGCATATATAACATTGATTTAATAGTGAAAAGACTAAAGCATGGCATAACTGCCTCCTAATAACATGAAGGTATTTGAGATATCAACATCTATTTGAAAAGGTGGTGGTTAACAGGTTTATGGTCATAGTTAGCAAAAAATCTGAATCAGGCAAAAGGAGGTTGAAGTTTGGTGGCTAATTTTTTCCCTTCGTTTGAGGGAATAAGAGAGATGAAAGTCCCTCCCACTAAAGGTGAATGGGAGTTTCTAAATTTTTTGAAAGCATATCCAGACAAGGAATTAGAAGTCTTTTTTCAACCAAATATAAACGGAGATAATCCAGACATTGTATTAATGAAAAAATCGCATGGAGTATTAATTATAGAAGTGAAAGACTGGAATTTAGATAATTACTACATTACTCCCCCTAACAATACCAACGACA # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCTATCCTACCTTTAAGGAATAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 3 56815-56201 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZRI01000027.1 Petrotoga sp. 9T1HF07.CasAA.8.2 HF07.CasAA.8.2_contig_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================================================================== ================== 56814 27 100.0 41 ........................... AACGAAAAAATTTATTTTTTGGTATATATATTATAGTTCAA 56746 27 100.0 40 ........................... AACTAGGATTAAAAAACGCTTTAAGCCTAATAGACTCTTG 56679 27 100.0 41 ........................... AACATGAATATATTGAGATGGTAAAGTCAGAGTTGCAATTG 56611 27 100.0 39 ........................... AACCTTGTCTTTGTAAATTATCTGGCAGATTTAACAAAT 56545 27 100.0 41 ........................... AACTAGGCTTCTTTTAATATTTCTTCTATTATTCTTTGTGG 56477 27 100.0 42 ........................... AACATGAACTTAGTCAGTAGTTGAACGAAACCGAAACAAAGG 56408 27 96.3 44 ...............T........... AACACTAATGGGCTAAGAGTGTTGGTCTTTACAATTTTAAACCC 56337 27 85.2 83 ....A..........T.........CT TTTGCTGATCTGTGCAAAAATGCTTCTTTCATAATGTTTTAGAAATTTTTTCCTAACCTCGTTTGCCCCGCAAACGACGCGTG 56227 27 77.8 0 TGTAT..........T........... | ========== ====== ====== ====== =========================== =================================================================================== ================== 9 27 95.5 46 GTGTCTATCCTACCTCTAAGGAATAAA # Left flank : AGAGAAAGATTATCGACACTTAGTTTTATAAAAAGCCTCATCTTATCACCTCGTGTATATTATAACACTTAGGAAAAAAATCTAAAATAAGATAAGAGAAAAGGTTATTGGAAGCTTACGGTTTTTCTCTATAATCCTGATGTTCGATCTGATTTTCACAACAATTTTCTTTTAAAATTGTTGATAGTGAGTATGACAAAAATACCAATTCACTAAGAAAGATGGCATTTTGTTGCCCATACAACCCCAAGTTAAACAAAAAAGCCGCCTAGATTAACTTCCAATAAACTAATATTTATCTATTTAACCTAAAACAGAAAATGAAAAAAAAAAACGTCTGTCGACCTCCAATAGGGTAAAAAACTCAGGGGATCGACAGACAAGTGTTAAAAGTCACAAGGCTTATTCCATAAGCCTTTGAATTGATTTTTAACATTTTCTCAAAGTTTTGCTTGACAAATGTAATTTTTTATGATACACTTTTTATCGTGAACCTATGG # Right flank : TTTTGCTGATCTCTGCAAAACGCCTTTTCAAAATGCTTTAGAATTTTTTCCTAACCTCGTTTGCCCCGCAAACGACGCTTATGTCTTAGCCTACCTTTAAGGAATAAAAAAGTATCTTCGTGTCCTACTACGGACATCGCTTCTTCTGGTATCTATCCTACCTATGAGGAACGAAATAAATTTTGCTACTTACTGGCGAAAACTTTTTTCATAATTCCTTAGAAACCCTTTCCAAACCCTCATTTACTTAGCAAACTACGCCTAAGTTTTTACCTGCTTATAAGAAAAAATAATAATAAACTATAAAGCTTTATATGAGAATGCGTTATGAAAAGGATGGTTTGTCATCTGGTTTTTGTGTATGAAAAAGTCCGGAATTTCTAAAAAATTGGAGTGATTCCTTTGCTTAAACCAACTTTAGAGCAGAAGGCTATTGTAGATGCAAATTTTAAAGACATTCTTCTTGTTAATGCTTATGCAGGAACTGGCAAAACTTCAAC # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.49, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCTATCCTACCTCTAAGGAATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //